RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 AK9Q5TCS8 1911 aa18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 GLRX3O76003 335 aaKnown RBP18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 SNRPA1P09661 255 aaKnown RBP18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 AIMP1Q12904 312 aaKnown RBP18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 SUCLG2Q96I99 432 aa18.67■□□□□ 0.58
UBE2D3-207ENST00000394801 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
UBE2D3-207ENST00000394801 IL25Q9H293 177 aa18.66■□□□□ 0.58
UBE2D3-207ENST00000394801 SGSM2O43147 1006 aa18.66■□□□□ 0.58
UBE2D3-207ENST00000394801 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
UBE2D3-207ENST00000394801 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
UBE2D3-207ENST00000394801 HSPA4P34932 840 aa18.65■□□□□ 0.58
UBE2D3-207ENST00000394801 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
UBE2D3-207ENST00000394801 NEURL1BA8MQ27 555 aa18.64■□□□□ 0.58
UBE2D3-207ENST00000394801 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.58
UBE2D3-207ENST00000394801 HSPA2P54652 639 aa18.64■□□□□ 0.58
UBE2D3-207ENST00000394801 COPS6Q7L5N1 327 aa18.64■□□□□ 0.58
UBE2D3-207ENST00000394801 FMNL2Q96PY5 1086 aa18.64■□□□□ 0.58
UBE2D3-207ENST00000394801 GZF1Q9H116 711 aaPredicted RBP18.64■□□□□ 0.58
UBE2D3-207ENST00000394801 GOLGA6L3A6NEY3 463 aa18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 NEXNQ0ZGT2 675 aa18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 TTC5Q8N0Z6 440 aa18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 XAGE3Q8WTP9 111 aa18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 BICC1Q9H694 974 aaKnown RBP18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 PA2G4Q9UQ80 394 aaKnown RBP18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
UBE2D3-207ENST00000394801 CUL4AQ13619 759 aa18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 TMX3Q96JJ7 454 aa18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 ECHDC1Q9NTX5 307 aa18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 ISY1Q9ULR0 285 aaKnown RBP18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 GOLGA6L22H0YM25 854 aa18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 MAP4K4O95819 1239 aaPredicted RBP18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 MYL6BP14649 208 aa18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 GCKRQ14397 625 aa18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 ZGPATQ8N5A5 531 aaKnown RBP18.63■□□□□ 0.57
UBE2D3-207ENST00000394801 ANKRD13DQ6ZTN6 518 aa18.62■□□□□ 0.57
UBE2D3-207ENST00000394801 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.62■□□□□ 0.57
UBE2D3-207ENST00000394801 RAD50Q92878 1312 aa18.62■□□□□ 0.57
UBE2D3-207ENST00000394801 GPATCH3Q96I76 525 aa18.62■□□□□ 0.57
UBE2D3-207ENST00000394801 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 SASH1O94885 1247 aa18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 CABP4P57796 275 aa18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 IFIT2P09913 472 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-207ENST00000394801 COL15A1P39059 1388 aa18.6■□□□□ 0.57
UBE2D3-207ENST00000394801 G3BP1Q13283 466 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBE2D3-207ENST00000394801 XRCC6P12956 609 aaKnown RBP eCLIP18.6■□□□□ 0.574e-17■□□□□ 10.6
UBE2D3-207ENST00000394801 PKP1Q13835 747 aa18.6■□□□□ 0.57
UBE2D3-207ENST00000394801 GLI3P10071 1580 aa18.6■□□□□ 0.57
UBE2D3-207ENST00000394801 MYD88Q99836 296 aa18.59■□□□□ 0.57
UBE2D3-207ENST00000394801 ZDHHC9Q9Y397 364 aa18.59■□□□□ 0.57
UBE2D3-207ENST00000394801 AACSQ86V21 672 aa18.58■□□□□ 0.56
UBE2D3-207ENST00000394801 RUFY2Q8WXA3 655 aa18.58■□□□□ 0.56
UBE2D3-207ENST00000394801 EAF2Q96CJ1 260 aaPredicted RBP18.58■□□□□ 0.56
UBE2D3-207ENST00000394801 ERBB4Q15303 1308 aa18.58■□□□□ 0.56
UBE2D3-207ENST00000394801 MRE11P49959 708 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 KLHL40Q2TBA0 621 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 EVI5LQ96CN4 794 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 NKX1-1Q15270 411 aaPredicted RBP18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 PRDM11Q9NQV5 511 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 LAMB4A4D0S4 1761 aa18.57■□□□□ 0.56
UBE2D3-207ENST00000394801 ERVV-2B6SEH9 535 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 KIAA1211Q6ZU35 1233 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 SNX14Q9Y5W7 946 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 COPRSQ9NQ92 184 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 STRCQ7RTU9 1775 aa18.56■□□□□ 0.56
UBE2D3-207ENST00000394801 RABL6Q3YEC7 729 aaPredicted RBP18.55■□□□□ 0.56
UBE2D3-207ENST00000394801 PLBD2Q8NHP8 589 aa18.55■□□□□ 0.56
UBE2D3-207ENST00000394801 UPF3BQ9BZI7 483 aaKnown RBP18.55■□□□□ 0.56
UBE2D3-207ENST00000394801 TOM1L2Q6ZVM7 507 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 LMBRD1Q9NUN5 540 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 RFX5P48382 616 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 KCNB2Q92953 911 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 TTC14Q96N46 770 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 ARFGEF2Q9Y6D5 1785 aa18.54■□□□□ 0.56
UBE2D3-207ENST00000394801 HIP1O00291 1037 aa18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 RASEFQ8IZ41 740 aa18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 SNRKQ9NRH2 765 aa18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 BRD1O95696 1058 aa18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 PIP4K2AP48426 406 aaPredicted RBP18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 CASP7P55210 303 aa18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 CCDC8Q9H0W5 538 aaPredicted RBP18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 DDX49Q9Y6V7 483 aaKnown RBP18.53■□□□□ 0.56
UBE2D3-207ENST00000394801 UBR2Q8IWV8 1755 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms