RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
PTCH1-203ENST00000375274 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
PTCH1-203ENST00000375274 ATP8B2P98198 1209 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
PTCH1-203ENST00000375274 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-203ENST00000375274 GBP3Q9H0R5 595 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 ZNF213O14771 459 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
PTCH1-203ENST00000375274 RDXP35241 583 aaKnown RBP13.42□□□□□ -0.26
PTCH1-203ENST00000375274 KIF4BQ2VIQ3 1234 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 CCDC186Q7Z3E2 898 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 TMC6Q7Z403 805 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-203ENST00000375274 RRAGDQ9NQL2 400 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-203ENST00000375274 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 ACEP12821 1306 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 TXLNBQ8N3L3 684 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 CCDC196A0A1B0GTZ2 297 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 GOLGA6L10A6NI86 522 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 ZBTB7BO15156 539 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-203ENST00000375274 F13A1P00488 732 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 CNNM3Q8NE01 707 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 NAPBQ9H115 298 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 RAI14Q9P0K7 980 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 DNM1Q05193 864 aaKnown RBP13.42□□□□□ -0.26
PTCH1-203ENST00000375274 ODF2Q5BJF6 829 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 BRF1Q92994 677 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 PHACTR3Q96KR7 559 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 ABCF2Q9UG63 623 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 PHF8Q9UPP1 1060 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 PAXBP1Q9Y5B6 917 aa13.42□□□□□ -0.26
PTCH1-203ENST00000375274 KIF5CO60282 957 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 IQCEQ6IPM2 695 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
PTCH1-203ENST00000375274 GOLIM4O00461 696 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 KIAA1328Q86T90 577 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-203ENST00000375274 RBM8AQ9Y5S9 174 aaKnown RBP13.41□□□□□ -0.26
PTCH1-203ENST00000375274 ITSN2Q9NZM3 1697 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 PPFIA3O75145 1194 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 FAM193AP78312 1265 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 SNW1Q13573 536 aaKnown RBP13.41□□□□□ -0.26
PTCH1-203ENST00000375274 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
PTCH1-203ENST00000375274 CEP135Q66GS9 1140 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 PLCH2O75038 1416 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-203ENST00000375274 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 ANO6Q4KMQ2 910 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 UBE3BQ7Z3V4 1068 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 CRACR2AQ9BSW2 395 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 ZHX3Q9H4I2 956 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 ZHX1Q9UKY1 873 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-203ENST00000375274 INSRP06213 1382 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 ZMYM4Q5VZL5 1548 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 SYCP2Q9BX26 1530 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 PIBF1Q8WXW3 757 aa13.4□□□□□ -0.26
PTCH1-203ENST00000375274 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.27
PTCH1-203ENST00000375274 CASQ1P31415 396 aa13.39□□□□□ -0.27
PTCH1-203ENST00000375274 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
PTCH1-203ENST00000375274 CCDC148Q8NFR7 591 aa13.39□□□□□ -0.27
PTCH1-203ENST00000375274 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
PTCH1-203ENST00000375274 FOXO3O43524 673 aa13.39□□□□□ -0.27
PTCH1-203ENST00000375274 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-203ENST00000375274 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
PTCH1-203ENST00000375274 ERLIN2O94905 339 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 SKILP12757 684 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
PTCH1-203ENST00000375274 SLC12A7Q9Y666 1083 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 STARD3NLO95772 234 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 CENPHQ9H3R5 247 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTCH1-203ENST00000375274 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 CALCOCO1Q9P1Z2 691 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 CCDC171Q6TFL3 1326 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 IGHMBP2P38935 993 aaKnown RBP13.38□□□□□ -0.27
PTCH1-203ENST00000375274 AK2P54819 239 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 HAND2P61296 217 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
PTCH1-203ENST00000375274 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 IFIT3O14879 490 aaKnown RBP13.37□□□□□ -0.27
PTCH1-203ENST00000375274 CHMLP26374 656 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 ISM2Q6H9L7 571 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms