RNA–Protein interactions for RNA: ENST00000393230.6

NRF1-204, Transcript of nuclear respiratory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRF1, Length 3,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1-204ENST00000393230 TOM1L2Q6ZVM7 507 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
NRF1-204ENST00000393230 CYP27B1O15528 508 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 NFATC2IPQ8NCF5 419 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
NRF1-204ENST00000393230 ABCA3Q99758 1704 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 MCCP23508 829 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
NRF1-204ENST00000393230 POLA2Q14181 598 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 SKOR2Q2VWA4 1001 aaPredicted RBP13.21□□□□□ -0.29
NRF1-204ENST00000393230 PPP1R42Q7Z4L9 355 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.29
NRF1-204ENST00000393230 AOX1Q06278 1338 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.29
NRF1-204ENST00000393230 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.29
NRF1-204ENST00000393230 CABP4P57796 275 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
NRF1-204ENST00000393230 MPNDQ8N594 471 aa13.21□□□□□ -0.29
NRF1-204ENST00000393230 FSD2A1L4K1 749 aa13.21□□□□□ -0.3
NRF1-204ENST00000393230 SLC39A6Q13433 755 aa13.21□□□□□ -0.3
NRF1-204ENST00000393230 NUCB2P80303 420 aa13.2□□□□□ -0.3
NRF1-204ENST00000393230 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
NRF1-204ENST00000393230 UNC5CLQ8IV45 518 aa13.2□□□□□ -0.3
NRF1-204ENST00000393230 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
NRF1-204ENST00000393230 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
NRF1-204ENST00000393230 NEXNQ0ZGT2 675 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 MTX1Q13505 466 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 LARP1Q6PKG0 1096 aaKnown RBP13.19□□□□□ -0.3
NRF1-204ENST00000393230 PALD1Q9ULE6 856 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 CCDC9Q9Y3X0 531 aaKnown RBP13.19□□□□□ -0.3
NRF1-204ENST00000393230 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
NRF1-204ENST00000393230 KIF1BPQ96EK5 621 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 C5P01031 1676 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
NRF1-204ENST00000393230 STAP2Q9UGK3 403 aa13.19□□□□□ -0.3
NRF1-204ENST00000393230 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
NRF1-204ENST00000393230 IL2RBP14784 551 aa13.18□□□□□ -0.3
NRF1-204ENST00000393230 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
NRF1-204ENST00000393230 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
NRF1-204ENST00000393230 ERBB4Q15303 1308 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 ESPNB1AK53 854 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 PDIA6Q15084 440 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 TMX3Q96JJ7 454 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 DDIT3P35638 169 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 KCNJ4P48050 445 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 EVA1CP58658 441 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
NRF1-204ENST00000393230 GRM8O00222 908 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
NRF1-204ENST00000393230 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
NRF1-204ENST00000393230 ESYT1Q9BSJ8 1104 aa13.16□□□□□ -0.3
NRF1-204ENST00000393230 UTYO14607 1347 aa13.16□□□□□ -0.3
NRF1-204ENST00000393230 SYCE3A1L190 88 aa13.16□□□□□ -0.3
NRF1-204ENST00000393230 CPA1P15085 419 aa13.16□□□□□ -0.3
NRF1-204ENST00000393230 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
NRF1-204ENST00000393230 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
NRF1-204ENST00000393230 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
NRF1-204ENST00000393230 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
NRF1-204ENST00000393230 SIL1Q9H173 461 aa13.15□□□□□ -0.3
NRF1-204ENST00000393230 MYL6BP14649 208 aa13.15□□□□□ -0.3
NRF1-204ENST00000393230 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.31
NRF1-204ENST00000393230 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
NRF1-204ENST00000393230 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
NRF1-204ENST00000393230 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
NRF1-204ENST00000393230 COPS6Q7L5N1 327 aa13.14□□□□□ -0.31
NRF1-204ENST00000393230 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
NRF1-204ENST00000393230 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
NRF1-204ENST00000393230 PTMSP20962 102 aa13.14□□□□□ -0.31
NRF1-204ENST00000393230 CHMLP26374 656 aa13.14□□□□□ -0.31
NRF1-204ENST00000393230 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
NRF1-204ENST00000393230 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
NRF1-204ENST00000393230 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
NRF1-204ENST00000393230 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
NRF1-204ENST00000393230 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
NRF1-204ENST00000393230 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
NRF1-204ENST00000393230 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
NRF1-204ENST00000393230 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
NRF1-204ENST00000393230 CHMP3Q9Y3E7 222 aa13.13□□□□□ -0.31
NRF1-204ENST00000393230 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
NRF1-204ENST00000393230 GPATCH3Q96I76 525 aa13.13□□□□□ -0.31
NRF1-204ENST00000393230 ARID3AQ99856 593 aa13.13□□□□□ -0.31
NRF1-204ENST00000393230 IL25Q9H293 177 aa13.12□□□□□ -0.31
NRF1-204ENST00000393230 DIAPH3Q9NSV4 1193 aa13.12□□□□□ -0.31
NRF1-204ENST00000393230 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
NRF1-204ENST00000393230 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
NRF1-204ENST00000393230 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
NRF1-204ENST00000393230 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
NRF1-204ENST00000393230 UBR2Q8IWV8 1755 aa13.11□□□□□ -0.31
NRF1-204ENST00000393230 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms