RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 RLBP1P12271 317 aa29.06■■■□□ 2.24
HLA-C-202ENST00000376237 MAP3K2Q9Y2U5 619 aa29.06■■■□□ 2.24
HLA-C-202ENST00000376237 MYH14Q7Z406 1995 aaKnown RBP29.06■■■□□ 2.24
HLA-C-202ENST00000376237 INTS3Q68E01 1043 aaKnown RBP29.05■■■□□ 2.24
HLA-C-202ENST00000376237 DZIP3Q86Y13 1208 aaKnown RBP29.05■■■□□ 2.24
HLA-C-202ENST00000376237 CCT4P50991 539 aaKnown RBP29.04■■■□□ 2.24
HLA-C-202ENST00000376237 COL15A1P39059 1388 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 PXDNLA1KZ92 1463 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 ERVV-1B6SEH8 477 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 ADRA2BP18089 450 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 SLC4A10Q6U841 1118 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 DEFB132Q7Z7B7 95 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 TMEM57Q8N5G2 664 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 MAP3K15Q6ZN16 1313 aa29.04■■■□□ 2.24
HLA-C-202ENST00000376237 ARXQ96QS3 562 aa29.03■■■□□ 2.24
HLA-C-202ENST00000376237 NEXNQ0ZGT2 675 aa29.02■■■□□ 2.24
HLA-C-202ENST00000376237 MVPQ14764 893 aaKnown RBP29.02■■■□□ 2.24
HLA-C-202ENST00000376237 UPF1Q92900 1129 aaKnown RBP eCLIP29.02■■■□□ 2.24
HLA-C-202ENST00000376237 METTL22Q9BUU2 404 aaPredicted RBP29.02■■■□□ 2.24
HLA-C-202ENST00000376237 SSFA2P28290 1259 aa29.01■■■□□ 2.23
HLA-C-202ENST00000376237 IRX6P78412 446 aaPredicted RBP29.01■■■□□ 2.23
HLA-C-202ENST00000376237 COG6Q9Y2V7 657 aa29.01■■■□□ 2.23
HLA-C-202ENST00000376237 RGL2O15211 777 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 TRAPPC3LQ5T215 181 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 AKT1S1Q96B36 256 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 CHMP4BQ9H444 224 aaKnown RBP29■■■□□ 2.23
HLA-C-202ENST00000376237 ZBTB3Q9H5J0 574 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 DDX19BQ9UMR2 479 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 TBC1D2BQ9UPU7 963 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 ATP10DQ9P241 1426 aa29■■■□□ 2.23
HLA-C-202ENST00000376237 ITPRIPQ8IWB1 547 aa28.99■■■□□ 2.23
HLA-C-202ENST00000376237 BEND3Q5T5X7 828 aa28.99■■■□□ 2.23
HLA-C-202ENST00000376237 GIGYF2Q6Y7W6 1299 aaKnown RBP28.99■■■□□ 2.23
HLA-C-202ENST00000376237 LINS1Q8NG48 757 aa28.99■■■□□ 2.23
HLA-C-202ENST00000376237 CRBNQ96SW2 442 aa28.99■■■□□ 2.23
HLA-C-202ENST00000376237 SRCIN1Q9C0H9 1055 aa28.99■■■□□ 2.23
HLA-C-202ENST00000376237 HSP90AB3PQ58FF7 597 aa28.98■■■□□ 2.23
HLA-C-202ENST00000376237 ERICH6BQ5W0A0 696 aa28.98■■■□□ 2.23
HLA-C-202ENST00000376237 FKBP8Q14318 412 aa28.97■■■□□ 2.23
HLA-C-202ENST00000376237 FLAD1Q8NFF5 587 aa28.97■■■□□ 2.23
HLA-C-202ENST00000376237 ARHGEF1Q92888 912 aaKnown RBP28.97■■■□□ 2.23
HLA-C-202ENST00000376237 TFCP2L1Q9NZI6 479 aa28.97■■■□□ 2.23
HLA-C-202ENST00000376237 ALDH1L1O75891 902 aa28.96■■■□□ 2.23
HLA-C-202ENST00000376237 CAMTA2O94983 1202 aa28.96■■■□□ 2.23
HLA-C-202ENST00000376237 NARFQ9UHQ1 456 aa28.96■■■□□ 2.23
HLA-C-202ENST00000376237 IBTKQ9P2D0 1353 aaPredicted RBP28.96■■■□□ 2.23
HLA-C-202ENST00000376237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.95■■■□□ 2.23
HLA-C-202ENST00000376237 RFC4P35249 363 aa28.95■■■□□ 2.23
HLA-C-202ENST00000376237 TCIRG1Q13488 830 aa28.95■■■□□ 2.23
HLA-C-202ENST00000376237 AAMPQ13685 434 aa28.95■■■□□ 2.23
HLA-C-202ENST00000376237 CLEC4GQ6UXB4 293 aa28.95■■■□□ 2.23
HLA-C-202ENST00000376237 ZNF652Q9Y2D9 606 aa28.95■■■□□ 2.23
HLA-C-202ENST00000376237 ZPR1O75312 459 aa28.94■■■□□ 2.22
HLA-C-202ENST00000376237 ZNF827Q17R98 1081 aa28.94■■■□□ 2.22
HLA-C-202ENST00000376237 MYD88Q99836 296 aa28.94■■■□□ 2.22
HLA-C-202ENST00000376237 PHF14O94880 888 aa28.94■■■□□ 2.22
HLA-C-202ENST00000376237 AMIGO3Q86WK7 504 aa28.94■■■□□ 2.22
HLA-C-202ENST00000376237 STK32BQ9NY57 414 aa28.94■■■□□ 2.22
HLA-C-202ENST00000376237 TRIM28Q13263 835 aaKnown RBP28.93■■■□□ 2.22
HLA-C-202ENST00000376237 EXOC6Q8TAG9 804 aa28.93■■■□□ 2.22
HLA-C-202ENST00000376237 SLC15A2Q16348 729 aa28.92■■■□□ 2.22
HLA-C-202ENST00000376237 HLFQ16534 295 aa28.92■■■□□ 2.22
HLA-C-202ENST00000376237 ARFGEF2Q9Y6D5 1785 aa28.92■■■□□ 2.22
HLA-C-202ENST00000376237 ZBTB7BO15156 539 aaPredicted RBP28.91■■■□□ 2.22
HLA-C-202ENST00000376237 IGKV5-2P06315 115 aa28.91■■■□□ 2.22
HLA-C-202ENST00000376237 UBR3Q6ZT12 1888 aa28.91■■■□□ 2.22
HLA-C-202ENST00000376237 NUP188Q5SRE5 1749 aa28.91■■■□□ 2.22
HLA-C-202ENST00000376237 NEURL1BA8MQ27 555 aa28.9■■■□□ 2.22
HLA-C-202ENST00000376237 SMIM5Q71RC9 77 aa28.9■■■□□ 2.22
HLA-C-202ENST00000376237 CCDC191Q8NCU4 936 aa28.9■■■□□ 2.22
HLA-C-202ENST00000376237 ISCA1Q9BUE6 129 aa28.9■■■□□ 2.22
HLA-C-202ENST00000376237 USP42Q9H9J4 1324 aaKnown RBP28.9■■■□□ 2.22
HLA-C-202ENST00000376237 CWF19L2Q2TBE0 894 aaKnown RBP28.89■■■□□ 2.21
HLA-C-202ENST00000376237 ATP5J2-PTCD1G3V325 749 aa28.88■■■□□ 2.21
HLA-C-202ENST00000376237 USPL1Q5W0Q7 1092 aa28.88■■■□□ 2.21
HLA-C-202ENST00000376237 ANO8Q9HCE9 1232 aaPredicted RBP28.88■■■□□ 2.21
HLA-C-202ENST00000376237 N4BP2Q86UW6 1770 aaPredicted RBP28.87■■■□□ 2.21
HLA-C-202ENST00000376237 GNAI3P08754 354 aa28.87■■■□□ 2.21
HLA-C-202ENST00000376237 GCKRQ14397 625 aa28.86■■■□□ 2.21
HLA-C-202ENST00000376237 ZNF34Q8IZ26 560 aa28.86■■■□□ 2.21
HLA-C-202ENST00000376237 USP44Q9H0E7 712 aa28.86■■■□□ 2.21
HLA-C-202ENST00000376237 ZBTB40Q9NUA8 1239 aa28.86■■■□□ 2.21
HLA-C-202ENST00000376237 CWC25Q9NXE8 425 aaPredicted RBP28.86■■■□□ 2.21
HLA-C-202ENST00000376237 SRP68Q9UHB9 627 aaKnown RBP28.86■■■□□ 2.21
HLA-C-202ENST00000376237 C9orf78Q9NZ63 289 aaPredicted RBP28.85■■■□□ 2.21
HLA-C-202ENST00000376237 HDAC5Q9UQL6 1122 aa28.85■■■□□ 2.21
HLA-C-202ENST00000376237 PARP10Q53GL7 1025 aa28.84■■■□□ 2.21
HLA-C-202ENST00000376237 BCL2L12Q9HB09 334 aa28.84■■■□□ 2.21
HLA-C-202ENST00000376237 BCORQ6W2J9 1755 aa28.84■■■□□ 2.21
HLA-C-202ENST00000376237 GRM8O00222 908 aa28.84■■■□□ 2.21
HLA-C-202ENST00000376237 COL23A1Q86Y22 540 aaPredicted RBP28.84■■■□□ 2.21
HLA-C-202ENST00000376237 MEIS3Q99687 375 aa28.84■■■□□ 2.21
HLA-C-202ENST00000376237 PNPLA7Q6ZV29 1317 aa28.83■■■□□ 2.21
HLA-C-202ENST00000376237 SCN7AQ01118 1682 aa28.83■■■□□ 2.21
HLA-C-202ENST00000376237 NLRP10Q86W26 655 aa28.83■■■□□ 2.21
HLA-C-202ENST00000376237 UTYO14607 1347 aa28.83■■■□□ 2.21
HLA-C-202ENST00000376237 C4AP0C0L4 1744 aa28.82■■■□□ 2.2
HLA-C-202ENST00000376237 NIP7Q9Y221 180 aaKnown RBP eCLIP28.82■■■□□ 2.2
HLA-C-202ENST00000376237 GTF3C3Q9Y5Q9 886 aa28.82■■■□□ 2.2
HLA-C-202ENST00000376237 NUP98P52948 1817 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms