RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 MKRN1Q9UHC7 482 aaKnown RBP26.55■■□□□ 1.84
UPK3B-203ENST00000394849 CAMTA2O94983 1202 aa26.54■■□□□ 1.84
UPK3B-203ENST00000394849 L3MBTL3Q96JM7 780 aaPredicted RBP26.54■■□□□ 1.84
UPK3B-203ENST00000394849 CLEC4GQ6UXB4 293 aa26.53■■□□□ 1.84
UPK3B-203ENST00000394849 CCDC24Q8N4L8 307 aa26.53■■□□□ 1.84
UPK3B-203ENST00000394849 CNTNAP1P78357 1384 aa26.52■■□□□ 1.84
UPK3B-203ENST00000394849 PRDM10Q9NQV6 1147 aa26.52■■□□□ 1.84
UPK3B-203ENST00000394849 CACNA1SQ13698 1873 aa26.51■■□□□ 1.83
UPK3B-203ENST00000394849 PER1O15534 1290 aaPredicted RBP26.51■■□□□ 1.83
UPK3B-203ENST00000394849 A1BGP04217 495 aa26.51■■□□□ 1.83
UPK3B-203ENST00000394849 DZIP3Q86Y13 1208 aaKnown RBP26.51■■□□□ 1.83
UPK3B-203ENST00000394849 PASKQ96RG2 1323 aa26.5■■□□□ 1.83
UPK3B-203ENST00000394849 CCDC93Q567U6 631 aa26.5■■□□□ 1.83
UPK3B-203ENST00000394849 ZNF652Q9Y2D9 606 aa26.5■■□□□ 1.83
UPK3B-203ENST00000394849 BCORQ6W2J9 1755 aa26.5■■□□□ 1.83
UPK3B-203ENST00000394849 CEMIPQ8WUJ3 1361 aa26.49■■□□□ 1.83
UPK3B-203ENST00000394849 KIF7Q2M1P5 1343 aa26.49■■□□□ 1.83
UPK3B-203ENST00000394849 U2SURPO15042 1029 aaKnown RBP26.49■■□□□ 1.83
UPK3B-203ENST00000394849 RGL2O15211 777 aa26.49■■□□□ 1.83
UPK3B-203ENST00000394849 POTEIP0CG38 1075 aa26.49■■□□□ 1.83
UPK3B-203ENST00000394849 POTEJP0CG39 1038 aa26.49■■□□□ 1.83
UPK3B-203ENST00000394849 NBPF5PQ86XG9 351 aaPredicted RBP26.49■■□□□ 1.83
UPK3B-203ENST00000394849 TAF1DQ9H5J8 278 aaPredicted RBP26.49■■□□□ 1.83
UPK3B-203ENST00000394849 NPR1P16066 1061 aa26.48■■□□□ 1.83
UPK3B-203ENST00000394849 CC2D1BQ5T0F9 858 aaKnown RBP26.48■■□□□ 1.83
UPK3B-203ENST00000394849 C7orf43Q8WVR3 580 aa26.48■■□□□ 1.83
UPK3B-203ENST00000394849 AIDAQ96BJ3 306 aa26.48■■□□□ 1.83
UPK3B-203ENST00000394849 TMEM88BA6NKF7 163 aa26.47■■□□□ 1.83
UPK3B-203ENST00000394849 BTBD11A6QL63 1104 aa26.47■■□□□ 1.83
UPK3B-203ENST00000394849 NPC1L1Q9UHC9 1359 aa26.46■■□□□ 1.83
UPK3B-203ENST00000394849 CTCFP49711 727 aaPredicted RBP26.46■■□□□ 1.83
UPK3B-203ENST00000394849 COL3A1P02461 1466 aaPredicted RBP26.46■■□□□ 1.83
UPK3B-203ENST00000394849 KLRG2A4D1S0 409 aaPredicted RBP26.45■■□□□ 1.82
UPK3B-203ENST00000394849 FOXN1O15353 648 aa26.45■■□□□ 1.82
UPK3B-203ENST00000394849 FKBP4Q02790 459 aaKnown RBP eCLIP26.45■■□□□ 1.82
UPK3B-203ENST00000394849 TPTE2Q6XPS3 522 aa26.45■■□□□ 1.82
UPK3B-203ENST00000394849 RTKN2Q8IZC4 609 aa26.45■■□□□ 1.82
UPK3B-203ENST00000394849 PNMA8AQ86V59 439 aaPredicted RBP26.44■■□□□ 1.82
UPK3B-203ENST00000394849 HACL1Q9UJ83 578 aa26.44■■□□□ 1.82
UPK3B-203ENST00000394849 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
UPK3B-203ENST00000394849 SNRPA1P09661 255 aaKnown RBP26.42■■□□□ 1.82
UPK3B-203ENST00000394849 ALDH1B1P30837 517 aa26.41■■□□□ 1.82
UPK3B-203ENST00000394849 VEGFBP49765 207 aa26.41■■□□□ 1.82
UPK3B-203ENST00000394849 USP16Q9Y5T5 823 aa26.41■■□□□ 1.82
UPK3B-203ENST00000394849 EAPPQ56P03 285 aaPredicted RBP26.4■■□□□ 1.82
UPK3B-203ENST00000394849 EPHX2P34913 555 aa26.39■■□□□ 1.82
UPK3B-203ENST00000394849 CLEC11AQ9Y240 323 aa26.39■■□□□ 1.82
UPK3B-203ENST00000394849 KCNQ3O43525 872 aa26.38■■□□□ 1.81
UPK3B-203ENST00000394849 ZNF277Q9NRM2 450 aaPredicted RBP26.38■■□□□ 1.81
UPK3B-203ENST00000394849 WBP1LQ9NX94 342 aa26.38■■□□□ 1.81
UPK3B-203ENST00000394849 RTF1Q92541 710 aaKnown RBP26.37■■□□□ 1.81
UPK3B-203ENST00000394849 CFAP53Q96M91 514 aa26.37■■□□□ 1.81
UPK3B-203ENST00000394849 NIP7Q9Y221 180 aaKnown RBP eCLIP26.37■■□□□ 1.81
UPK3B-203ENST00000394849 ZNF541Q9H0D2 1346 aa26.37■■□□□ 1.81
UPK3B-203ENST00000394849 ADAMTSL1Q8N6G6 1762 aa26.36■■□□□ 1.81
UPK3B-203ENST00000394849 RASSF10A6NK89 507 aa26.36■■□□□ 1.81
UPK3B-203ENST00000394849 FZD9O00144 591 aa26.36■■□□□ 1.81
UPK3B-203ENST00000394849 PRKAR2BP31323 418 aa26.36■■□□□ 1.81
UPK3B-203ENST00000394849 GPC2Q8N158 579 aa26.36■■□□□ 1.81
UPK3B-203ENST00000394849 IARSP41252 1262 aaKnown RBP26.35■■□□□ 1.81
UPK3B-203ENST00000394849 CNTROBQ8N137 903 aa26.35■■□□□ 1.81
UPK3B-203ENST00000394849 PHACTR3Q96KR7 559 aa26.35■■□□□ 1.81
UPK3B-203ENST00000394849 MAP2K1Q02750 393 aaPredicted RBP26.34■■□□□ 1.81
UPK3B-203ENST00000394849 DEFB115Q30KQ5 88 aa26.34■■□□□ 1.81
UPK3B-203ENST00000394849 CC2D2BQ6DHV5 1058 aa26.34■■□□□ 1.81
UPK3B-203ENST00000394849 JDP2Q8WYK2 163 aa26.34■■□□□ 1.81
UPK3B-203ENST00000394849 RSPH6AQ9H0K4 717 aa26.34■■□□□ 1.81
UPK3B-203ENST00000394849 NUDCQ9Y266 331 aa26.34■■□□□ 1.81
UPK3B-203ENST00000394849 GTF2E1P29083 439 aaPredicted RBP26.33■■□□□ 1.81
UPK3B-203ENST00000394849 PIP4K2AP48426 406 aaPredicted RBP26.33■■□□□ 1.81
UPK3B-203ENST00000394849 GRIPAP1Q4V328 841 aa26.33■■□□□ 1.81
UPK3B-203ENST00000394849 SYNE4Q8N205 404 aa26.33■■□□□ 1.81
UPK3B-203ENST00000394849 PSMD1Q99460 953 aa26.33■■□□□ 1.81
UPK3B-203ENST00000394849 HTATSF1O43719 755 aaKnown RBP26.31■■□□□ 1.8
UPK3B-203ENST00000394849 LBX1P52954 281 aa26.31■■□□□ 1.8
UPK3B-203ENST00000394849 NYXQ9GZU5 481 aa26.31■■□□□ 1.8
UPK3B-203ENST00000394849 RNF123Q5XPI4 1314 aa26.31■■□□□ 1.8
UPK3B-203ENST00000394849 PRAMEF22A3QJZ6 481 aa26.3■■□□□ 1.8
UPK3B-203ENST00000394849 NBPF26B4DH59 902 aa26.29■■□□□ 1.8
UPK3B-203ENST00000394849 MAP1SQ66K74 1059 aaPredicted RBP26.29■■□□□ 1.8
UPK3B-203ENST00000394849 NBPF10Q6P3W6 841 aaKnown RBP26.29■■□□□ 1.8
UPK3B-203ENST00000394849 NBPF15Q8N660 670 aa26.29■■□□□ 1.8
UPK3B-203ENST00000394849 EIF6P56537 245 aaKnown RBP26.28■■□□□ 1.8
UPK3B-203ENST00000394849 CRY2Q49AN0 593 aa26.28■■□□□ 1.8
UPK3B-203ENST00000394849 WDR33Q9C0J8 1336 aaKnown RBP26.28■■□□□ 1.8
UPK3B-203ENST00000394849 LMOD1P29536 600 aaPredicted RBP26.27■■□□□ 1.8
UPK3B-203ENST00000394849 OLFM4Q6UX06 510 aa26.27■■□□□ 1.8
UPK3B-203ENST00000394849 MCM10Q7L590 875 aa26.27■■□□□ 1.8
UPK3B-203ENST00000394849 ABT1Q9ULW3 272 aaKnown RBP26.27■■□□□ 1.8
UPK3B-203ENST00000394849 FAM177BA6PVY3 158 aa26.26■■□□□ 1.79
UPK3B-203ENST00000394849 ERVV-1B6SEH8 477 aa26.26■■□□□ 1.79
UPK3B-203ENST00000394849 HSPA8P11142 646 aaKnown RBP26.25■■□□□ 1.79
UPK3B-203ENST00000394849 TAF7Q15545 349 aaPredicted RBP26.25■■□□□ 1.79
UPK3B-203ENST00000394849 DDX21Q9NR30 783 aaKnown RBP eCLIP26.25■■□□□ 1.79
UPK3B-203ENST00000394849 SNED1Q8TER0 1413 aa26.24■■□□□ 1.79
UPK3B-203ENST00000394849 U2AF1L5P0DN76 240 aaPredicted RBP26.24■■□□□ 1.79
UPK3B-203ENST00000394849 ECE1P42892 770 aa26.24■■□□□ 1.79
UPK3B-203ENST00000394849 U2AF1Q01081 240 aaKnown RBP eCLIP26.24■■□□□ 1.79
UPK3B-203ENST00000394849 CNGB1Q14028 1251 aaPredicted RBP26.24■■□□□ 1.79
UPK3B-203ENST00000394849 HLFQ16534 295 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms