RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
RNU1-28P-201ENST00000383861 POTEAQ6S8J7 498 aa11.1□□□□□ -0.63
RNU1-28P-201ENST00000383861 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
RNU1-28P-201ENST00000383861 CCNL1Q9UK58 526 aaPredicted RBP11.1□□□□□ -0.63
RNU1-28P-201ENST00000383861 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
RNU1-28P-201ENST00000383861 TJP1Q07157 1748 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 HMMRO75330 724 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 MEIS3Q99687 375 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 USP44Q9H0E7 712 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 BTAF1O14981 1849 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
RNU1-28P-201ENST00000383861 N4BP2Q86UW6 1770 aaPredicted RBP11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 PLSCR1O15162 318 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 TRIM37O94972 964 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 TRIM28Q13263 835 aaKnown RBP11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 TTLL7Q6ZT98 887 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 CCDC191Q8NCU4 936 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 MYD88Q99836 296 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 ZNF330Q9Y3S2 320 aaPredicted RBP11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 UTYO14607 1347 aa11.08□□□□□ -0.64
RNU1-28P-201ENST00000383861 BRWD3Q6RI45 1802 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 SBF2Q86WG5 1849 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 GRM8O00222 908 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 TCIRG1Q13488 830 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 PTF1AQ7RTS3 328 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 ANKRD44Q8N8A2 993 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 ARXQ96QS3 562 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 ZNF652Q9Y2D9 606 aa11.07□□□□□ -0.64
RNU1-28P-201ENST00000383861 RREB1Q92766 1687 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 IGHDP01880 384 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 IGKV5-2P06315 115 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 GCKRQ14397 625 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 CLEC4GQ6UXB4 293 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 ZBTB3Q9H5J0 574 aa11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
RNU1-28P-201ENST00000383861 LY75O60449 1722 aa11.05□□□□□ -0.64
RNU1-28P-201ENST00000383861 ADRA2BP18089 450 aa11.05□□□□□ -0.64
RNU1-28P-201ENST00000383861 ATP8B2P98198 1209 aa11.05□□□□□ -0.64
RNU1-28P-201ENST00000383861 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
RNU1-28P-201ENST00000383861 CEP85Q6P2H3 762 aa11.05□□□□□ -0.64
RNU1-28P-201ENST00000383861 ISCA1Q9BUE6 129 aa11.05□□□□□ -0.64
RNU1-28P-201ENST00000383861 COL15A1P39059 1388 aa11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 APBA3O96018 575 aa11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 HSP90B1P14625 803 aaKnown RBP11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 AK7Q96M32 723 aa11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 LRRFIP2Q9Y608 721 aaKnown RBP11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
RNU1-28P-201ENST00000383861 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 H7C1W4 665 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 GNPATO15228 680 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 NBPF7P0C2Y1 421 aaPredicted RBP11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 MTX1Q13505 466 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 PARP10Q53GL7 1025 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
RNU1-28P-201ENST00000383861 ZPR1O75312 459 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 SF3B2Q13435 895 aaKnown RBP11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 TXNRD1Q16881 649 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 TRAPPC3LQ5T215 181 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 DCTPP1Q9H773 170 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
RNU1-28P-201ENST00000383861 NUP188Q5SRE5 1749 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 SSFA2P28290 1259 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 HLFQ16534 295 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 PPP1R42Q7Z4L9 355 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 ZBTB38Q8NAP3 1195 aaPredicted RBP11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 FLAD1Q8NFF5 587 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 SSH3Q8TE77 659 aa11.01□□□□□ -0.65
RNU1-28P-201ENST00000383861 SRGAP3O43295 1099 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 RAB11FIP3O75154 756 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 RFC4P35249 363 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 KCNQ4P56696 695 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 POLA2Q14181 598 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 UBE3BQ7Z3V4 1068 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 CCDC125Q86Z20 511 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 SUCLG2Q96I99 432 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
RNU1-28P-201ENST00000383861 CDHR2Q9BYE9 1310 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms