RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
SF1-205ENST00000377394 PI4KAP1Q8N8J0 262 aa16.65■□□□□ 0.26
SF1-205ENST00000377394 LSG1Q9H089 658 aaKnown RBP16.65■□□□□ 0.26
SF1-205ENST00000377394 KIF20AO95235 890 aa16.64■□□□□ 0.25
SF1-205ENST00000377394 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
SF1-205ENST00000377394 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
SF1-205ENST00000377394 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
SF1-205ENST00000377394 ADCY9O60503 1353 aa16.64■□□□□ 0.25
SF1-205ENST00000377394 FER1L4A9Z1Z3 1794 aa16.63■□□□□ 0.25
SF1-205ENST00000377394 NOLC1Q14978 699 aaKnown RBP eCLIP16.63■□□□□ 0.25
SF1-205ENST00000377394 TTC14Q96N46 770 aa16.63■□□□□ 0.25
SF1-205ENST00000377394 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
SF1-205ENST00000377394 ANXA1P04083 346 aa16.63■□□□□ 0.25
SF1-205ENST00000377394 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
SF1-205ENST00000377394 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
SF1-205ENST00000377394 RASEFQ8IZ41 740 aa16.62■□□□□ 0.25
SF1-205ENST00000377394 RPAP1Q9BWH6 1393 aaPredicted RBP16.62■□□□□ 0.25
SF1-205ENST00000377394 WDR33Q9C0J8 1336 aaKnown RBP16.62■□□□□ 0.25
SF1-205ENST00000377394 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
SF1-205ENST00000377394 PRIMPOLQ96LW4 560 aa16.62■□□□□ 0.25
SF1-205ENST00000377394 ZBTB22O15209 634 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 LMO7Q8WWI1 1683 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 BTBD11A6QL63 1104 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
SF1-205ENST00000377394 U2AF2P26368 475 aaKnown RBP eCLIP16.61■□□□□ 0.253e-8■■■■■ 38.7
SF1-205ENST00000377394 MTX1Q13505 466 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
SF1-205ENST00000377394 TMEM51Q9NW97 253 aa16.61■□□□□ 0.25
SF1-205ENST00000377394 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.25
SF1-205ENST00000377394 HMGN5P82970 282 aaKnown RBP16.6■□□□□ 0.25
SF1-205ENST00000377394 PIBF1Q8WXW3 757 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 TTC41PQ6P2S7 1318 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 FOXD4L6Q3SYB3 417 aaPredicted RBP16.6■□□□□ 0.25
SF1-205ENST00000377394 FOXD4L3Q6VB84 417 aaPredicted RBP16.6■□□□□ 0.25
SF1-205ENST00000377394 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 AK2P54819 239 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
SF1-205ENST00000377394 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
SF1-205ENST00000377394 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
SF1-205ENST00000377394 TEFQ10587 303 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 CWC27Q6UX04 472 aaKnown RBP16.59■□□□□ 0.25
SF1-205ENST00000377394 RUFY3Q7L099 469 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 RGPD2P0DJD1 1756 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 VGLL3A8MV65 326 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 GLRX3O76003 335 aaKnown RBP16.59■□□□□ 0.25
SF1-205ENST00000377394 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 USP25Q9UHP3 1055 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 SPG7Q9UQ90 795 aa16.59■□□□□ 0.25
SF1-205ENST00000377394 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.25
SF1-205ENST00000377394 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.25
SF1-205ENST00000377394 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
SF1-205ENST00000377394 PLEKHO1Q53GL0 409 aaPredicted RBP16.58■□□□□ 0.24
SF1-205ENST00000377394 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
SF1-205ENST00000377394 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
SF1-205ENST00000377394 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
SF1-205ENST00000377394 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 TPRNQ4KMQ1 711 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 SYAP1Q96A49 352 aaPredicted RBP16.57■□□□□ 0.24
SF1-205ENST00000377394 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
SF1-205ENST00000377394 NAP1L2Q9ULW6 460 aaPredicted RBP16.57■□□□□ 0.24
SF1-205ENST00000377394 LIMCH1Q9UPQ0 1083 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 MAP3K2Q9Y2U5 619 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 PXDNQ92626 1479 aa16.57■□□□□ 0.24
SF1-205ENST00000377394 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
SF1-205ENST00000377394 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
SF1-205ENST00000377394 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
SF1-205ENST00000377394 GIGYF1O75420 1035 aaPredicted RBP16.56■□□□□ 0.24
SF1-205ENST00000377394 PSME1Q06323 249 aa16.56■□□□□ 0.24
SF1-205ENST00000377394 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
SF1-205ENST00000377394 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
SF1-205ENST00000377394 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
SF1-205ENST00000377394 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
SF1-205ENST00000377394 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
SF1-205ENST00000377394 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
SF1-205ENST00000377394 ZSCAN22P10073 491 aaPredicted RBP16.55■□□□□ 0.24
SF1-205ENST00000377394 PTH1RQ03431 593 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 CPA1P15085 419 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 SYT1P21579 422 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 ESCO1Q5FWF5 840 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 KCNB2Q92953 911 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 DIAPH3Q9NSV4 1193 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 HYPKQ9NX55 129 aa16.55■□□□□ 0.24
SF1-205ENST00000377394 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
SF1-205ENST00000377394 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
SF1-205ENST00000377394 CNPY2Q9Y2B0 182 aa16.54■□□□□ 0.24
SF1-205ENST00000377394 OVOS2A0A0G2JMS6 1433 aa16.54■□□□□ 0.24
SF1-205ENST00000377394 STX6O43752 255 aa16.54■□□□□ 0.24
SF1-205ENST00000377394 LARGE1O95461 756 aa16.54■□□□□ 0.24
SF1-205ENST00000377394 CASTP20810 708 aaKnown RBP16.54■□□□□ 0.24
SF1-205ENST00000377394 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.54■□□□□ 0.24
SF1-205ENST00000377394 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms