RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 PI4KAP2A4QPH2 592 aa16.71■□□□□ 0.26
CCDC57-203ENST00000392343 PTGS1P23219 599 aa16.71■□□□□ 0.26
CCDC57-203ENST00000392343 PI4KAP1Q8N8J0 262 aa16.71■□□□□ 0.26
CCDC57-203ENST00000392343 RAB11FIP3O75154 756 aa16.7■□□□□ 0.26
CCDC57-203ENST00000392343 LIG1P18858 919 aa16.7■□□□□ 0.26
CCDC57-203ENST00000392343 TFIP11Q9UBB9 837 aaKnown RBP16.7■□□□□ 0.26
CCDC57-203ENST00000392343 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
CCDC57-203ENST00000392343 AOX1Q06278 1338 aa16.7■□□□□ 0.26
CCDC57-203ENST00000392343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
CCDC57-203ENST00000392343 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
CCDC57-203ENST00000392343 POLA2Q14181 598 aa16.7■□□□□ 0.26
CCDC57-203ENST00000392343 PLEKHG3A1L390 1219 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 IGSF3O75054 1194 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 KCNJ4P48050 445 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 ESF1Q9H501 851 aaKnown RBP16.69■□□□□ 0.26
CCDC57-203ENST00000392343 ZSCAN20P17040 1043 aaPredicted RBP16.69■□□□□ 0.26
CCDC57-203ENST00000392343 NLRP6P59044 892 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
CCDC57-203ENST00000392343 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 CHPF2Q9P2E5 772 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 FLT4P35916 1363 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
CCDC57-203ENST00000392343 KCNQ3O43525 872 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 GTF2F1P35269 517 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC57-203ENST00000392343 LRMPQ12912 555 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 NRBP1Q9UHY1 535 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 CYP46A1Q9Y6A2 500 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 XRN1Q8IZH2 1706 aaKnown RBP16.68■□□□□ 0.26
CCDC57-203ENST00000392343 CCDC192P0DO97 292 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 RGPD1P0DJD0 1748 aa16.68■□□□□ 0.26
CCDC57-203ENST00000392343 STK3Q13188 491 aa16.67■□□□□ 0.26
CCDC57-203ENST00000392343 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
CCDC57-203ENST00000392343 USP31Q70CQ4 1352 aa16.67■□□□□ 0.26
CCDC57-203ENST00000392343 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC57-203ENST00000392343 FAM227BQ96M60 508 aa16.67■□□□□ 0.26
CCDC57-203ENST00000392343 PDCL2Q8N4E4 241 aa16.67■□□□□ 0.26
CCDC57-203ENST00000392343 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
CCDC57-203ENST00000392343 CCDC186Q7Z3E2 898 aa16.66■□□□□ 0.26
CCDC57-203ENST00000392343 C14orf37Q86TY3 774 aa16.66■□□□□ 0.26
CCDC57-203ENST00000392343 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
CCDC57-203ENST00000392343 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
CCDC57-203ENST00000392343 KDRP35968 1356 aa16.66■□□□□ 0.26
CCDC57-203ENST00000392343 CHAF1AQ13111 956 aaPredicted RBP16.66■□□□□ 0.26
CCDC57-203ENST00000392343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
CCDC57-203ENST00000392343 VPS53Q5VIR6 699 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
CCDC57-203ENST00000392343 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 MRVI1Q9Y6F6 885 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 GLRX3O76003 335 aaKnown RBP16.65■□□□□ 0.26
CCDC57-203ENST00000392343 TYRO3Q06418 890 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 CLASRPQ8N2M8 674 aaKnown RBP16.65■□□□□ 0.26
CCDC57-203ENST00000392343 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 NUP62CLQ9H1M0 184 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
CCDC57-203ENST00000392343 RBM8AQ9Y5S9 174 aaKnown RBP16.65■□□□□ 0.26
CCDC57-203ENST00000392343 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
CCDC57-203ENST00000392343 DMTNQ08495 405 aa16.64■□□□□ 0.25
CCDC57-203ENST00000392343 MAP3K11Q16584 847 aa16.64■□□□□ 0.25
CCDC57-203ENST00000392343 ANO6Q4KMQ2 910 aa16.64■□□□□ 0.25
CCDC57-203ENST00000392343 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-203ENST00000392343 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-203ENST00000392343 FAM208AQ9UK61 1670 aaKnown RBP16.64■□□□□ 0.25
CCDC57-203ENST00000392343 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
CCDC57-203ENST00000392343 LTKP29376 864 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
CCDC57-203ENST00000392343 FAM200AQ8TCP9 573 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 RUFY2Q8WXA3 655 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 CCDC8Q9H0W5 538 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-203ENST00000392343 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 HOXC9P31274 260 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 KRT85P78386 507 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 CREB3L3Q68CJ9 461 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 AACSQ86V21 672 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 TNMDQ9H2S6 317 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-203ENST00000392343 NECTIN1Q15223 517 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 TRIM5Q9C035 493 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
CCDC57-203ENST00000392343 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 ZSCAN31Q96LW9 406 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 TECPR2O15040 1411 aa16.62■□□□□ 0.25
CCDC57-203ENST00000392343 NMIQ13287 307 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 CWF19L2Q2TBE0 894 aaKnown RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 LARP1Q6PKG0 1096 aaKnown RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 DDX11Q96FC9 970 aa16.62■□□□□ 0.25
CCDC57-203ENST00000392343 SH2B1Q9NRF2 756 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 C9orf78Q9NZ63 289 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-203ENST00000392343 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
CCDC57-203ENST00000392343 SETD1BQ9UPS6 1966 aaKnown RBP16.61■□□□□ 0.25
CCDC57-203ENST00000392343 CCDC171Q6TFL3 1326 aa16.61■□□□□ 0.25
CCDC57-203ENST00000392343 SPATA32Q96LK8 384 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms