RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 USP25Q9UHP3 1055 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 PLEKHG1Q9ULL1 1385 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 HIP1O00291 1037 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 SF3A1Q15459 793 aaKnown RBP12.66□□□□□ -0.38
ZNF549-202ENST00000376233 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 TMEM131LA2VDJ0 1609 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 PREX1Q8TCU6 1659 aa12.65□□□□□ -0.38
ZNF549-202ENST00000376233 A0A087WZG4 1122 aa12.65□□□□□ -0.38
ZNF549-202ENST00000376233 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
ZNF549-202ENST00000376233 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
ZNF549-202ENST00000376233 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.38
ZNF549-202ENST00000376233 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
ZNF549-202ENST00000376233 CLTCQ00610 1675 aaKnown RBP12.65□□□□□ -0.38
ZNF549-202ENST00000376233 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
ZNF549-202ENST00000376233 EVI5LQ96CN4 794 aa12.65□□□□□ -0.38
ZNF549-202ENST00000376233 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
ZNF549-202ENST00000376233 RBM8AQ9Y5S9 174 aaKnown RBP12.65□□□□□ -0.38
ZNF549-202ENST00000376233 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
ZNF549-202ENST00000376233 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
ZNF549-202ENST00000376233 BICC1Q9H694 974 aaKnown RBP12.64□□□□□ -0.39
ZNF549-202ENST00000376233 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
ZNF549-202ENST00000376233 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
ZNF549-202ENST00000376233 APPP05067 770 aa12.64□□□□□ -0.39
ZNF549-202ENST00000376233 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
ZNF549-202ENST00000376233 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
ZNF549-202ENST00000376233 HCLS1P14317 486 aaPredicted RBP12.64□□□□□ -0.39
ZNF549-202ENST00000376233 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
ZNF549-202ENST00000376233 SGSM2O43147 1006 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 KRT85P78386 507 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
ZNF549-202ENST00000376233 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 ADGRB2O60241 1585 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
ZNF549-202ENST00000376233 NMIQ13287 307 aaPredicted RBP12.63□□□□□ -0.39
ZNF549-202ENST00000376233 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 LINS1Q8NG48 757 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 FAM177BA6PVY3 158 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 PDCP20941 246 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
ZNF549-202ENST00000376233 FAM227BQ96M60 508 aa12.63□□□□□ -0.39
ZNF549-202ENST00000376233 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
ZNF549-202ENST00000376233 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
ZNF549-202ENST00000376233 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
ZNF549-202ENST00000376233 GOLGA6L6A8MZA4 724 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
ZNF549-202ENST00000376233 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
ZNF549-202ENST00000376233 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 SYT1P21579 422 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 BEND3Q5T5X7 828 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 SUCLG2Q96I99 432 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 BECN2A8MW95 431 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 ALDH1L1O75891 902 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 FAM173BQ6P4H8 233 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 VSIG10Q8N0Z9 540 aa12.62□□□□□ -0.39
ZNF549-202ENST00000376233 GOLGA6L19H0YKK7 550 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 SASS6Q6UVJ0 657 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 CKAP2LQ8IYA6 745 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
ZNF549-202ENST00000376233 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 CPLX1O14810 134 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 CCDC183Q5T5S1 534 aa12.61□□□□□ -0.39
ZNF549-202ENST00000376233 CRB1P82279 1406 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 ATP10DQ9P241 1426 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 HSPA4P34932 840 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 INTS4Q96HW7 963 aaKnown RBP12.6□□□□□ -0.39
ZNF549-202ENST00000376233 RAD50Q92878 1312 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 PTH1RQ03431 593 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
ZNF549-202ENST00000376233 BRD1O95696 1058 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 TNMDQ9H2S6 317 aa12.6□□□□□ -0.39
ZNF549-202ENST00000376233 GOLIM4O00461 696 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 TRIM5Q9C035 493 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
ZNF549-202ENST00000376233 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
ZNF549-202ENST00000376233 CCDC192P0DO97 292 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 TTC41PQ6P2S7 1318 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 F13A1P00488 732 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 CREB3L3Q68CJ9 461 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
ZNF549-202ENST00000376233 ZNF445P59923 1031 aa12.58□□□□□ -0.39
ZNF549-202ENST00000376233 CCT2P78371 535 aaKnown RBP12.58□□□□□ -0.39
ZNF549-202ENST00000376233 NUP62CLQ9H1M0 184 aa12.58□□□□□ -0.39
ZNF549-202ENST00000376233 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
ZNF549-202ENST00000376233 LETM1O95202 739 aaPredicted RBP12.58□□□□□ -0.4
ZNF549-202ENST00000376233 SNRPA1P09661 255 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms