RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 TRIM21P19474 475 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 NUDT16Q96DE0 195 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 A0A087WZG4 1122 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 NEBLO76041 1014 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 CKAP4Q07065 602 aaKnown RBP19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 SPECC1LQ69YQ0 1117 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 DNAI2Q9GZS0 605 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 DNAAF4Q8WXU2 420 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 IVLP07476 585 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 NUCB1Q02818 461 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 TDRD12Q587J7 1177 aaKnown RBP19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 MYD88Q99836 296 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 STAMBPO95630 424 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 MAP3K12Q12852 859 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 GDPD2Q9HCC8 539 aa19.73■□□□□ 0.75
SNAPC3-202ENST00000380821 AMPD3Q01432 767 aa19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 NOLC1Q14978 699 aaKnown RBP eCLIP19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 C11orf95C9JLR9 678 aaPredicted RBP19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 IGHDP01880 384 aa19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 TICAM2Q86XR7 235 aa19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 GSTTP1A0A1W2PQM5 241 aa19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 CCDC12Q8WUD4 166 aaPredicted RBP19.72■□□□□ 0.75
SNAPC3-202ENST00000380821 HSF2BPO75031 334 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 ECHDC1Q9NTX5 307 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 STARD3NLO95772 234 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 MTIF2P46199 727 aaKnown RBP19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 RBM5P52756 815 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 SNX21Q969T3 373 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 AMOTQ4VCS5 1084 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 HYPKQ9NX55 129 aa19.71■□□□□ 0.75
SNAPC3-202ENST00000380821 MPHOSPH10O00566 681 aaKnown RBP19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 CAVIN4Q5BKX8 364 aa19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 CCDC8Q9H0W5 538 aaPredicted RBP19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 GNG11P61952 73 aa19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 CEP112Q8N8E3 955 aa19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 SCAF11Q99590 1463 aaKnown RBP19.7■□□□□ 0.74
SNAPC3-202ENST00000380821 NLRP5P59047 1200 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 HLTFQ14527 1009 aaKnown RBP eCLIP19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 HS1BP3Q53T59 392 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 CCDC102BQ68D86 513 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 CCDC61Q9Y6R9 512 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 MAATS1Q7Z4T9 603 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 MINDY4BA8MYZ0 360 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 GOLIM4O00461 696 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 SRRTQ9BXP5 876 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 BIN1O00499 593 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 NF2P35240 595 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 CATIPQ7Z7H3 387 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 PLCD3Q8N3E9 789 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 TMX3Q96JJ7 454 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 NEK1Q96PY6 1258 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 CTAGE1Q96RT6 745 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 TFIP11Q9UBB9 837 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 IFIT3O14879 490 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 SLC5A1P13866 664 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 TRERF1Q96PN7 1200 aa19.69■□□□□ 0.74
SNAPC3-202ENST00000380821 IFI16Q16666 785 aaKnown RBP19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 SPECC1Q5M775 1068 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 XRCC6P12956 609 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 HCLS1P14317 486 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 MKNK2Q9HBH9 465 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 RMND1Q9NWS8 449 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 TTF1Q15361 905 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 CALML4Q96GE6 196 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 ABCF2Q9UG63 623 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 POLR3DP05423 398 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 ZSCAN29Q8IWY8 852 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 RALGAPBQ86X10 1494 aa19.68■□□□□ 0.74
SNAPC3-202ENST00000380821 ANAPC15P60006 121 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 FAM200AQ8TCP9 573 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 F6X3S4 739 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 GTPBP4Q9BZE4 634 aaKnown RBP19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 LRRC27Q9C0I9 530 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 ZKSCAN5Q9Y2L8 839 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 IARSP41252 1262 aaKnown RBP19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 HOOK3Q86VS8 718 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 ARHGAP45Q92619 1136 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
SNAPC3-202ENST00000380821 GIMAP6Q6P9H5 292 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 KLHL34Q8N239 644 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 KIF14Q15058 1648 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 JADE2Q9NQC1 790 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 IBSPP21815 317 aaPredicted RBP19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 ANO6Q4KMQ2 910 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 DNA2P51530 1060 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 FLIIQ13045 1269 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 CTNNBL1Q8WYA6 563 aaPredicted RBP19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 PIK3R4Q99570 1358 aa19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 RPRD2Q5VT52 1461 aaKnown RBP19.66■□□□□ 0.74
SNAPC3-202ENST00000380821 IFIT5Q13325 482 aaKnown RBP19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 DDX12PQ92771 950 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 UBA5Q9GZZ9 404 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms