RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 PLPPR3Q6T4P5 718 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 PI4KAP1Q8N8J0 262 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 PA2G4Q9UQ80 394 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 DOT1LQ8TEK3 1739 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 CPA1P15085 419 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 ZNF445P59923 1031 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 K7ELQ4 463 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 DCCP43146 1447 aa9.57□□□□□ -0.88
GAPVD1-207ENST00000394105 LAMA2P24043 3122 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 LTV1Q96GA3 475 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 SLC4A9Q96Q91 983 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 USP16Q9Y5T5 823 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 ZSCAN23Q3MJ62 389 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 PNNQ9H307 717 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 GADD45BO75293 160 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 MRE11P49959 708 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 BABAM1Q9NWV8 329 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 SLC39A6Q13433 755 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 IL1RAPL2Q9NP60 686 aa9.56□□□□□ -0.88
GAPVD1-207ENST00000394105 TSC1Q92574 1164 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 SUCLG2Q96I99 432 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 CPDO75976 1380 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 ZMYND15Q9H091 742 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 CHD4Q14839 1912 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 DISP2A7MBM2 1401 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 LMOD3Q0VAK6 560 aa9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 EAF2Q96CJ1 260 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-207ENST00000394105 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 EDC3Q96F86 508 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 KDM4FA0A1W2PPD8 638 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 APBB1O00213 710 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 CDC45O75419 566 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 KLHL40Q2TBA0 621 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 NEDD4P46934 1319 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 HSPA4P34932 840 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 AKAP4Q5JQC9 854 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 NDUFB9Q9Y6M9 179 aa9.54□□□□□ -0.88
GAPVD1-207ENST00000394105 ESCO1Q5FWF5 840 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 ANKRD24Q8TF21 1146 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 EID1Q9Y6B2 187 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 TNS3Q68CZ2 1445 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 MAP4K4O95819 1239 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 FUCA2Q9BTY2 467 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 NPHP3Q7Z494 1330 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 ZNF496Q96IT1 587 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 ZNF609O15014 1411 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 PHKG2P15735 406 aa9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-207ENST00000394105 AMPHP49418 695 aa9.52□□□□□ -0.88
GAPVD1-207ENST00000394105 SGSM2O43147 1006 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 BRD1O95696 1058 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 NECTIN1Q15223 517 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 SLC4A10Q6U841 1118 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 ZNF589Q86UQ0 364 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 MX1P20591 662 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 TMX3Q96JJ7 454 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 BECN1Q14457 450 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 SNX14Q9Y5W7 946 aa9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 ZNF646O15015 1829 aaPredicted RBP9.52□□□□□ -0.89
GAPVD1-207ENST00000394105 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 C17orf53Q8N3J3 647 aaPredicted RBP9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 CDK5RAP2Q96SN8 1893 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 SPATA31A3Q5VYP0 1347 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 HOXB7P09629 217 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 FOXO4P98177 505 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 ANKLE2Q86XL3 938 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 TACC3Q9Y6A5 838 aa9.51□□□□□ -0.89
GAPVD1-207ENST00000394105 GNAI2P04899 355 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 RABL6Q3YEC7 729 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 OFD1O75665 1012 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 PTPN12Q05209 780 aaKnown RBP9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 HDGFL1Q5TGJ6 251 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 BRINP3Q76B58 766 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 ATG9AQ7Z3C6 839 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 FAM227BQ96M60 508 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 RAD50Q92878 1312 aa9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 FKBP5Q13451 457 aaPredicted RBP9.5□□□□□ -0.89
GAPVD1-207ENST00000394105 ZNF790Q6PG37 636 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 MAP3K2Q9Y2U5 619 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 CACNA1SQ13698 1873 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 A0A0D9SFI3 127 aa9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 ZNF500O60304 480 aaPredicted RBP9.49□□□□□ -0.89
GAPVD1-207ENST00000394105 KCNF1Q9H3M0 494 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms