RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ARAFP10398 606 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 RASSF7Q02833 373 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 USP17L24Q0WX57 530 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 LAMC2Q13753 1193 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
USP48-202ENST00000374730 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 SLCO4C1Q6ZQN7 724 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 C7orf43Q8WVR3 580 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 VRTNQ9H8Y1 702 aa8.07□□□□□ -1.12
USP48-202ENST00000374730 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
USP48-202ENST00000374730 ZNF777Q9ULD5 760 aaPredicted RBP8.07□□□□□ -1.12
USP48-202ENST00000374730 KHNYNO15037 678 aaKnown RBP8.06□□□□□ -1.12
USP48-202ENST00000374730 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
USP48-202ENST00000374730 SH3PXD2AQ5TCZ1 1133 aa8.06□□□□□ -1.12
USP48-202ENST00000374730 SCRIBQ14160 1630 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 C21orf2O43822 256 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
USP48-202ENST00000374730 DPYDQ12882 1025 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 ANKMY2Q8IV38 441 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 TMEM151AQ8N4L1 468 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 RHPN1Q8TCX5 695 aa8.05□□□□□ -1.12
USP48-202ENST00000374730 PHF20L1A8MW92 1017 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 GALNT6Q8NCL4 622 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 EDARADDQ8WWZ3 215 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 C2orf49Q9BVC5 232 aaPredicted RBP8.04□□□□□ -1.12
USP48-202ENST00000374730 PHACTR1Q9C0D0 580 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 GGA1Q9UJY5 639 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 HCN2Q9UL51 889 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
USP48-202ENST00000374730 SHISA8B8ZZ34 492 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 GDF11O95390 407 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 CD33P20138 364 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 IRS1P35568 1242 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 LRRC69Q6ZNQ3 347 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 C1orf229Q6ZS94 237 aaPredicted RBP8.03□□□□□ -1.12
USP48-202ENST00000374730 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
USP48-202ENST00000374730 NEUROD4Q9HD90 331 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 MARK1Q9P0L2 795 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 ANKIB1Q9P2G1 1089 aa8.03□□□□□ -1.12
USP48-202ENST00000374730 IGFBP4P22692 258 aa8.02□□□□□ -1.13
USP48-202ENST00000374730 ADH6P28332 368 aa8.02□□□□□ -1.13
USP48-202ENST00000374730 HIF1AQ16665 826 aa8.02□□□□□ -1.13
USP48-202ENST00000374730 ZNF468Q5VIY5 522 aaPredicted RBP8.02□□□□□ -1.13
USP48-202ENST00000374730 SCG3Q8WXD2 468 aaKnown RBP8.02□□□□□ -1.13
USP48-202ENST00000374730 ARXQ96QS3 562 aa8.02□□□□□ -1.13
USP48-202ENST00000374730 HCN4Q9Y3Q4 1203 aa8.02□□□□□ -1.13
USP48-202ENST00000374730 EPXP11678 715 aa8.01□□□□□ -1.13
USP48-202ENST00000374730 HINFPQ9BQA5 517 aa8.01□□□□□ -1.13
USP48-202ENST00000374730 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
USP48-202ENST00000374730 STRN4Q9NRL3 753 aa8.01□□□□□ -1.13
USP48-202ENST00000374730 DNMT3AQ9Y6K1 912 aaPredicted RBP8.01□□□□□ -1.13
USP48-202ENST00000374730 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
USP48-202ENST00000374730 ALDH16A1Q8IZ83 802 aa8□□□□□ -1.13
USP48-202ENST00000374730 CNTNAP5Q8WYK1 1306 aa8□□□□□ -1.13
USP48-202ENST00000374730 MKL2Q9ULH7 1088 aa7.99□□□□□ -1.13
USP48-202ENST00000374730 PRR12Q9ULL5 1215 aa7.99□□□□□ -1.13
USP48-202ENST00000374730 KCNQ4P56696 695 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 TYRO3Q06418 890 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 RTN1Q16799 776 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 CHMP7Q8WUX9 453 aaPredicted RBP7.98□□□□□ -1.13
USP48-202ENST00000374730 HSH2DQ96JZ2 352 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 SUSD3Q96L08 255 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 KLF15Q9UIH9 416 aa7.98□□□□□ -1.13
USP48-202ENST00000374730 FOXO3O43524 673 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 WEE1P30291 646 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 SNRPNP63162 240 aaKnown RBP7.97□□□□□ -1.13
USP48-202ENST00000374730 IER5Q5VY09 327 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 FAM200AQ8TCP9 573 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 BTBD6Q96KE9 485 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 BRD7Q9NPI1 651 aa7.97□□□□□ -1.13
USP48-202ENST00000374730 PIK3R2O00459 728 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.14
USP48-202ENST00000374730 RFX1P22670 979 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 AMPD1P23109 780 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 ELOAQ14241 798 aaKnown RBP7.96□□□□□ -1.14
USP48-202ENST00000374730 ZNF280CQ8ND82 737 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 CEP63Q96MT8 703 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 RRAGCQ9HB90 399 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 GTF3C3Q9Y5Q9 886 aa7.96□□□□□ -1.14
USP48-202ENST00000374730 SIN3BO75182 1162 aa7.95□□□□□ -1.14
USP48-202ENST00000374730 DGKGP49619 791 aa7.95□□□□□ -1.14
USP48-202ENST00000374730 PCBP4P57723 403 aaKnown RBP7.95□□□□□ -1.14
USP48-202ENST00000374730 SFSWAPQ12872 951 aaKnown RBP7.95□□□□□ -1.14
USP48-202ENST00000374730 SWI5Q1ZZU3 235 aa7.95□□□□□ -1.14
USP48-202ENST00000374730 CHSY3Q70JA7 882 aa7.95□□□□□ -1.14
USP48-202ENST00000374730 ALYREFQ86V81 257 aaKnown RBP7.95□□□□□ -1.14
USP48-202ENST00000374730 NGLY1Q96IV0 654 aa7.95□□□□□ -1.14
USP48-202ENST00000374730 NOVA2Q9UNW9 492 aaKnown RBP7.95□□□□□ -1.14
USP48-202ENST00000374730 RB1CC1Q8TDY2 1594 aa7.95□□□□□ -1.14
USP48-202ENST00000374730 TGFBR3LH3BV60 316 aa7.94□□□□□ -1.14
USP48-202ENST00000374730 BTLAQ7Z6A9 289 aa7.94□□□□□ -1.14
USP48-202ENST00000374730 SYT9Q86SS6 491 aa7.94□□□□□ -1.14
USP48-202ENST00000374730 DCAF5Q96JK2 942 aa7.94□□□□□ -1.14
USP48-202ENST00000374730 MDFIQ99750 246 aa7.94□□□□□ -1.14
USP48-202ENST00000374730 KCNH4Q9UQ05 1017 aa7.94□□□□□ -1.14
USP48-202ENST00000374730 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
USP48-202ENST00000374730 ELOA3CA0A087WX78 387 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms