RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 COL11A2P13942 1736 aaPredicted RBP32.32■■■□□ 2.76
TNFRSF4-201ENST00000379236 TTLL6Q8N841 843 aa32.32■■■□□ 2.76
TNFRSF4-201ENST00000379236 BRIP1Q9BX63 1249 aa32.32■■■□□ 2.76
TNFRSF4-201ENST00000379236 BABAM1Q9NWV8 329 aa32.32■■■□□ 2.76
TNFRSF4-201ENST00000379236 C1QTNF8P60827 252 aa32.31■■■□□ 2.76
TNFRSF4-201ENST00000379236 NBPF5PQ86XG9 351 aaPredicted RBP32.31■■■□□ 2.76
TNFRSF4-201ENST00000379236 CCDC24Q8N4L8 307 aa32.31■■■□□ 2.76
TNFRSF4-201ENST00000379236 SBF1O95248 1867 aa32.31■■■□□ 2.76
TNFRSF4-201ENST00000379236 KIF6Q6ZMV9 814 aa32.3■■■□□ 2.76
TNFRSF4-201ENST00000379236 MYL6BP14649 208 aa32.29■■■□□ 2.76
TNFRSF4-201ENST00000379236 ZNF622Q969S3 477 aaKnown RBP eCLIP32.29■■■□□ 2.76
TNFRSF4-201ENST00000379236 NIP7Q9Y221 180 aaKnown RBP eCLIP32.29■■■□□ 2.76
TNFRSF4-201ENST00000379236 RGL2O15211 777 aa32.28■■■□□ 2.76
TNFRSF4-201ENST00000379236 LAS1LQ9Y4W2 734 aaKnown RBP32.27■■■□□ 2.76
TNFRSF4-201ENST00000379236 C9orf131Q5VYM1 1079 aa32.26■■■□□ 2.75
TNFRSF4-201ENST00000379236 CCDC88AQ3V6T2 1871 aa32.26■■■□□ 2.75
TNFRSF4-201ENST00000379236 ERBB4Q15303 1308 aa32.26■■■□□ 2.75
TNFRSF4-201ENST00000379236 EIF2S2P20042 333 aaKnown RBP32.24■■■□□ 2.75
TNFRSF4-201ENST00000379236 ARFGEF2Q9Y6D5 1785 aa32.23■■■□□ 2.75
TNFRSF4-201ENST00000379236 FAM177BA6PVY3 158 aa32.23■■■□□ 2.75
TNFRSF4-201ENST00000379236 TPTE2Q6XPS3 522 aa32.23■■■□□ 2.75
TNFRSF4-201ENST00000379236 RNF181Q9P0P0 153 aa32.23■■■□□ 2.75
TNFRSF4-201ENST00000379236 GTF2E1P29083 439 aaPredicted RBP32.22■■■□□ 2.75
TNFRSF4-201ENST00000379236 HLFQ16534 295 aa32.22■■■□□ 2.75
TNFRSF4-201ENST00000379236 TRIM35Q9UPQ4 493 aa32.22■■■□□ 2.75
TNFRSF4-201ENST00000379236 MAP3K15Q6ZN16 1313 aa32.22■■■□□ 2.75
TNFRSF4-201ENST00000379236 ZNF316A6NFI3 1004 aaPredicted RBP32.21■■■□□ 2.75
TNFRSF4-201ENST00000379236 ERVV-1B6SEH8 477 aa32.21■■■□□ 2.75
TNFRSF4-201ENST00000379236 TTLL7Q6ZT98 887 aa32.19■■■□□ 2.74
TNFRSF4-201ENST00000379236 SENP3-EIF4A1A0A087X0R7 540 aa32.18■■■□□ 2.74
TNFRSF4-201ENST00000379236 RASSF7Q02833 373 aa32.18■■■□□ 2.74
TNFRSF4-201ENST00000379236 CNKSR1Q969H4 720 aa32.18■■■□□ 2.74
TNFRSF4-201ENST00000379236 ZBTB3Q9H5J0 574 aa32.18■■■□□ 2.74
TNFRSF4-201ENST00000379236 STYK1Q6J9G0 422 aa32.17■■■□□ 2.74
TNFRSF4-201ENST00000379236 MASTLQ96GX5 879 aa32.17■■■□□ 2.74
TNFRSF4-201ENST00000379236 NYXQ9GZU5 481 aa32.17■■■□□ 2.74
TNFRSF4-201ENST00000379236 ZNF219Q9P2Y4 722 aaPredicted RBP32.17■■■□□ 2.74
TNFRSF4-201ENST00000379236 SLX4Q8IY92 1834 aa32.16■■■□□ 2.74
TNFRSF4-201ENST00000379236 CHL1O00533 1208 aa32.16■■■□□ 2.74
TNFRSF4-201ENST00000379236 TIAM2Q8IVF5 1701 aa32.16■■■□□ 2.74
TNFRSF4-201ENST00000379236 FER1L6Q2WGJ9 1857 aa32.15■■■□□ 2.74
TNFRSF4-201ENST00000379236 SRGNP10124 158 aa32.15■■■□□ 2.74
TNFRSF4-201ENST00000379236 NECTIN2Q92692 538 aa32.15■■■□□ 2.74
TNFRSF4-201ENST00000379236 C21orf2O43822 256 aa32.14■■■□□ 2.74
TNFRSF4-201ENST00000379236 ANKRD36CQ5JPF3 1778 aa32.14■■■□□ 2.74
TNFRSF4-201ENST00000379236 APAF1O14727 1248 aa32.13■■■□□ 2.73
TNFRSF4-201ENST00000379236 LMNB1P20700 586 aa32.13■■■□□ 2.73
TNFRSF4-201ENST00000379236 KDM2BQ8NHM5 1336 aa32.12■■■□□ 2.73
TNFRSF4-201ENST00000379236 GPTP24298 496 aa32.12■■■□□ 2.73
TNFRSF4-201ENST00000379236 CALD1Q05682 793 aaKnown RBP32.12■■■□□ 2.73
TNFRSF4-201ENST00000379236 DICER1Q9UPY3 1922 aaKnown RBP32.11■■■□□ 2.73
TNFRSF4-201ENST00000379236 ANP32CO43423 234 aa32.11■■■□□ 2.73
TNFRSF4-201ENST00000379236 NPR1P16066 1061 aa32.11■■■□□ 2.73
TNFRSF4-201ENST00000379236 PRPF40BQ6NWY9 871 aaKnown RBP32.11■■■□□ 2.73
TNFRSF4-201ENST00000379236 CFAP44Q96MT7 982 aa32.11■■■□□ 2.73
TNFRSF4-201ENST00000379236 TNRC6CQ9HCJ0 1690 aaKnown RBP32.11■■■□□ 2.73
TNFRSF4-201ENST00000379236 SOGA3Q5TF21 947 aa32.1■■■□□ 2.73
TNFRSF4-201ENST00000379236 GIGYF2Q6Y7W6 1299 aaKnown RBP32.1■■■□□ 2.73
TNFRSF4-201ENST00000379236 ANXA1P04083 346 aa32.09■■■□□ 2.73
TNFRSF4-201ENST00000379236 PDIA6Q15084 440 aa32.09■■■□□ 2.73
TNFRSF4-201ENST00000379236 ZC3H4Q9UPT8 1303 aaKnown RBP32.08■■■□□ 2.73
TNFRSF4-201ENST00000379236 KRT24Q2M2I5 525 aa32.08■■■□□ 2.73
TNFRSF4-201ENST00000379236 KIF3CO14782 793 aa32.07■■■□□ 2.72
TNFRSF4-201ENST00000379236 AIMP1Q12904 312 aaKnown RBP32.07■■■□□ 2.72
TNFRSF4-201ENST00000379236 PROSER3Q2NL68 480 aa32.07■■■□□ 2.72
TNFRSF4-201ENST00000379236 HDGFL1Q5TGJ6 251 aa32.07■■■□□ 2.72
TNFRSF4-201ENST00000379236 NUTM1Q86Y26 1132 aa32.07■■■□□ 2.72
TNFRSF4-201ENST00000379236 IBTKQ9P2D0 1353 aaPredicted RBP32.07■■■□□ 2.72
TNFRSF4-201ENST00000379236 NFKBIEO00221 500 aa32.06■■■□□ 2.72
TNFRSF4-201ENST00000379236 PPP1R42Q7Z4L9 355 aa32.06■■■□□ 2.72
TNFRSF4-201ENST00000379236 DDX21Q9NR30 783 aaKnown RBP eCLIP32.06■■■□□ 2.72
TNFRSF4-201ENST00000379236 HOXB7P09629 217 aa32.05■■■□□ 2.72
TNFRSF4-201ENST00000379236 GNAI1P63096 354 aa32.05■■■□□ 2.72
TNFRSF4-201ENST00000379236 PARP10Q53GL7 1025 aa32.05■■■□□ 2.72
TNFRSF4-201ENST00000379236 C16orf71Q8IYS4 520 aaPredicted RBP32.05■■■□□ 2.72
TNFRSF4-201ENST00000379236 NMRK2Q9NPI5 230 aa32.05■■■□□ 2.72
TNFRSF4-201ENST00000379236 UBN2Q6ZU65 1347 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 ERFEQ4G0M1 354 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 COPS6Q7L5N1 327 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 LRP10Q7Z4F1 713 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 ZNF34Q8IZ26 560 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 XAGE3Q8WTP9 111 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 TAOK3Q9H2K8 898 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 MBIPQ9NS73 344 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 IFT57Q9NWB7 429 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 ABCC12Q96J65 1359 aa32.04■■■□□ 2.72
TNFRSF4-201ENST00000379236 KLRG2A4D1S0 409 aaPredicted RBP32.03■■■□□ 2.72
TNFRSF4-201ENST00000379236 ALDH1B1P30837 517 aa32.03■■■□□ 2.72
TNFRSF4-201ENST00000379236 HSP90AB3PQ58FF7 597 aa32.03■■■□□ 2.72
TNFRSF4-201ENST00000379236 SUSD4Q5VX71 490 aa32.03■■■□□ 2.72
TNFRSF4-201ENST00000379236 MRS2Q9HD23 443 aa32.03■■■□□ 2.72
TNFRSF4-201ENST00000379236 CCDC184Q52MB2 194 aa32.02■■■□□ 2.72
TNFRSF4-201ENST00000379236 CHPF2Q9P2E5 772 aa32.02■■■□□ 2.72
TNFRSF4-201ENST00000379236 CCDC93Q567U6 631 aa32.01■■■□□ 2.71
TNFRSF4-201ENST00000379236 RPGRQ92834 1020 aaKnown RBP32.01■■■□□ 2.71
TNFRSF4-201ENST00000379236 DUSP27Q5VZP5 1158 aa32■■■□□ 2.71
TNFRSF4-201ENST00000379236 DBF4Q9UBU7 674 aaPredicted RBP32■■■□□ 2.71
TNFRSF4-201ENST00000379236 LTBP3Q9NS15 1303 aa32■■■□□ 2.71
TNFRSF4-201ENST00000379236 TOMM70O94826 608 aa31.99■■■□□ 2.71
TNFRSF4-201ENST00000379236 RIC1Q4ADV7 1423 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms