RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 ZNF652Q9Y2D9 606 aa18.12■□□□□ 0.49
PRPF18-202ENST00000378572 ZC3H4Q9UPT8 1303 aaKnown RBP18.12■□□□□ 0.49
PRPF18-202ENST00000378572 C21orf2O43822 256 aa18.11■□□□□ 0.49
PRPF18-202ENST00000378572 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
PRPF18-202ENST00000378572 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
PRPF18-202ENST00000378572 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
PRPF18-202ENST00000378572 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
PRPF18-202ENST00000378572 NFKBIEO00221 500 aa18.09■□□□□ 0.49
PRPF18-202ENST00000378572 FSTL1Q12841 308 aa18.09■□□□□ 0.49
PRPF18-202ENST00000378572 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
PRPF18-202ENST00000378572 CCDC88AQ3V6T2 1871 aa18.08■□□□□ 0.49
PRPF18-202ENST00000378572 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
PRPF18-202ENST00000378572 HTATSF1O43719 755 aaKnown RBP18.08■□□□□ 0.48
PRPF18-202ENST00000378572 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
PRPF18-202ENST00000378572 PRELPP51888 382 aa18.07■□□□□ 0.48
PRPF18-202ENST00000378572 SMC1BQ8NDV3 1235 aa18.07■□□□□ 0.48
PRPF18-202ENST00000378572 CNKSR1Q969H4 720 aa18.07■□□□□ 0.48
PRPF18-202ENST00000378572 MIS18AQ9NYP9 233 aa18.07■□□□□ 0.48
PRPF18-202ENST00000378572 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
PRPF18-202ENST00000378572 HTRA3P83110 453 aa18.06■□□□□ 0.48
PRPF18-202ENST00000378572 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
PRPF18-202ENST00000378572 ERFEQ4G0M1 354 aa18.06■□□□□ 0.48
PRPF18-202ENST00000378572 PRPF40BQ6NWY9 871 aaKnown RBP18.06■□□□□ 0.48
PRPF18-202ENST00000378572 TAOK3Q9H2K8 898 aa18.06■□□□□ 0.48
PRPF18-202ENST00000378572 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
PRPF18-202ENST00000378572 LAMB4A4D0S4 1761 aa18.05■□□□□ 0.48
PRPF18-202ENST00000378572 VEGFAP15692 232 aaPredicted RBP18.05■□□□□ 0.48
PRPF18-202ENST00000378572 STYK1Q6J9G0 422 aa18.05■□□□□ 0.48
PRPF18-202ENST00000378572 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
PRPF18-202ENST00000378572 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
PRPF18-202ENST00000378572 MASTLQ96GX5 879 aa18.05■□□□□ 0.48
PRPF18-202ENST00000378572 GTF2E1P29083 439 aaPredicted RBP18.04■□□□□ 0.48
PRPF18-202ENST00000378572 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
PRPF18-202ENST00000378572 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
PRPF18-202ENST00000378572 SOGA3Q5TF21 947 aa18.03■□□□□ 0.48
PRPF18-202ENST00000378572 IFFO2Q5TF58 517 aa18.03■□□□□ 0.48
PRPF18-202ENST00000378572 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
PRPF18-202ENST00000378572 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
PRPF18-202ENST00000378572 SRGNP10124 158 aa18.03■□□□□ 0.48
PRPF18-202ENST00000378572 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
PRPF18-202ENST00000378572 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
PRPF18-202ENST00000378572 SLX4Q8IY92 1834 aa18.02■□□□□ 0.48
PRPF18-202ENST00000378572 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
PRPF18-202ENST00000378572 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
PRPF18-202ENST00000378572 FER1L6Q2WGJ9 1857 aa18.02■□□□□ 0.48
PRPF18-202ENST00000378572 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
PRPF18-202ENST00000378572 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
PRPF18-202ENST00000378572 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
PRPF18-202ENST00000378572 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
PRPF18-202ENST00000378572 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
PRPF18-202ENST00000378572 KDM3BQ7LBC6 1761 aa18■□□□□ 0.47
PRPF18-202ENST00000378572 NPR1P16066 1061 aa18■□□□□ 0.47
PRPF18-202ENST00000378572 CCDC93Q567U6 631 aa18■□□□□ 0.47
PRPF18-202ENST00000378572 DNAJC5GQ8N7S2 189 aa18■□□□□ 0.47
PRPF18-202ENST00000378572 MYL6BP14649 208 aa17.99■□□□□ 0.47
PRPF18-202ENST00000378572 HLFQ16534 295 aa17.99■□□□□ 0.47
PRPF18-202ENST00000378572 KLRG1Q96E93 195 aa17.99■□□□□ 0.47
PRPF18-202ENST00000378572 LTBP3Q9NS15 1303 aa17.99■□□□□ 0.47
PRPF18-202ENST00000378572 DICER1Q9UPY3 1922 aaKnown RBP17.99■□□□□ 0.47
PRPF18-202ENST00000378572 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
PRPF18-202ENST00000378572 RGL2O15211 777 aa17.96■□□□□ 0.47
PRPF18-202ENST00000378572 EIF4A1P60842 406 aaKnown RBP17.96■□□□□ 0.47
PRPF18-202ENST00000378572 NYXQ9GZU5 481 aa17.96■□□□□ 0.47
PRPF18-202ENST00000378572 ZBTB3Q9H5J0 574 aa17.96■□□□□ 0.47
PRPF18-202ENST00000378572 TSPYL4Q9UJ04 414 aa17.96■□□□□ 0.47
PRPF18-202ENST00000378572 DDNO94850 711 aaPredicted RBP17.95■□□□□ 0.46
PRPF18-202ENST00000378572 GPTP24298 496 aa17.95■□□□□ 0.46
PRPF18-202ENST00000378572 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
PRPF18-202ENST00000378572 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
PRPF18-202ENST00000378572 MAP3K15Q6ZN16 1313 aa17.95■□□□□ 0.46
PRPF18-202ENST00000378572 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
PRPF18-202ENST00000378572 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRPF18-202ENST00000378572 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
PRPF18-202ENST00000378572 TTLL7Q6ZT98 887 aa17.94■□□□□ 0.46
PRPF18-202ENST00000378572 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
PRPF18-202ENST00000378572 ABCC12Q96J65 1359 aa17.94■□□□□ 0.46
PRPF18-202ENST00000378572 ALDH1B1P30837 517 aa17.93■□□□□ 0.46
PRPF18-202ENST00000378572 POTECB2RU33 542 aa17.92■□□□□ 0.46
PRPF18-202ENST00000378572 ERVV-1B6SEH8 477 aa17.92■□□□□ 0.46
PRPF18-202ENST00000378572 RIPK4P57078 832 aa17.92■□□□□ 0.46
PRPF18-202ENST00000378572 RTKN2Q8IZC4 609 aa17.92■□□□□ 0.46
PRPF18-202ENST00000378572 NUP98P52948 1817 aa17.92■□□□□ 0.46
PRPF18-202ENST00000378572 IQCA1LA6NCM1 817 aa17.92■□□□□ 0.46
PRPF18-202ENST00000378572 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
PRPF18-202ENST00000378572 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
PRPF18-202ENST00000378572 CHADLQ6NUI6 762 aa17.91■□□□□ 0.46
PRPF18-202ENST00000378572 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
PRPF18-202ENST00000378572 YTHDC1Q96MU7 727 aaKnown RBP17.91■□□□□ 0.46
PRPF18-202ENST00000378572 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
PRPF18-202ENST00000378572 WDR43Q15061 677 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRPF18-202ENST00000378572 ERBB4Q15303 1308 aa17.89■□□□□ 0.46
PRPF18-202ENST00000378572 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.46
PRPF18-202ENST00000378572 NEUROD2Q15784 382 aa17.89■□□□□ 0.46
PRPF18-202ENST00000378572 EAPPQ56P03 285 aaPredicted RBP17.89■□□□□ 0.46
PRPF18-202ENST00000378572 JMYQ8N9B5 988 aa17.89■□□□□ 0.46
PRPF18-202ENST00000378572 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
PRPF18-202ENST00000378572 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.45
PRPF18-202ENST00000378572 POTEIP0CG38 1075 aa17.89■□□□□ 0.45
PRPF18-202ENST00000378572 POTEJP0CG39 1038 aa17.89■□□□□ 0.45
PRPF18-202ENST00000378572 IARSP41252 1262 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms