RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SMARCA5O60264 1052 aaPredicted RBP22.89■■□□□ 1.26
SHANK1-203ENST00000391813 PLCD4Q9BRC7 762 aa22.89■■□□□ 1.26
SHANK1-203ENST00000391813 OGFRQ9NZT2 677 aa22.89■■□□□ 1.26
SHANK1-203ENST00000391813 NCKAP5LQ9HCH0 1330 aa22.89■■□□□ 1.25
SHANK1-203ENST00000391813 ANAPC15P60006 121 aa22.89■■□□□ 1.25
SHANK1-203ENST00000391813 TAF7Q15545 349 aaPredicted RBP22.88■■□□□ 1.25
SHANK1-203ENST00000391813 WASF1Q92558 559 aa22.88■■□□□ 1.25
SHANK1-203ENST00000391813 SRRTQ9BXP5 876 aaKnown RBP22.88■■□□□ 1.25
SHANK1-203ENST00000391813 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
SHANK1-203ENST00000391813 ZNF397Q8NF99 534 aaPredicted RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 HMGB1P09429 215 aaKnown RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CCAR1Q8IX12 1150 aaKnown RBP22.87■■□□□ 1.25
SHANK1-203ENST00000391813 ARHGAP45Q92619 1136 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CNNM1Q9NRU3 951 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CTR9Q6PD62 1173 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 ARFGAP3Q9NP61 516 aa22.87■■□□□ 1.25
SHANK1-203ENST00000391813 CCDC186Q7Z3E2 898 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 TTC12Q9H892 705 aaPredicted RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 CFAP74Q9C0B2 1584 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 SLU7O95391 586 aaKnown RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 NUTM1Q86Y26 1132 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 IFNL2Q8IZJ0 200 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 ZNF830Q96NB3 372 aaPredicted RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 CDK5RAP3Q96JB5 506 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 RNF123Q5XPI4 1314 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 TEX13AQ9BXU3 409 aaPredicted RBP22.86■■□□□ 1.25
SHANK1-203ENST00000391813 CEP131Q9UPN4 1083 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 ZFYVE16Q7Z3T8 1539 aa22.86■■□□□ 1.25
SHANK1-203ENST00000391813 KCNA6P17658 529 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 GIMAP6Q6P9H5 292 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 GJB2P29033 226 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 LRRC59Q96AG4 307 aaKnown RBP22.85■■□□□ 1.25
SHANK1-203ENST00000391813 ADGRL2O95490 1459 aa22.85■■□□□ 1.25
SHANK1-203ENST00000391813 PARD3Q8TEW0 1356 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 MYL6BP14649 208 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 U3KPZ7 1027 aaPredicted RBP22.84■■□□□ 1.25
SHANK1-203ENST00000391813 SKILP12757 684 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 ZSCAN25Q6NSZ9 544 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 KDM4AO75164 1064 aa22.84■■□□□ 1.25
SHANK1-203ENST00000391813 EIF5P55010 431 aaKnown RBP22.84■■□□□ 1.25
SHANK1-203ENST00000391813 MPHOSPH8Q99549 860 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 PTPRCP08575 1304 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 SLC3A2P08195 630 aaKnown RBP22.83■■□□□ 1.25
SHANK1-203ENST00000391813 FSIP1Q8NA03 581 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 NACAP1Q9BZK3 213 aa22.83■■□□□ 1.25
SHANK1-203ENST00000391813 CCDC69A6NI79 296 aa22.83■■□□□ 1.24
SHANK1-203ENST00000391813 GTF2A1P52655 376 aaPredicted RBP22.82■■□□□ 1.24
SHANK1-203ENST00000391813 CCDC57Q2TAC2 916 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 TAF4BQ92750 862 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 PPP1R1BQ9UD71 204 aaPredicted RBP22.82■■□□□ 1.24
SHANK1-203ENST00000391813 TCEAL9Q9UHQ7 104 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 RALGAPBQ86X10 1494 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 LMTK3Q96Q04 1460 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
SHANK1-203ENST00000391813 PTCD1O75127 700 aaKnown RBP22.81■■□□□ 1.24
SHANK1-203ENST00000391813 TTC39AQ5SRH9 613 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 DNAAF4Q8WXU2 420 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 SIL1Q9H173 461 aa22.81■■□□□ 1.24
SHANK1-203ENST00000391813 DNMT1P26358 1616 aaKnown RBP22.81■■□□□ 1.24
SHANK1-203ENST00000391813 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.81■■□□□ 1.24
SHANK1-203ENST00000391813 ZPR1O75312 459 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 SPA17Q15506 151 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 ZSCAN16Q9H4T2 348 aaPredicted RBP22.8■■□□□ 1.24
SHANK1-203ENST00000391813 TFIP11Q9UBB9 837 aaKnown RBP22.8■■□□□ 1.24
SHANK1-203ENST00000391813 TRPM2O94759 1503 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 C8orf76Q96K31 380 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 GNG11P61952 73 aa22.8■■□□□ 1.24
SHANK1-203ENST00000391813 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 PAFAH1B1P43034 410 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 TUBB4BP68371 445 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 GPATCH11Q8N954 259 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 CCDC43Q96MW1 224 aaKnown RBP22.79■■□□□ 1.24
SHANK1-203ENST00000391813 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 MNAT1P51948 309 aa22.79■■□□□ 1.24
SHANK1-203ENST00000391813 LARP1Q6PKG0 1096 aaKnown RBP22.79■■□□□ 1.24
SHANK1-203ENST00000391813 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 ZNF445P59923 1031 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 GABPB1Q06547 395 aaPredicted RBP22.78■■□□□ 1.24
SHANK1-203ENST00000391813 INTS4Q96HW7 963 aaKnown RBP22.78■■□□□ 1.24
SHANK1-203ENST00000391813 THUMPD2Q9BTF0 503 aaKnown RBP22.78■■□□□ 1.24
SHANK1-203ENST00000391813 MPRIPQ6WCQ1 1025 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 TAX1BP1Q86VP1 789 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 MYRIPQ8NFW9 859 aa22.78■■□□□ 1.24
SHANK1-203ENST00000391813 ABCA8O94911 1581 aa22.77■■□□□ 1.24
SHANK1-203ENST00000391813 SDSP20132 328 aa22.77■■□□□ 1.24
SHANK1-203ENST00000391813 SYCP1Q15431 976 aa22.77■■□□□ 1.24
SHANK1-203ENST00000391813 ZFYVE27Q5T4F4 411 aa22.77■■□□□ 1.23
SHANK1-203ENST00000391813 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
SHANK1-203ENST00000391813 SEC24BO95487 1268 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 NEFHP12036 1026 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 CHRNA2Q15822 529 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 TANGO6Q9C0B7 1094 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 RAD21O60216 631 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 ANO6Q4KMQ2 910 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 MCM10Q7L590 875 aa22.76■■□□□ 1.23
SHANK1-203ENST00000391813 DYDC1Q8WWB3 177 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms