RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 MRE11P49959 708 aa6.54□□□□□ -1.36
SRRM1-202ENST00000374389 PLEKHO1Q53GL0 409 aaPredicted RBP6.54□□□□□ -1.36
SRRM1-202ENST00000374389 TMX3Q96JJ7 454 aa6.54□□□□□ -1.36
SRRM1-202ENST00000374389 HEG1Q9ULI3 1381 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 GIGYF1O75420 1035 aaPredicted RBP6.53□□□□□ -1.36
SRRM1-202ENST00000374389 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 NOL8Q76FK4 1167 aaKnown RBP6.53□□□□□ -1.36
SRRM1-202ENST00000374389 OTUD5Q96G74 571 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 UPF3BQ9BZI7 483 aaKnown RBP6.53□□□□□ -1.36
SRRM1-202ENST00000374389 LMBRD1Q9NUN5 540 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 AK9Q5TCS8 1911 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 LMO7Q8WWI1 1683 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 BCCIPQ9P287 314 aaKnown RBP eCLIP6.53□□□□□ -1.36
SRRM1-202ENST00000374389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.53□□□□□ -1.36
SRRM1-202ENST00000374389 AOX1Q06278 1338 aa6.53□□□□□ -1.36
SRRM1-202ENST00000374389 NUCB2P80303 420 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 KLHL40Q2TBA0 621 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 CWF19L2Q2TBE0 894 aaKnown RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 SKOR2Q2VWA4 1001 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 FOXD4L5Q5VV16 416 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 FOXD4L4Q8WXT5 416 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 DDX17Q92841 729 aaKnown RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 MAP3K2Q9Y2U5 619 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 RAB11FIP3O75154 756 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 AMOTQ4VCS5 1084 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 IL17RAQ96F46 866 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 KAZALD1Q96I82 304 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 ZMYND15Q9H091 742 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 PA2G4Q9UQ80 394 aaKnown RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 DDX49Q9Y6V7 483 aaKnown RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 CACNA1FO60840 1977 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 ERBB3P21860 1342 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 ZC3H6P61129 1189 aaKnown RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 CUL4AQ13619 759 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 C1orf141Q5JVX7 400 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 KRT28Q7Z3Y7 464 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 KIF1BPQ96EK5 621 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 CWC22Q9HCG8 908 aaKnown RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 DBF4Q9UBU7 674 aaPredicted RBP6.52□□□□□ -1.37
SRRM1-202ENST00000374389 ADAMTSL3P82987 1691 aa6.52□□□□□ -1.37
SRRM1-202ENST00000374389 C1orf167Q5SNV9 1468 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 SLC39A6Q13433 755 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 MTX1Q13505 466 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 PDIA6Q15084 440 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 GPT2Q8TD30 523 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 NSFL1CQ9UNZ2 370 aaKnown RBP6.51□□□□□ -1.37
SRRM1-202ENST00000374389 TRPM3Q9HCF6 1732 aaPredicted RBP6.51□□□□□ -1.37
SRRM1-202ENST00000374389 ERBB4Q15303 1308 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 SGSM2O43147 1006 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 HSPA4P34932 840 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 ANAPC15P60006 121 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 KSR2Q6VAB6 950 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 RASEFQ8IZ41 740 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 CERKQ8TCT0 537 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 SUCLG2Q96I99 432 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 LSG1Q9H089 658 aaKnown RBP6.51□□□□□ -1.37
SRRM1-202ENST00000374389 RBM27Q9P2N5 1060 aaKnown RBP6.51□□□□□ -1.37
SRRM1-202ENST00000374389 CAMTA1Q9Y6Y1 1673 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 RAD50Q92878 1312 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 OVOS2A0A0G2JMS6 1433 aa6.51□□□□□ -1.37
SRRM1-202ENST00000374389 KDM6AO15550 1401 aaPredicted RBP6.51□□□□□ -1.37
SRRM1-202ENST00000374389 GOLGA6L22H0YM25 854 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 PRPF40AO75400 957 aaKnown RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 CAVIN1Q6NZI2 390 aaKnown RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 ISY1Q9ULR0 285 aaKnown RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 USP42Q9H9J4 1324 aaKnown RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 BRD1O95696 1058 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 PTMSP20962 102 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 PROSER2Q86WR7 435 aaPredicted RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 ALDH1L1O75891 902 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 IGKV5-2P06315 115 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 MCCP23508 829 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 AIMP1Q12904 312 aaKnown RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 CWC27Q6UX04 472 aaKnown RBP6.5□□□□□ -1.37
SRRM1-202ENST00000374389 SPG7Q9UQ90 795 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 SNX14Q9Y5W7 946 aa6.5□□□□□ -1.37
SRRM1-202ENST00000374389 MEGF6O75095 1541 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 DTNBO60941 627 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 CPA1P15085 419 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 COL9A3Q14050 684 aaPredicted RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 ZSCAN23Q3MJ62 389 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 VSIG10Q8N0Z9 540 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 LARP6Q9BRS8 491 aaKnown RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 C9orf78Q9NZ63 289 aaPredicted RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 CRYBG1Q9Y4K1 1723 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 ADAMTS7Q9UKP4 1686 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 SASH1O94885 1247 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 NCLP19338 710 aaKnown RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 PIP4K2AP48426 406 aaPredicted RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 ZNF445P59923 1031 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 OS9Q13438 667 aaPredicted RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 LINS1Q8NG48 757 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 KLHDC4Q8TBB5 520 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 TTC14Q96N46 770 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 BICC1Q9H694 974 aaKnown RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 TLR7Q9NYK1 1049 aaKnown RBP6.49□□□□□ -1.37
SRRM1-202ENST00000374389 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
SRRM1-202ENST00000374389 NPHP3Q7Z494 1330 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms