RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 ERCC6L2Q5T890 1561 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 ERC2O15083 957 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 TRIM29Q14134 588 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 PDE3AQ14432 1141 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 DZIP1LQ8IYY4 767 aaKnown RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 ZNF444Q8N0Y2 327 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 PANK2Q9BZ23 570 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 HYPKQ9NX55 129 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 BLMP54132 1417 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 MAP3K19Q56UN5 1328 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 ECE1P42892 770 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 DOK7Q18PE1 504 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 HSCBQ8IWL3 235 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 CCDC34Q96HJ3 373 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 NKTRP30414 1462 aaKnown RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 IRS4O14654 1257 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 EXOSC9Q06265 439 aaKnown RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 MTFR1LQ9H019 292 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 SPATA31A3Q5VYP0 1347 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 A1BGP04217 495 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 SLC15A2Q16348 729 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 SPTY2D1Q68D10 685 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-202ENST00000379446 RUFY2Q8WXA3 655 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.82□□□□□ -1.162e-11■■□□□ 11.8
NEDD9-202ENST00000379446 SPC25Q9HBM1 224 aa7.82□□□□□ -1.16
NEDD9-202ENST00000379446 ABCA8O94911 1581 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 SAMD9LQ8IVG5 1584 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 KDM5DQ9BY66 1539 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 SEC24BO95487 1268 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 MSNP26038 577 aaKnown RBP7.81□□□□□ -1.16
NEDD9-202ENST00000379446 RARSP54136 660 aaKnown RBP7.81□□□□□ -1.16
NEDD9-202ENST00000379446 CCDC129Q6ZRS4 1044 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 PRDM10Q9NQV6 1147 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 SRGAP3O43295 1099 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 MAPK8IP2Q13387 824 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-202ENST00000379446 BRDTQ58F21 947 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-202ENST00000379446 PAGR1Q9BTK6 254 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 FHDC1Q9C0D6 1143 aaPredicted RBP7.81□□□□□ -1.16
NEDD9-202ENST00000379446 ADGRL3Q9HAR2 1447 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 PLCB2Q00722 1185 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 TNFAIP1Q13829 316 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 CDC42BPAQ5VT25 1732 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 AKAP2Q9Y2D5 859 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 SH3TC1Q8TE82 1336 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 NPATQ14207 1427 aa7.81□□□□□ -1.16
NEDD9-202ENST00000379446 USP48Q86UV5 1035 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ZMYM4Q5VZL5 1548 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ASXL1Q8IXJ9 1541 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 CSPG5O95196 566 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 SF3A1Q15459 793 aaKnown RBP7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ZYXQ15942 572 aaKnown RBP7.8□□□□□ -1.16
NEDD9-202ENST00000379446 FAM47CQ5HY64 1035 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 AEBP1Q8IUX7 1158 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 DPF3Q92784 378 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 LNPKQ9C0E8 428 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 DUOX2Q9NRD8 1548 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 RLBP1P12271 317 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ATP2B1P20020 1258 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 GADL1Q6ZQY3 521 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 KIAA0825Q8IV33 1275 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 EYA1Q99502 592 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ATP7AQ04656 1500 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ZSCAN25Q6NSZ9 544 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 FAM184AQ8NB25 1140 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 SLC16A10Q8TF71 515 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 NUP133Q8WUM0 1156 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 NBPF3Q9H094 633 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 ASAP1Q9ULH1 1129 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 PCDHB15Q9Y5E8 787 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 NLRP1Q9C000 1473 aa7.8□□□□□ -1.16
NEDD9-202ENST00000379446 GLRX3O76003 335 aaKnown RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 ZKSCAN1P17029 563 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 MAP3K12Q12852 859 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 PARP10Q53GL7 1025 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 C9orf131Q5VYM1 1079 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 CIAPIN1Q6FI81 312 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 TNS4Q8IZW8 715 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 DDX11Q96FC9 970 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 PLEKHG1Q9ULL1 1385 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 PTMAP06454 111 aaKnown RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 SRP68Q9UHB9 627 aaKnown RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 WDR17Q8IZU2 1322 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 FLT4P35916 1363 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 STK25O00506 426 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 VEGFAP15692 232 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 MCTP1Q6DN14 999 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 ZBTB33Q86T24 672 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 YTHDC2Q9H6S0 1430 aaKnown RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 PES1O00541 588 aaKnown RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 ZNF157P51786 506 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-202ENST00000379446 TCP10Q12799 353 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 FAM89AQ96GI7 184 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 DRC1Q96MC2 740 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 SNRKQ9NRH2 765 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 ZHX1Q9UKY1 873 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms