RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FAM50BQ9Y247 325 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 PRKAB1Q9Y478 270 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 TERF1P54274 439 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 ARHGAP4P98171 946 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 ZNF354CQ86Y25 554 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.44□□□□□ -1.7
XRN1-202ENST00000392981 ADAM32Q8TC27 787 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 DNAJC7Q99615 494 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 OCEL1Q9H607 264 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 ZNF408Q9H9D4 720 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 DAAM1Q9Y4D1 1078 aa4.44□□□□□ -1.7
XRN1-202ENST00000392981 CD53P19397 219 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 USP4Q13107 963 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 CNNM4Q6P4Q7 775 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 SLC43A3Q8NBI5 491 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 FRMD6Q96NE9 622 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 GNL3LQ9NVN8 582 aaKnown RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 NUDT7P0C024 238 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 KMT5BQ4FZB7 885 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 METTL16Q86W50 562 aaKnown RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 PPM1EQ8WY54 764 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 TMEM134Q9H6X4 195 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 IRS4O14654 1257 aaPredicted RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 APPP05067 770 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 TSGA10IPQ3SY00 556 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 MAP9Q49MG5 647 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 MEI1Q5TIA1 1274 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 RNF20Q5VTR2 975 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 ZNF280DQ6N043 979 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 C16orf46Q6P387 395 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 PNISRQ8TF01 805 aaKnown RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 PURBQ96QR8 312 aaKnown RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 PPFIA4O75335 1185 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 DHX8Q14562 1220 aaKnown RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.43□□□□□ -1.7
XRN1-202ENST00000392981 KIAA0825Q8IV33 1275 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 ADAM33Q9BZ11 813 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 SNTG2Q9NY99 539 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 SEPT9Q9UHD8 586 aaPredicted RBP4.43□□□□□ -1.7
XRN1-202ENST00000392981 CLSPNQ9HAW4 1339 aa4.43□□□□□ -1.7
XRN1-202ENST00000392981 SOCS7O14512 581 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 C7P10643 843 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 DAB2P98082 770 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 DIEXFQ68CQ4 756 aaKnown RBP4.42□□□□□ -1.7
XRN1-202ENST00000392981 CC2D1AQ6P1N0 951 aaPredicted RBP4.42□□□□□ -1.7
XRN1-202ENST00000392981 SLC10A4Q96EP9 437 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 LRGUKQ96M69 825 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 TREHO43280 583 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 ASMTLO95671 621 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 RACK1P63244 317 aaKnown RBP4.42□□□□□ -1.7
XRN1-202ENST00000392981 NBPF20Q3BBV1 942 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 NBPF14Q5TI25 921 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 EDEM1Q92611 657 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 ARMC5Q96C12 935 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 BICRAQ9NZM4 1560 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 ATF4P18848 351 aaPredicted RBP4.42□□□□□ -1.7
XRN1-202ENST00000392981 LIG1P18858 919 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 ARID5BQ14865 1188 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 C14orf80Q86SX3 495 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 ANKRD42Q8N9B4 389 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 GPR152Q8TDT2 470 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 JPH4Q96JJ6 628 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 PPP4R2Q9NY27 417 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 SLC4A7Q9Y6M7 1214 aa4.42□□□□□ -1.7
XRN1-202ENST00000392981 CALRP27797 417 aaKnown RBP4.41□□□□□ -1.7
XRN1-202ENST00000392981 FAM69CQ0P6D2 419 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 ORC1Q13415 861 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 MTA3Q9BTC8 594 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 DDX41Q9UJV9 622 aaKnown RBP4.41□□□□□ -1.7
XRN1-202ENST00000392981 POLIQ9UNA4 740 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 GJA5P36382 358 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 ATP6V1AP38606 617 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 TRAPPC10P48553 1259 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.41□□□□□ -1.7
XRN1-202ENST00000392981 RNPC3Q96LT9 517 aaKnown RBP4.41□□□□□ -1.7
XRN1-202ENST00000392981 AKAP2Q9Y2D5 859 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 NR1I2O75469 434 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 RETREG3Q86VR2 466 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 TNS4Q8IZW8 715 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 CCDC85AQ96PX6 553 aaPredicted RBP4.41□□□□□ -1.7
XRN1-202ENST00000392981 RBCK1Q9BYM8 510 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 PUF60Q9UHX1 559 aaKnown RBP4.41□□□□□ -1.7
XRN1-202ENST00000392981 TRIM6-TRIM34B2RNG4 842 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 KIF3BO15066 747 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 ETFBP38117 255 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 STK11IPQ8N1F8 1099 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 SIRPGQ9P1W8 387 aa4.41□□□□□ -1.7
XRN1-202ENST00000392981 BPNT1O95861 308 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 Q3C1V9 767 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 SNAP47Q5SQN1 464 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 AMOTL1Q8IY63 956 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 MYO1HQ8N1T3 1032 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 BSDC1Q9NW68 430 aaPredicted RBP4.4□□□□□ -1.7
XRN1-202ENST00000392981 CCDC85BQ15834 202 aaPredicted RBP4.4□□□□□ -1.7
XRN1-202ENST00000392981 TAS1R3Q7RTX0 852 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 CHPFQ8IZ52 775 aa4.4□□□□□ -1.7
XRN1-202ENST00000392981 TSPY2A6NKD2 308 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 TLR3O15455 904 aaKnown RBP4.4□□□□□ -1.71
XRN1-202ENST00000392981 TSPY3P0CV98 308 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms