RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 NIP7Q9Y221 180 aaKnown RBP eCLIP29.39■■■□□ 2.3
CCDC107-203ENST00000378407 ANKRD31Q8N7Z5 1873 aa29.39■■■□□ 2.3
CCDC107-203ENST00000378407 EIF4A1P60842 406 aaKnown RBP29.38■■■□□ 2.29
CCDC107-203ENST00000378407 WDR43Q15061 677 aaKnown RBP eCLIP29.38■■■□□ 2.29
CCDC107-203ENST00000378407 C16orf71Q8IYS4 520 aaPredicted RBP29.38■■■□□ 2.29
CCDC107-203ENST00000378407 TSPYL4Q9UJ04 414 aa29.38■■■□□ 2.29
CCDC107-203ENST00000378407 COL11A2P13942 1736 aaPredicted RBP29.37■■■□□ 2.29
CCDC107-203ENST00000378407 LMNB1P20700 586 aa29.37■■■□□ 2.29
CCDC107-203ENST00000378407 KIF6Q6ZMV9 814 aa29.36■■■□□ 2.29
CCDC107-203ENST00000378407 RRP7AQ9Y3A4 280 aaKnown RBP29.36■■■□□ 2.29
CCDC107-203ENST00000378407 FAM177BA6PVY3 158 aa29.35■■■□□ 2.29
CCDC107-203ENST00000378407 HSPA6P17066 643 aa29.35■■■□□ 2.29
CCDC107-203ENST00000378407 RGL2O15211 777 aa29.34■■■□□ 2.29
CCDC107-203ENST00000378407 C21orf2O43822 256 aa29.34■■■□□ 2.29
CCDC107-203ENST00000378407 CCDC146Q8IYE0 955 aa29.34■■■□□ 2.29
CCDC107-203ENST00000378407 CNKSR1Q969H4 720 aa29.34■■■□□ 2.29
CCDC107-203ENST00000378407 TOMM70O94826 608 aa29.33■■■□□ 2.29
CCDC107-203ENST00000378407 MYL6BP14649 208 aa29.33■■■□□ 2.29
CCDC107-203ENST00000378407 GTF2E1P29083 439 aaPredicted RBP29.33■■■□□ 2.29
CCDC107-203ENST00000378407 STYK1Q6J9G0 422 aa29.33■■■□□ 2.29
CCDC107-203ENST00000378407 TPTE2Q6XPS3 522 aa29.33■■■□□ 2.29
CCDC107-203ENST00000378407 ZC3H4Q9UPT8 1303 aaKnown RBP29.33■■■□□ 2.29
CCDC107-203ENST00000378407 TMPOP42166 694 aaKnown RBP29.32■■■□□ 2.28
CCDC107-203ENST00000378407 MASTLQ96GX5 879 aa29.32■■■□□ 2.28
CCDC107-203ENST00000378407 NEUROD2Q15784 382 aa29.31■■■□□ 2.28
CCDC107-203ENST00000378407 NFKBIEO00221 500 aa29.3■■■□□ 2.28
CCDC107-203ENST00000378407 SRGNP10124 158 aa29.3■■■□□ 2.28
CCDC107-203ENST00000378407 HLFQ16534 295 aa29.3■■■□□ 2.28
CCDC107-203ENST00000378407 PRPF40BQ6NWY9 871 aaKnown RBP29.3■■■□□ 2.28
CCDC107-203ENST00000378407 SBF1O95248 1867 aa29.29■■■□□ 2.28
CCDC107-203ENST00000378407 MAP3K15Q6ZN16 1313 aa29.28■■■□□ 2.28
CCDC107-203ENST00000378407 SOGA3Q5TF21 947 aa29.28■■■□□ 2.28
CCDC107-203ENST00000378407 TIAM2Q8IVF5 1701 aa29.28■■■□□ 2.28
CCDC107-203ENST00000378407 ZBTB3Q9H5J0 574 aa29.27■■■□□ 2.28
CCDC107-203ENST00000378407 TNRC6CQ9HCJ0 1690 aaKnown RBP29.27■■■□□ 2.28
CCDC107-203ENST00000378407 CEP350Q5VT06 3117 aa29.27■■■□□ 2.28
CCDC107-203ENST00000378407 ERBB4Q15303 1308 aa29.26■■■□□ 2.27
CCDC107-203ENST00000378407 ERVV-1B6SEH8 477 aa29.26■■■□□ 2.27
CCDC107-203ENST00000378407 RUNDC1Q96C34 613 aa29.26■■■□□ 2.27
CCDC107-203ENST00000378407 NYXQ9GZU5 481 aa29.26■■■□□ 2.27
CCDC107-203ENST00000378407 TAOK3Q9H2K8 898 aa29.26■■■□□ 2.27
CCDC107-203ENST00000378407 RRAGCQ9HB90 399 aa29.26■■■□□ 2.27
CCDC107-203ENST00000378407 NPR1P16066 1061 aa29.25■■■□□ 2.27
CCDC107-203ENST00000378407 EIF2S2P20042 333 aaKnown RBP29.25■■■□□ 2.27
CCDC107-203ENST00000378407 PRELPP51888 382 aa29.25■■■□□ 2.27
CCDC107-203ENST00000378407 TTLL7Q6ZT98 887 aa29.25■■■□□ 2.27
CCDC107-203ENST00000378407 BABAM1Q9NWV8 329 aa29.25■■■□□ 2.27
CCDC107-203ENST00000378407 CACNA1SQ13698 1873 aa29.25■■■□□ 2.27
CCDC107-203ENST00000378407 RBM46Q8TBY0 533 aaKnown RBP29.24■■■□□ 2.27
CCDC107-203ENST00000378407 LAS1LQ9Y4W2 734 aaKnown RBP29.24■■■□□ 2.27
CCDC107-203ENST00000378407 ERFEQ4G0M1 354 aa29.23■■■□□ 2.27
CCDC107-203ENST00000378407 GPTP24298 496 aa29.22■■■□□ 2.27
CCDC107-203ENST00000378407 PRKRIP1Q9H875 184 aaPredicted RBP29.22■■■□□ 2.27
CCDC107-203ENST00000378407 GLTPD2A6NH11 291 aa29.21■■■□□ 2.27
CCDC107-203ENST00000378407 ARFGEF2Q9Y6D5 1785 aa29.21■■■□□ 2.27
CCDC107-203ENST00000378407 APLP1P51693 650 aa29.2■■■□□ 2.26
CCDC107-203ENST00000378407 CCDC93Q567U6 631 aa29.2■■■□□ 2.26
CCDC107-203ENST00000378407 NUTM1Q86Y26 1132 aa29.2■■■□□ 2.26
CCDC107-203ENST00000378407 ADAMTS8Q9UP79 889 aa29.2■■■□□ 2.26
CCDC107-203ENST00000378407 SLX4Q8IY92 1834 aa29.2■■■□□ 2.26
CCDC107-203ENST00000378407 LTBP3Q9NS15 1303 aa29.2■■■□□ 2.26
CCDC107-203ENST00000378407 DPY19L2Q6NUT2 758 aa29.19■■■□□ 2.26
CCDC107-203ENST00000378407 NECTIN2Q92692 538 aa29.19■■■□□ 2.26
CCDC107-203ENST00000378407 ABCC12Q96J65 1359 aa29.18■■■□□ 2.26
CCDC107-203ENST00000378407 FER1L6Q2WGJ9 1857 aa29.17■■■□□ 2.26
CCDC107-203ENST00000378407 FSTL1Q12841 308 aa29.17■■■□□ 2.26
CCDC107-203ENST00000378407 KLRG2A4D1S0 409 aaPredicted RBP29.16■■■□□ 2.26
CCDC107-203ENST00000378407 VEGFAP15692 232 aaPredicted RBP29.16■■■□□ 2.26
CCDC107-203ENST00000378407 ALDH1B1P30837 517 aa29.16■■■□□ 2.26
CCDC107-203ENST00000378407 CCDC88AQ3V6T2 1871 aa29.16■■■□□ 2.26
CCDC107-203ENST00000378407 NUP98P52948 1817 aa29.15■■■□□ 2.26
CCDC107-203ENST00000378407 IBTKQ9P2D0 1353 aaPredicted RBP29.15■■■□□ 2.26
CCDC107-203ENST00000378407 ANXA1P04083 346 aa29.15■■■□□ 2.26
CCDC107-203ENST00000378407 GIGYF2Q6Y7W6 1299 aaKnown RBP29.15■■■□□ 2.26
CCDC107-203ENST00000378407 RPGRQ92834 1020 aaKnown RBP29.15■■■□□ 2.26
CCDC107-203ENST00000378407 UBN2Q6ZU65 1347 aa29.15■■■□□ 2.26
CCDC107-203ENST00000378407 SMC1BQ8NDV3 1235 aa29.14■■■□□ 2.26
CCDC107-203ENST00000378407 TRIM35Q9UPQ4 493 aa29.14■■■□□ 2.26
CCDC107-203ENST00000378407 PROSER3Q2NL68 480 aa29.13■■■□□ 2.25
CCDC107-203ENST00000378407 SUSD4Q5VX71 490 aa29.13■■■□□ 2.25
CCDC107-203ENST00000378407 PPP1R42Q7Z4L9 355 aa29.13■■■□□ 2.25
CCDC107-203ENST00000378407 AIMP1Q12904 312 aaKnown RBP29.12■■■□□ 2.25
CCDC107-203ENST00000378407 PARP10Q53GL7 1025 aa29.12■■■□□ 2.25
CCDC107-203ENST00000378407 CHL1O00533 1208 aa29.11■■■□□ 2.25
CCDC107-203ENST00000378407 FKBP4Q02790 459 aaKnown RBP eCLIP29.11■■■□□ 2.25
CCDC107-203ENST00000378407 PDIA6Q15084 440 aa29.11■■■□□ 2.25
CCDC107-203ENST00000378407 ZNF34Q8IZ26 560 aa29.11■■■□□ 2.25
CCDC107-203ENST00000378407 RTKN2Q8IZC4 609 aa29.11■■■□□ 2.25
CCDC107-203ENST00000378407 KRT24Q2M2I5 525 aa29.1■■■□□ 2.25
CCDC107-203ENST00000378407 C7orf43Q8WVR3 580 aa29.1■■■□□ 2.25
CCDC107-203ENST00000378407 CRY2Q49AN0 593 aa29.09■■■□□ 2.25
CCDC107-203ENST00000378407 OLFM4Q6UX06 510 aa29.09■■■□□ 2.25
CCDC107-203ENST00000378407 XAGE3Q8WTP9 111 aa29.09■■■□□ 2.25
CCDC107-203ENST00000378407 RIC1Q4ADV7 1423 aa29.09■■■□□ 2.25
CCDC107-203ENST00000378407 NTSR2O95665 410 aa29.08■■■□□ 2.25
CCDC107-203ENST00000378407 HSP90AB3PQ58FF7 597 aa29.08■■■□□ 2.25
CCDC107-203ENST00000378407 HDGFL1Q5TGJ6 251 aa29.08■■■□□ 2.25
CCDC107-203ENST00000378407 COPS6Q7L5N1 327 aa29.08■■■□□ 2.25
CCDC107-203ENST00000378407 LRP10Q7Z4F1 713 aa29.08■■■□□ 2.25
CCDC107-203ENST00000378407 ZNF277Q9NRM2 450 aaPredicted RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms