RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 DAPK1P53355 1430 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 PSMC4P43686 418 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 LACTBP83111 547 aaPredicted RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 EBAG9O00559 213 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 ZNF710Q8N1W2 664 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 SARNPP82979 210 aaKnown RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 MVPQ14764 893 aaKnown RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 CFAP58Q5T655 872 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 CTCFLQ8NI51 663 aaPredicted RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 CTAGE9A4FU28 777 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 TNNT1P13805 278 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 MCM4P33991 863 aa16.72■□□□□ 0.27
PCDH17-201ENST00000377918 TDRD12Q587J7 1177 aaKnown RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 IPO4Q8TEX9 1081 aaKnown RBP16.72■□□□□ 0.27
PCDH17-201ENST00000377918 ARHGAP24Q8N264 748 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDH17-201ENST00000377918 TCHPQ9BT92 498 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 CCDC121Q6ZUS5 278 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 PHLDB2Q86SQ0 1253 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 OTUD6BQ8N6M0 293 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 EIF3DO15371 548 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDH17-201ENST00000377918 NOP2P46087 812 aaKnown RBP16.71■□□□□ 0.27
PCDH17-201ENST00000377918 STMN2Q93045 179 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 SETDB1Q15047 1291 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 CSRNP2Q9H175 543 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 GBP1P32455 592 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
PCDH17-201ENST00000377918 USP5P45974 858 aa16.71■□□□□ 0.27
PCDH17-201ENST00000377918 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.26
PCDH17-201ENST00000377918 SPG7Q9UQ90 795 aa16.71■□□□□ 0.26
PCDH17-201ENST00000377918 TRPC3Q13507 836 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 CFAP157Q5JU67 520 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 RBM5P52756 815 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 SCLT1Q96NL6 688 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 ZNF692Q9BU19 519 aaPredicted RBP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 MACROD2A1Z1Q3 448 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 MGEA5O60502 916 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 APBB1IPQ7Z5R6 666 aaPredicted RBP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 GBP7Q8N8V2 638 aaPredicted RBP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
PCDH17-201ENST00000377918 CASQ2O14958 399 aaPredicted RBP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 GLRX3O76003 335 aaKnown RBP16.7■□□□□ 0.26
PCDH17-201ENST00000377918 CLGNO14967 610 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 TATP17735 454 aaPredicted RBP16.69■□□□□ 0.26
PCDH17-201ENST00000377918 CACYBPQ9HB71 228 aaKnown RBP16.69■□□□□ 0.26
PCDH17-201ENST00000377918 B4DLN1 442 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
PCDH17-201ENST00000377918 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
PCDH17-201ENST00000377918 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 TAOK1Q7L7X3 1001 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 TTC31Q49AM3 519 aaPredicted RBP16.69■□□□□ 0.26
PCDH17-201ENST00000377918 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 SATB1Q01826 763 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 HVCN1Q96D96 273 aa16.69■□□□□ 0.26
PCDH17-201ENST00000377918 PRC1O43663 620 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 CIB2O75838 187 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDH17-201ENST00000377918 NCBP1Q09161 790 aaKnown RBP16.68■□□□□ 0.26
PCDH17-201ENST00000377918 MTIF2P46199 727 aaKnown RBP16.68■□□□□ 0.26
PCDH17-201ENST00000377918 NUF2Q9BZD4 464 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 SYNCQ9H7C4 482 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 ZNF853P0CG23 659 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
PCDH17-201ENST00000377918 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDH17-201ENST00000377918 ERMNQ8TAM6 284 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 TUBB2AQ13885 445 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 TUBB2BQ9BVA1 445 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 LMNTD2Q8IXW0 634 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 RABGAP1Q9Y3P9 1069 aa16.68■□□□□ 0.26
PCDH17-201ENST00000377918 WDR78Q5VTH9 848 aa16.67■□□□□ 0.26
PCDH17-201ENST00000377918 RNF168Q8IYW5 571 aaPredicted RBP16.67■□□□□ 0.26
PCDH17-201ENST00000377918 PUS7Q96PZ0 661 aaKnown RBP16.67■□□□□ 0.26
PCDH17-201ENST00000377918 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
PCDH17-201ENST00000377918 SPAG1Q07617 926 aa16.67■□□□□ 0.26
PCDH17-201ENST00000377918 MKNK2Q9HBH9 465 aa16.67■□□□□ 0.26
PCDH17-201ENST00000377918 FKBP4Q02790 459 aaKnown RBP eCLIP16.67■□□□□ 0.26
PCDH17-201ENST00000377918 SSRP1Q08945 709 aaKnown RBP16.66■□□□□ 0.26
PCDH17-201ENST00000377918 HDGFL1Q5TGJ6 251 aa16.66■□□□□ 0.26
PCDH17-201ENST00000377918 GPR161Q8N6U8 529 aaKnown RBP16.66■□□□□ 0.26
PCDH17-201ENST00000377918 MTRF1LQ9UGC7 380 aaKnown RBP16.66■□□□□ 0.26
PCDH17-201ENST00000377918 SRGAP1Q7Z6B7 1085 aa16.66■□□□□ 0.26
PCDH17-201ENST00000377918 STARD3NLO95772 234 aa16.66■□□□□ 0.26
PCDH17-201ENST00000377918 RASSF2P50749 326 aa16.66■□□□□ 0.26
PCDH17-201ENST00000377918 TBC1D31Q96DN5 1066 aa16.66■□□□□ 0.26
PCDH17-201ENST00000377918 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
PCDH17-201ENST00000377918 SAMD15Q9P1V8 674 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 423.1 ms