RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 TTC22Q5TAA0 569 aa27.71■■■□□ 2.03
RAPGEF1-203ENST00000372195 LUZP1Q86V48 1076 aa27.71■■■□□ 2.03
RAPGEF1-203ENST00000372195 GTF2F1P35269 517 aaKnown RBP eCLIP27.71■■■□□ 2.03
RAPGEF1-203ENST00000372195 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
RAPGEF1-203ENST00000372195 SLC5A1P13866 664 aa27.71■■■□□ 2.03
RAPGEF1-203ENST00000372195 SPTY2D1Q68D10 685 aaPredicted RBP27.71■■■□□ 2.03
RAPGEF1-203ENST00000372195 USP16Q9Y5T5 823 aa27.7■■■□□ 2.03
RAPGEF1-203ENST00000372195 ZPR1O75312 459 aa27.7■■■□□ 2.03
RAPGEF1-203ENST00000372195 HMGB1P09429 215 aaKnown RBP27.7■■■□□ 2.03
RAPGEF1-203ENST00000372195 FBXO31Q5XUX0 539 aaPredicted RBP27.7■■■□□ 2.02
RAPGEF1-203ENST00000372195 SHTN1A0MZ66 631 aa27.7■■■□□ 2.02
RAPGEF1-203ENST00000372195 PPP1R42Q7Z4L9 355 aa27.7■■■□□ 2.02
RAPGEF1-203ENST00000372195 STX1AQ16623 288 aa27.69■■■□□ 2.02
RAPGEF1-203ENST00000372195 MICU3Q86XE3 530 aa27.69■■■□□ 2.02
RAPGEF1-203ENST00000372195 PPP1R12BO60237 982 aaPredicted RBP27.69■■■□□ 2.02
RAPGEF1-203ENST00000372195 SF3B2Q13435 895 aaKnown RBP27.69■■■□□ 2.02
RAPGEF1-203ENST00000372195 TCEANC2Q96MN5 208 aa27.69■■■□□ 2.02
RAPGEF1-203ENST00000372195 MACROD2A1Z1Q3 448 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 IFFO1Q0D2I5 559 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 CNPY2Q9Y2B0 182 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 FAM135AQ9P2D6 1515 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 GOLGA6L10A0A0M3HER8 536 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 TMEM67Q5HYA8 995 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 RNF187Q5TA31 235 aaPredicted RBP27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 ANKRD18BA2A2Z9 1011 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
RAPGEF1-203ENST00000372195 CCDC196A0A1B0GTZ2 297 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 HCLS1P14317 486 aaPredicted RBP27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 IQCA1Q86XH1 822 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 TBC1D32Q96NH3 1257 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 GBP3Q9H0R5 595 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 ABCC5O15440 1437 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 FOXO3O43524 673 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 MTIF2P46199 727 aaKnown RBP27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 SLC26A6Q9BXS9 759 aa27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 KIF2AO00139 706 aaPredicted RBP27.67■■■□□ 2.02
RAPGEF1-203ENST00000372195 PTPRCP08575 1304 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 CCDC194A0A1B0GVG4 234 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 PDIA4P13667 645 aaKnown RBP27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 CCDC141Q6ZP82 1450 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 HYPKQ9NX55 129 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 USP8P40818 1118 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 TICAM2Q86XR7 235 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 ECHDC1Q9NTX5 307 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 ADAMTS2O95450 1211 aa27.66■■■□□ 2.02
RAPGEF1-203ENST00000372195 CTAGE5O15320 804 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 YEATS4O95619 227 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 EZRP15311 586 aaKnown RBP27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 CATIPQ7Z7H3 387 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 GIMAP7Q8NHV1 300 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 NEK1Q96PY6 1258 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 DDX19AQ9NUU7 478 aaKnown RBP27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 PI4KAP2A4QPH2 592 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 PI4KAP1Q8N8J0 262 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 ZNF652Q9Y2D9 606 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 SNW1Q13573 536 aaKnown RBP27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 DBF4Q9UBU7 674 aaPredicted RBP27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 IFT140Q96RY7 1462 aa27.65■■■□□ 2.02
RAPGEF1-203ENST00000372195 C16orf71Q8IYS4 520 aaPredicted RBP27.64■■■□□ 2.02
RAPGEF1-203ENST00000372195 SCLT1Q96NL6 688 aa27.64■■■□□ 2.02
RAPGEF1-203ENST00000372195 TMX3Q96JJ7 454 aa27.64■■■□□ 2.02
RAPGEF1-203ENST00000372195 MMRN2Q9H8L6 949 aa27.64■■■□□ 2.01
RAPGEF1-203ENST00000372195 CEP135Q66GS9 1140 aa27.64■■■□□ 2.01
RAPGEF1-203ENST00000372195 ZNF287Q9HBT7 754 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 UBE4AQ14139 1066 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 BMP2KLQ5H9B9 411 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 MAP9Q49MG5 647 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 GSTTP1A0A1W2PQM5 241 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 WASLO00401 505 aaPredicted RBP27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 AMOTQ4VCS5 1084 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 TMOD2Q9NZR1 351 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 ORC3Q9UBD5 711 aaPredicted RBP27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 SDSP20132 328 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 ZNF165P49910 485 aa27.63■■■□□ 2.01
RAPGEF1-203ENST00000372195 POTEJP0CG39 1038 aa27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 DDX46Q7L014 1031 aaKnown RBP27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 UBE3BQ7Z3V4 1068 aa27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 TMCO5BA8MYB1 307 aa27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 METAP2P50579 478 aaKnown RBP eCLIP27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 TNIP1Q15025 636 aa27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 TMEM266Q2M3C6 531 aa27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 PRPF4BQ13523 1007 aaKnown RBP27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 NCOA1Q15788 1441 aa27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 PHAXQ9H814 394 aaKnown RBP27.62■■■□□ 2.01
RAPGEF1-203ENST00000372195 IARSP41252 1262 aaKnown RBP27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 RNF216Q9NWF9 866 aaPredicted RBP27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 NUCB1Q02818 461 aa27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 TNNQ9UQP3 1299 aa27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 USO1O60763 962 aaKnown RBP27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 HLTFQ14527 1009 aaKnown RBP eCLIP27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 TCERG1LQ5VWI1 586 aa27.61■■■□□ 2.01
RAPGEF1-203ENST00000372195 IDEP14735 1019 aa27.6■■■□□ 2.01
RAPGEF1-203ENST00000372195 AMOTL2Q9Y2J4 779 aa27.6■■■□□ 2.01
RAPGEF1-203ENST00000372195 NOS1P29475 1434 aa27.6■■■□□ 2.01
RAPGEF1-203ENST00000372195 DESP17661 470 aa27.6■■■□□ 2.01
RAPGEF1-203ENST00000372195 MEIS3Q99687 375 aa27.6■■■□□ 2.01
RAPGEF1-203ENST00000372195 UBE2HP62256 183 aa27.59■■■□□ 2.01
RAPGEF1-203ENST00000372195 PCDHB15Q9Y5E8 787 aa27.59■■■□□ 2.01
RAPGEF1-203ENST00000372195 USP48Q86UV5 1035 aa27.59■■■□□ 2.01
RAPGEF1-203ENST00000372195 ANO6Q4KMQ2 910 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms