RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 HOXB7P09629 217 aa14.52□□□□□ -0.08
GABPB1-203ENST00000380877 CCDC47Q96A33 483 aaKnown RBP14.52□□□□□ -0.08
GABPB1-203ENST00000380877 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.09
GABPB1-203ENST00000380877 ATP7BP35670 1465 aa14.52□□□□□ -0.09
GABPB1-203ENST00000380877 KINO60870 393 aaKnown RBP14.52□□□□□ -0.09
GABPB1-203ENST00000380877 NASPP49321 788 aaPredicted RBP14.52□□□□□ -0.09
GABPB1-203ENST00000380877 LMTK3Q96Q04 1460 aa14.52□□□□□ -0.09
GABPB1-203ENST00000380877 MAP3K12Q12852 859 aa14.52□□□□□ -0.09
GABPB1-203ENST00000380877 UBAC1Q9BSL1 405 aa14.52□□□□□ -0.09
GABPB1-203ENST00000380877 CROCC2H7BZ55 1655 aa14.51□□□□□ -0.09
GABPB1-203ENST00000380877 NUP133Q8WUM0 1156 aa14.51□□□□□ -0.09
GABPB1-203ENST00000380877 PA2G4Q9UQ80 394 aaKnown RBP14.51□□□□□ -0.09
GABPB1-203ENST00000380877 AATKQ6ZMQ8 1374 aa14.51□□□□□ -0.09
GABPB1-203ENST00000380877 C8orf34Q49A92 452 aa14.51□□□□□ -0.09
GABPB1-203ENST00000380877 CCDC83Q8IWF9 413 aa14.51□□□□□ -0.09
GABPB1-203ENST00000380877 ATP6V1AP38606 617 aa14.51□□□□□ -0.09
GABPB1-203ENST00000380877 LRRIQ1Q96JM4 1722 aa14.5□□□□□ -0.09
GABPB1-203ENST00000380877 CDC5LQ99459 802 aaKnown RBP14.5□□□□□ -0.09
GABPB1-203ENST00000380877 RNF17Q9BXT8 1623 aaKnown RBP14.5□□□□□ -0.09
GABPB1-203ENST00000380877 IKQ13123 557 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-203ENST00000380877 PPP1R1BQ9UD71 204 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-203ENST00000380877 TPM3P06753 285 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 SMARCC1Q92922 1105 aaPredicted RBP14.49□□□□□ -0.09
GABPB1-203ENST00000380877 MAP3K4Q9Y6R4 1608 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 DDX11Q96FC9 970 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 NAPBQ9H115 298 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 TMEM94Q12767 1356 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 A2ML1A8K2U0 1454 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 CDKL5O76039 1030 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 AK7Q96M32 723 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 PLEKHF1Q96S99 279 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 ANKIB1Q9P2G1 1089 aa14.49□□□□□ -0.09
GABPB1-203ENST00000380877 NPHP4O75161 1426 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-203ENST00000380877 LETM1O95202 739 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-203ENST00000380877 TPM1P09493 284 aa14.48□□□□□ -0.09
GABPB1-203ENST00000380877 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
GABPB1-203ENST00000380877 SH2B1Q9NRF2 756 aaPredicted RBP14.48□□□□□ -0.09
GABPB1-203ENST00000380877 LIMCH1Q9UPQ0 1083 aa14.48□□□□□ -0.09
GABPB1-203ENST00000380877 PDIA4P13667 645 aaKnown RBP14.48□□□□□ -0.09
GABPB1-203ENST00000380877 TSR1Q2NL82 804 aaKnown RBP14.48□□□□□ -0.09
GABPB1-203ENST00000380877 DDX46Q7L014 1031 aaKnown RBP14.48□□□□□ -0.09
GABPB1-203ENST00000380877 JMYQ8N9B5 988 aa14.48□□□□□ -0.09
GABPB1-203ENST00000380877 USP6P35125 1406 aa14.48□□□□□ -0.09
GABPB1-203ENST00000380877 TCEAL9Q9UHQ7 104 aa14.48□□□□□ -0.09
GABPB1-203ENST00000380877 IL15P40933 162 aaPredicted RBP14.47□□□□□ -0.09
GABPB1-203ENST00000380877 ME1P48163 572 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 ATP2B2Q01814 1243 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 FERMT3Q86UX7 667 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 SLC52A2Q9HAB3 445 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 PLEKHM2Q8IWE5 1019 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 IL17REQ8NFR9 667 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 MINDY4BA8MYZ0 360 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 TPM2P07951 284 aa14.47□□□□□ -0.09
GABPB1-203ENST00000380877 KIAA0232Q92628 1395 aa14.46□□□□□ -0.09
GABPB1-203ENST00000380877 TRPM1Q7Z4N2 1603 aa14.46□□□□□ -0.09
GABPB1-203ENST00000380877 USP19O94966 1318 aa14.46□□□□□ -0.09
GABPB1-203ENST00000380877 HMGB1P09429 215 aaKnown RBP14.46□□□□□ -0.09
GABPB1-203ENST00000380877 NAT10Q9H0A0 1025 aaKnown RBP14.46□□□□□ -0.09
GABPB1-203ENST00000380877 DZIP3Q86Y13 1208 aaKnown RBP14.46□□□□□ -0.09
GABPB1-203ENST00000380877 ESYT1Q9BSJ8 1104 aa14.46□□□□□ -0.09
GABPB1-203ENST00000380877 TSPY26PQ9H489 355 aa14.46□□□□□ -0.09
GABPB1-203ENST00000380877 ZNF213O14771 459 aa14.46□□□□□ -0.1
GABPB1-203ENST00000380877 RFC4P35249 363 aa14.46□□□□□ -0.1
GABPB1-203ENST00000380877 SPHKAPQ2M3C7 1700 aa14.46□□□□□ -0.1
GABPB1-203ENST00000380877 RBM5P52756 815 aaKnown RBP eCLIP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 EIF4A1P60842 406 aaKnown RBP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 ATP2B3Q16720 1220 aa14.45□□□□□ -0.1
GABPB1-203ENST00000380877 CCDC152Q4G0S7 254 aa14.45□□□□□ -0.1
GABPB1-203ENST00000380877 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 LARP6Q9BRS8 491 aaKnown RBP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 NBPF5PQ86XG9 351 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 SPATA32Q96LK8 384 aa14.45□□□□□ -0.1
GABPB1-203ENST00000380877 ZNF496Q96IT1 587 aaPredicted RBP14.45□□□□□ -0.1
GABPB1-203ENST00000380877 KDM2BQ8NHM5 1336 aa14.45□□□□□ -0.1
GABPB1-203ENST00000380877 ZNF521Q96K83 1311 aa14.45□□□□□ -0.1
GABPB1-203ENST00000380877 DZIP1Q86YF9 867 aaKnown RBP14.44□□□□□ -0.1
GABPB1-203ENST00000380877 TRMT2AQ8IZ69 625 aaKnown RBP14.44□□□□□ -0.1
GABPB1-203ENST00000380877 CFAP45Q9UL16 551 aa14.44□□□□□ -0.1
GABPB1-203ENST00000380877 NIP7Q9Y221 180 aaKnown RBP eCLIP14.44□□□□□ -0.1
GABPB1-203ENST00000380877 OLFM4Q6UX06 510 aa14.44□□□□□ -0.1
GABPB1-203ENST00000380877 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
GABPB1-203ENST00000380877 SSFA2P28290 1259 aa14.43□□□□□ -0.1
GABPB1-203ENST00000380877 TTC41PQ6P2S7 1318 aa14.43□□□□□ -0.1
GABPB1-203ENST00000380877 UQCRFS1P1P0C7P4 283 aa14.43□□□□□ -0.1
GABPB1-203ENST00000380877 USP5P45974 858 aa14.43□□□□□ -0.1
GABPB1-203ENST00000380877 ARHGEF25Q86VW2 580 aa14.43□□□□□ -0.1
GABPB1-203ENST00000380877 ZSCAN29Q8IWY8 852 aaPredicted RBP14.43□□□□□ -0.1
GABPB1-203ENST00000380877 PLBD2Q8NHP8 589 aa14.42□□□□□ -0.1
GABPB1-203ENST00000380877 METTL22Q9BUU2 404 aaPredicted RBP14.42□□□□□ -0.1
GABPB1-203ENST00000380877 CDCA7Q9BWT1 371 aaPredicted RBP14.42□□□□□ -0.1
GABPB1-203ENST00000380877 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
GABPB1-203ENST00000380877 TNMDQ9H2S6 317 aa14.42□□□□□ -0.1
GABPB1-203ENST00000380877 HMG20BQ9P0W2 317 aa14.42□□□□□ -0.1
GABPB1-203ENST00000380877 PCMTD1Q96MG8 357 aaPredicted RBP14.42□□□□□ -0.1
GABPB1-203ENST00000380877 SETDB2Q96T68 719 aa14.42□□□□□ -0.1
GABPB1-203ENST00000380877 TNPO1Q92973 898 aaKnown RBP14.41□□□□□ -0.1
GABPB1-203ENST00000380877 A1BGP04217 495 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 CCDC192P0DO97 292 aa14.41□□□□□ -0.1
GABPB1-203ENST00000380877 KCNQ3O43525 872 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms