RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
A1CF-204ENST00000373997 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
A1CF-204ENST00000373997 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
A1CF-204ENST00000373997 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
A1CF-204ENST00000373997 TJP1Q07157 1748 aa16.33■□□□□ 0.21
A1CF-204ENST00000373997 DDIT3P35638 169 aa16.33■□□□□ 0.21
A1CF-204ENST00000373997 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.21
A1CF-204ENST00000373997 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.21
A1CF-204ENST00000373997 BARGINQ6ZT62 677 aa16.33■□□□□ 0.21
A1CF-204ENST00000373997 LRP10Q7Z4F1 713 aa16.33■□□□□ 0.21
A1CF-204ENST00000373997 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
A1CF-204ENST00000373997 HMMRO75330 724 aa16.33■□□□□ 0.2
A1CF-204ENST00000373997 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.2
A1CF-204ENST00000373997 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.2
A1CF-204ENST00000373997 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
A1CF-204ENST00000373997 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
A1CF-204ENST00000373997 APBB1O00213 710 aa16.32■□□□□ 0.2
A1CF-204ENST00000373997 MEX3CQ5U5Q3 659 aaKnown RBP16.32■□□□□ 0.2
A1CF-204ENST00000373997 NBPF26B4DH59 902 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 TRAK2O60296 914 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 A1BGP04217 495 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
A1CF-204ENST00000373997 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
A1CF-204ENST00000373997 VPS72Q15906 364 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 NBPF14Q5TI25 921 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
A1CF-204ENST00000373997 NBPF15Q8N660 670 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 MARCH10Q8NA82 808 aaPredicted RBP16.31■□□□□ 0.2
A1CF-204ENST00000373997 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
A1CF-204ENST00000373997 PNMA6EA0A0J9YXQ4 647 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 USP21Q9UK80 565 aa16.31■□□□□ 0.2
A1CF-204ENST00000373997 ERBB4Q15303 1308 aa16.3■□□□□ 0.2
A1CF-204ENST00000373997 C9orf78Q9NZ63 289 aaPredicted RBP16.3■□□□□ 0.2
A1CF-204ENST00000373997 ANKRD13DQ6ZTN6 518 aa16.3■□□□□ 0.2
A1CF-204ENST00000373997 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
A1CF-204ENST00000373997 FNBP4Q8N3X1 1017 aaPredicted RBP16.3■□□□□ 0.2
A1CF-204ENST00000373997 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
A1CF-204ENST00000373997 MYD88Q99836 296 aa16.3■□□□□ 0.2
A1CF-204ENST00000373997 PTMSP20962 102 aa16.29■□□□□ 0.2
A1CF-204ENST00000373997 NEXNQ0ZGT2 675 aa16.29■□□□□ 0.2
A1CF-204ENST00000373997 THSD7AQ9UPZ6 1657 aa16.29■□□□□ 0.2
A1CF-204ENST00000373997 ATP8B2P98198 1209 aa16.28■□□□□ 0.2
A1CF-204ENST00000373997 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
A1CF-204ENST00000373997 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
A1CF-204ENST00000373997 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
A1CF-204ENST00000373997 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
A1CF-204ENST00000373997 ZNF330Q9Y3S2 320 aaPredicted RBP16.28■□□□□ 0.2
A1CF-204ENST00000373997 SMARCA5O60264 1052 aaPredicted RBP16.27■□□□□ 0.2
A1CF-204ENST00000373997 MRE11P49959 708 aa16.27■□□□□ 0.19
A1CF-204ENST00000373997 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.19
A1CF-204ENST00000373997 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
A1CF-204ENST00000373997 GRM8O00222 908 aa16.26■□□□□ 0.19
A1CF-204ENST00000373997 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
A1CF-204ENST00000373997 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
A1CF-204ENST00000373997 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
A1CF-204ENST00000373997 GBP4Q96PP9 640 aa16.26■□□□□ 0.19
A1CF-204ENST00000373997 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
A1CF-204ENST00000373997 AFF2P51816 1311 aa16.25■□□□□ 0.19
A1CF-204ENST00000373997 ANKRD36CQ5JPF3 1778 aa16.25■□□□□ 0.19
A1CF-204ENST00000373997 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
A1CF-204ENST00000373997 KIF2CQ99661 725 aa16.25■□□□□ 0.19
A1CF-204ENST00000373997 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
A1CF-204ENST00000373997 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 SRGAP3O43295 1099 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 RAB3GAP1Q15042 981 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 C16orf71Q8IYS4 520 aaPredicted RBP16.24■□□□□ 0.19
A1CF-204ENST00000373997 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 CDC45O75419 566 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 STARD3NLO95772 234 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
A1CF-204ENST00000373997 SSH3Q8TE77 659 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 SUCLG2Q96I99 432 aa16.24■□□□□ 0.19
A1CF-204ENST00000373997 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
A1CF-204ENST00000373997 BTAF1O14981 1849 aa16.23■□□□□ 0.19
A1CF-204ENST00000373997 NUP98P52948 1817 aa16.23■□□□□ 0.19
A1CF-204ENST00000373997 GCKRQ14397 625 aa16.23■□□□□ 0.19
A1CF-204ENST00000373997 SBF2Q86WG5 1849 aa16.23■□□□□ 0.19
A1CF-204ENST00000373997 K7ELQ4 463 aaPredicted RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 OTUD7AQ8TE49 926 aaPredicted RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 UTYO14607 1347 aa16.22■□□□□ 0.19
A1CF-204ENST00000373997 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 TUBGCP6Q96RT7 1819 aa16.22■□□□□ 0.19
A1CF-204ENST00000373997 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
A1CF-204ENST00000373997 POLA2Q14181 598 aa16.22■□□□□ 0.19
A1CF-204ENST00000373997 NHSQ6T4R5 1651 aa16.21■□□□□ 0.19
A1CF-204ENST00000373997 CICQ96RK0 1608 aaPredicted RBP16.21■□□□□ 0.19
A1CF-204ENST00000373997 KCNQ2O43526 872 aa16.21■□□□□ 0.19
A1CF-204ENST00000373997 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
A1CF-204ENST00000373997 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
A1CF-204ENST00000373997 RRAGDQ9NQL2 400 aaPredicted RBP16.21■□□□□ 0.19
A1CF-204ENST00000373997 AK9Q5TCS8 1911 aa16.21■□□□□ 0.19
A1CF-204ENST00000373997 LRRCC1Q9C099 1032 aa16.21■□□□□ 0.18
A1CF-204ENST00000373997 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.18
A1CF-204ENST00000373997 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms