RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 SNRPA1P09661 255 aaKnown RBP19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 MTX1Q13505 466 aa19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 DDX54Q8TDD1 881 aaKnown RBP19.48■□□□□ 0.71
CNKSR1-202ENST00000374253 NEURL1BA8MQ27 555 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 AACSQ86V21 672 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 DDX11L8A8MPP1 907 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 NEXNQ0ZGT2 675 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 FOXD4L5Q5VV16 416 aaPredicted RBP19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 ANKRD13DQ6ZTN6 518 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 FOXD4L4Q8WXT5 416 aaPredicted RBP19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 GBP4Q96PP9 640 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 FMNL2Q96PY5 1086 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 AOX1Q06278 1338 aa19.47■□□□□ 0.71
CNKSR1-202ENST00000374253 IFIT2P09913 472 aaKnown RBP19.46■□□□□ 0.71
CNKSR1-202ENST00000374253 SASH1O94885 1247 aa19.46■□□□□ 0.71
CNKSR1-202ENST00000374253 CHAMP1Q96JM3 812 aa19.46■□□□□ 0.71
CNKSR1-202ENST00000374253 TLR7Q9NYK1 1049 aaKnown RBP19.46■□□□□ 0.71
CNKSR1-202ENST00000374253 MCCP23508 829 aa19.45■□□□□ 0.7
CNKSR1-202ENST00000374253 GCKRQ14397 625 aa19.45■□□□□ 0.7
CNKSR1-202ENST00000374253 CNTROBQ8N137 903 aa19.45■□□□□ 0.7
CNKSR1-202ENST00000374253 LRP10Q7Z4F1 713 aa19.45■□□□□ 0.7
CNKSR1-202ENST00000374253 CPDO75976 1380 aa19.44■□□□□ 0.7
CNKSR1-202ENST00000374253 METTL22Q9BUU2 404 aaPredicted RBP19.44■□□□□ 0.7
CNKSR1-202ENST00000374253 G3BP1Q13283 466 aaKnown RBP eCLIP19.44■□□□□ 0.7
CNKSR1-202ENST00000374253 ZCRB1Q8TBF4 217 aaKnown RBP19.44■□□□□ 0.7
CNKSR1-202ENST00000374253 EAF2Q96CJ1 260 aaPredicted RBP19.44■□□□□ 0.7
CNKSR1-202ENST00000374253 WDR17Q8IZU2 1322 aa19.43■□□□□ 0.7
CNKSR1-202ENST00000374253 UBE3BQ7Z3V4 1068 aa19.43■□□□□ 0.7
CNKSR1-202ENST00000374253 TMX3Q96JJ7 454 aa19.43■□□□□ 0.7
CNKSR1-202ENST00000374253 KDM4FA0A1W2PPD8 638 aa19.43■□□□□ 0.7
CNKSR1-202ENST00000374253 LARP6Q9BRS8 491 aaKnown RBP19.43■□□□□ 0.7
CNKSR1-202ENST00000374253 SGSM2O43147 1006 aa19.42■□□□□ 0.7
CNKSR1-202ENST00000374253 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
CNKSR1-202ENST00000374253 GLRX3O76003 335 aaKnown RBP19.42■□□□□ 0.7
CNKSR1-202ENST00000374253 UTYO14607 1347 aa19.41■□□□□ 0.7
CNKSR1-202ENST00000374253 BAG4O95429 457 aaKnown RBP19.41■□□□□ 0.7
CNKSR1-202ENST00000374253 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 A1BGP04217 495 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 MCTP1Q6DN14 999 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 DIAPH3Q9NSV4 1193 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 SOS2Q07890 1332 aaPredicted RBP19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 TTC41PQ6P2S7 1318 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 EVA1CP58658 441 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 ERC1Q8IUD2 1116 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 RASEFQ8IZ41 740 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 BOLA2Q9H3K6 86 aa19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 CCDC9Q9Y3X0 531 aaKnown RBP19.4■□□□□ 0.7
CNKSR1-202ENST00000374253 LMTK3Q96Q04 1460 aa19.39■□□□□ 0.7
CNKSR1-202ENST00000374253 DTNBO60941 627 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 CPA1P15085 419 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 TTLL7Q6ZT98 887 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 HDAC5Q9UQL6 1122 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 ZNF330Q9Y3S2 320 aaPredicted RBP19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 A0A087WZG4 1122 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 GOLGA6L3A6NEY3 463 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 HSPA4P34932 840 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 LSG1Q9H089 658 aaKnown RBP19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 ZDHHC9Q9Y397 364 aa19.39■□□□□ 0.69
CNKSR1-202ENST00000374253 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 PCDH11XQ9BZA7 1347 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 PCDH11YQ9BZA8 1340 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 COL5A2P05997 1499 aaPredicted RBP19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 PTH1RQ03431 593 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 GPATCH3Q96I76 525 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 PANK2Q9BZ23 570 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 CHMP3Q9Y3E7 222 aa19.38■□□□□ 0.69
CNKSR1-202ENST00000374253 RAD50Q92878 1312 aa19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 MRC1P22897 1456 aa19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 IL2RBP14784 551 aa19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 KIAA1211Q6ZU35 1233 aa19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 EDC3Q96F86 508 aaKnown RBP19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 ZBTB3Q9H5J0 574 aa19.37■□□□□ 0.69
CNKSR1-202ENST00000374253 NUCB2P80303 420 aa19.36■□□□□ 0.69
CNKSR1-202ENST00000374253 FAM227BQ96M60 508 aa19.36■□□□□ 0.69
CNKSR1-202ENST00000374253 SNX14Q9Y5W7 946 aa19.36■□□□□ 0.69
CNKSR1-202ENST00000374253 CYP2E1P05181 493 aaPredicted RBP19.36■□□□□ 0.69
CNKSR1-202ENST00000374253 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
CNKSR1-202ENST00000374253 ANAPC15P60006 121 aa19.36■□□□□ 0.69
CNKSR1-202ENST00000374253 FOXD4L6Q3SYB3 417 aaPredicted RBP19.35■□□□□ 0.69
CNKSR1-202ENST00000374253 FOXD4L3Q6VB84 417 aaPredicted RBP19.35■□□□□ 0.69
CNKSR1-202ENST00000374253 CWC22Q9HCG8 908 aaKnown RBP19.34■□□□□ 0.69
CNKSR1-202ENST00000374253 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
CNKSR1-202ENST00000374253 TFCP2Q12800 502 aa19.34■□□□□ 0.69
CNKSR1-202ENST00000374253 KAT6BQ8WYB5 2073 aa19.34■□□□□ 0.69
CNKSR1-202ENST00000374253 GOLGA6L22H0YM25 854 aa19.33■□□□□ 0.69
CNKSR1-202ENST00000374253 PTPN12Q05209 780 aaKnown RBP19.33■□□□□ 0.69
CNKSR1-202ENST00000374253 PLBD2Q8NHP8 589 aa19.33■□□□□ 0.69
CNKSR1-202ENST00000374253 DDX49Q9Y6V7 483 aaKnown RBP19.33■□□□□ 0.69
CNKSR1-202ENST00000374253 FSD2A1L4K1 749 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms