RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 NEURL1BA8MQ27 555 aa26.53■■□□□ 1.84
RNF39-202ENST00000376751 USP42Q9H9J4 1324 aaKnown RBP26.53■■□□□ 1.84
RNF39-202ENST00000376751 UBR2Q8IWV8 1755 aa26.52■■□□□ 1.84
RNF39-202ENST00000376751 PCDH11XQ9BZA7 1347 aa26.52■■□□□ 1.84
RNF39-202ENST00000376751 PCDH11YQ9BZA8 1340 aa26.52■■□□□ 1.84
RNF39-202ENST00000376751 AFDNP55196 1824 aaKnown RBP26.52■■□□□ 1.84
RNF39-202ENST00000376751 ZCRB1Q8TBF4 217 aaKnown RBP26.51■■□□□ 1.83
RNF39-202ENST00000376751 MYD88Q99836 296 aa26.51■■□□□ 1.83
RNF39-202ENST00000376751 METTL22Q9BUU2 404 aaPredicted RBP26.51■■□□□ 1.83
RNF39-202ENST00000376751 RAB3GAP1Q15042 981 aa26.51■■□□□ 1.83
RNF39-202ENST00000376751 TNPO1Q92973 898 aaKnown RBP26.51■■□□□ 1.83
RNF39-202ENST00000376751 HDAC5Q9UQL6 1122 aa26.51■■□□□ 1.83
RNF39-202ENST00000376751 PAPPAQ13219 1627 aa26.5■■□□□ 1.83
RNF39-202ENST00000376751 GCKRQ14397 625 aa26.49■■□□□ 1.83
RNF39-202ENST00000376751 ANO2Q9NQ90 1003 aa26.49■■□□□ 1.83
RNF39-202ENST00000376751 PALD1Q9ULE6 856 aa26.49■■□□□ 1.83
RNF39-202ENST00000376751 NEXNQ0ZGT2 675 aa26.48■■□□□ 1.83
RNF39-202ENST00000376751 ANKRD13DQ6ZTN6 518 aa26.47■■□□□ 1.83
RNF39-202ENST00000376751 CARD10Q9BWT7 1032 aa26.47■■□□□ 1.83
RNF39-202ENST00000376751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.47■■□□□ 1.83
RNF39-202ENST00000376751 KCPQ6ZWJ8 1503 aa26.47■■□□□ 1.83
RNF39-202ENST00000376751 EPHA10Q5JZY3 1008 aa26.47■■□□□ 1.83
RNF39-202ENST00000376751 TTC41PQ6P2S7 1318 aa26.46■■□□□ 1.83
RNF39-202ENST00000376751 ST18O60284 1047 aa26.46■■□□□ 1.83
RNF39-202ENST00000376751 ERC1Q8IUD2 1116 aa26.46■■□□□ 1.83
RNF39-202ENST00000376751 CLASRPQ8N2M8 674 aaKnown RBP26.46■■□□□ 1.83
RNF39-202ENST00000376751 STRN4Q9NRL3 753 aa26.46■■□□□ 1.83
RNF39-202ENST00000376751 IL2RBP14784 551 aa26.45■■□□□ 1.82
RNF39-202ENST00000376751 SASH1O94885 1247 aa26.44■■□□□ 1.82
RNF39-202ENST00000376751 TOGARAM1Q9Y4F4 1720 aa26.44■■□□□ 1.82
RNF39-202ENST00000376751 NKX1-1Q15270 411 aaPredicted RBP26.44■■□□□ 1.82
RNF39-202ENST00000376751 NBPF26B4DH59 902 aa26.43■■□□□ 1.82
RNF39-202ENST00000376751 SSFA2P28290 1259 aa26.43■■□□□ 1.82
RNF39-202ENST00000376751 NBPF14Q5TI25 921 aa26.43■■□□□ 1.82
RNF39-202ENST00000376751 NBPF10Q6P3W6 841 aaKnown RBP26.43■■□□□ 1.82
RNF39-202ENST00000376751 CNTROBQ8N137 903 aa26.43■■□□□ 1.82
RNF39-202ENST00000376751 NBPF15Q8N660 670 aa26.43■■□□□ 1.82
RNF39-202ENST00000376751 JARID2Q92833 1246 aaPredicted RBP26.43■■□□□ 1.82
RNF39-202ENST00000376751 ERVV-2B6SEH9 535 aa26.42■■□□□ 1.82
RNF39-202ENST00000376751 GLRX3O76003 335 aaKnown RBP26.42■■□□□ 1.82
RNF39-202ENST00000376751 MCCP23508 829 aa26.42■■□□□ 1.82
RNF39-202ENST00000376751 KLHDC4Q8TBB5 520 aa26.42■■□□□ 1.82
RNF39-202ENST00000376751 ECHDC1Q9NTX5 307 aa26.42■■□□□ 1.82
RNF39-202ENST00000376751 NUP188Q5SRE5 1749 aa26.42■■□□□ 1.82
RNF39-202ENST00000376751 SGSM2O43147 1006 aa26.41■■□□□ 1.82
RNF39-202ENST00000376751 AACSQ86V21 672 aa26.41■■□□□ 1.82
RNF39-202ENST00000376751 IL17RAQ96F46 866 aa26.41■■□□□ 1.82
RNF39-202ENST00000376751 DDX11L8A8MPP1 907 aa26.4■■□□□ 1.82
RNF39-202ENST00000376751 ANAPC15P60006 121 aa26.4■■□□□ 1.82
RNF39-202ENST00000376751 DDX54Q8TDD1 881 aaKnown RBP26.4■■□□□ 1.82
RNF39-202ENST00000376751 SIL1Q9H173 461 aa26.4■■□□□ 1.82
RNF39-202ENST00000376751 IFIT2P09913 472 aaKnown RBP26.4■■□□□ 1.82
RNF39-202ENST00000376751 NEK4P51957 841 aa26.4■■□□□ 1.82
RNF39-202ENST00000376751 G3BP1Q13283 466 aaKnown RBP eCLIP26.4■■□□□ 1.82
RNF39-202ENST00000376751 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
RNF39-202ENST00000376751 ATP5J2-PTCD1G3V325 749 aa26.39■■□□□ 1.82
RNF39-202ENST00000376751 TRAK2O60296 914 aa26.39■■□□□ 1.82
RNF39-202ENST00000376751 PTCD1O75127 700 aaKnown RBP26.39■■□□□ 1.82
RNF39-202ENST00000376751 EAF2Q96CJ1 260 aaPredicted RBP26.39■■□□□ 1.82
RNF39-202ENST00000376751 PLBD2Q8NHP8 589 aa26.38■■□□□ 1.81
RNF39-202ENST00000376751 ERBB4Q15303 1308 aa26.38■■□□□ 1.81
RNF39-202ENST00000376751 ZGPATQ8N5A5 531 aaKnown RBP26.38■■□□□ 1.81
RNF39-202ENST00000376751 EVA1CP58658 441 aa26.37■■□□□ 1.81
RNF39-202ENST00000376751 UBE3BQ7Z3V4 1068 aa26.37■■□□□ 1.81
RNF39-202ENST00000376751 TLR7Q9NYK1 1049 aaKnown RBP26.37■■□□□ 1.81
RNF39-202ENST00000376751 RAD50Q92878 1312 aa26.37■■□□□ 1.81
RNF39-202ENST00000376751 GPATCH3Q96I76 525 aa26.37■■□□□ 1.81
RNF39-202ENST00000376751 GBP4Q96PP9 640 aa26.37■■□□□ 1.81
RNF39-202ENST00000376751 LSG1Q9H089 658 aaKnown RBP26.37■■□□□ 1.81
RNF39-202ENST00000376751 COL15A1P39059 1388 aa26.36■■□□□ 1.81
RNF39-202ENST00000376751 TJP1Q07157 1748 aa26.36■■□□□ 1.81
RNF39-202ENST00000376751 EPB41L2O43491 1005 aaKnown RBP26.36■■□□□ 1.81
RNF39-202ENST00000376751 HSPA4P34932 840 aa26.36■■□□□ 1.81
RNF39-202ENST00000376751 RFX5P48382 616 aaPredicted RBP26.36■■□□□ 1.81
RNF39-202ENST00000376751 CASP7P55210 303 aa26.36■■□□□ 1.81
RNF39-202ENST00000376751 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
RNF39-202ENST00000376751 CCDC8Q9H0W5 538 aaPredicted RBP26.35■■□□□ 1.81
RNF39-202ENST00000376751 A1BGP04217 495 aa26.35■■□□□ 1.81
RNF39-202ENST00000376751 CWC27Q6UX04 472 aaKnown RBP26.35■■□□□ 1.81
RNF39-202ENST00000376751 CYP2E1P05181 493 aaPredicted RBP26.34■■□□□ 1.81
RNF39-202ENST00000376751 PKP1Q13835 747 aa26.34■■□□□ 1.81
RNF39-202ENST00000376751 RABL6Q3YEC7 729 aaPredicted RBP26.34■■□□□ 1.81
RNF39-202ENST00000376751 A0A087WZG4 1122 aa26.33■■□□□ 1.81
RNF39-202ENST00000376751 TMX3Q96JJ7 454 aa26.33■■□□□ 1.81
RNF39-202ENST00000376751 GZF1Q9H116 711 aaPredicted RBP26.33■■□□□ 1.81
RNF39-202ENST00000376751 COPRSQ9NQ92 184 aa26.33■■□□□ 1.8
RNF39-202ENST00000376751 CLEC17AQ6ZS10 378 aa26.32■■□□□ 1.8
RNF39-202ENST00000376751 UPF3BQ9BZI7 483 aaKnown RBP26.32■■□□□ 1.8
RNF39-202ENST00000376751 DIAPH3Q9NSV4 1193 aa26.31■■□□□ 1.8
RNF39-202ENST00000376751 PTPN12Q05209 780 aaKnown RBP26.31■■□□□ 1.8
RNF39-202ENST00000376751 CWC22Q9HCG8 908 aaKnown RBP26.31■■□□□ 1.8
RNF39-202ENST00000376751 EVI5LQ96CN4 794 aa26.29■■□□□ 1.8
RNF39-202ENST00000376751 MCM2P49736 904 aa26.29■■□□□ 1.8
RNF39-202ENST00000376751 NUCB2P80303 420 aa26.29■■□□□ 1.8
RNF39-202ENST00000376751 BTG4Q9NY30 223 aa26.29■■□□□ 1.8
RNF39-202ENST00000376751 BRPF3Q9ULD4 1205 aa26.29■■□□□ 1.8
RNF39-202ENST00000376751 SNX14Q9Y5W7 946 aa26.29■■□□□ 1.8
RNF39-202ENST00000376751 BAG4O95429 457 aaKnown RBP26.28■■□□□ 1.8
RNF39-202ENST00000376751 NOL8Q76FK4 1167 aaKnown RBP26.28■■□□□ 1.8
RNF39-202ENST00000376751 CUL4AQ13619 759 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms