RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 NALCNQ8IZF0 1738 aa20.64■□□□□ 0.89
VEGFA-205ENST00000372067 ZGPATQ8N5A5 531 aaKnown RBP20.64■□□□□ 0.89
VEGFA-205ENST00000372067 CEMIPQ8WUJ3 1361 aa20.63■□□□□ 0.89
VEGFA-205ENST00000372067 PHKG2P15735 406 aa20.63■□□□□ 0.89
VEGFA-205ENST00000372067 FAM13BQ9NYF5 915 aa20.63■□□□□ 0.89
VEGFA-205ENST00000372067 USP16Q9Y5T5 823 aa20.63■□□□□ 0.89
VEGFA-205ENST00000372067 LINS1Q8NG48 757 aa20.62■□□□□ 0.89
VEGFA-205ENST00000372067 ALDH1L1O75891 902 aa20.62■□□□□ 0.89
VEGFA-205ENST00000372067 NUCB2P80303 420 aa20.62■□□□□ 0.89
VEGFA-205ENST00000372067 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
VEGFA-205ENST00000372067 BICC1Q9H694 974 aaKnown RBP20.62■□□□□ 0.89
VEGFA-205ENST00000372067 SUCLG2Q96I99 432 aa20.61■□□□□ 0.89
VEGFA-205ENST00000372067 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-205ENST00000372067 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
VEGFA-205ENST00000372067 UBE3BQ7Z3V4 1068 aa20.61■□□□□ 0.89
VEGFA-205ENST00000372067 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 OSBPL3Q9H4L5 887 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 PXDNQ92626 1479 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 VGLL3A8MV65 326 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 PALD1Q9ULE6 856 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 GLRX3O76003 335 aaKnown RBP20.6■□□□□ 0.89
VEGFA-205ENST00000372067 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
VEGFA-205ENST00000372067 RGPD1P0DJD0 1748 aa20.59■□□□□ 0.89
VEGFA-205ENST00000372067 RAB3GAP1Q15042 981 aa20.59■□□□□ 0.89
VEGFA-205ENST00000372067 RUFY2Q8WXA3 655 aa20.59■□□□□ 0.89
VEGFA-205ENST00000372067 PLCD3Q8N3E9 789 aa20.59■□□□□ 0.89
VEGFA-205ENST00000372067 FSD1Q9BTV5 496 aa20.59■□□□□ 0.89
VEGFA-205ENST00000372067 SYTL4Q96C24 671 aaPredicted RBP20.58■□□□□ 0.89
VEGFA-205ENST00000372067 ADCY9O60503 1353 aa20.58■□□□□ 0.89
VEGFA-205ENST00000372067 DCAF5Q96JK2 942 aa20.58■□□□□ 0.88
VEGFA-205ENST00000372067 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.88
VEGFA-205ENST00000372067 A0A087WZG4 1122 aa20.57■□□□□ 0.88
VEGFA-205ENST00000372067 DMTNQ08495 405 aa20.57■□□□□ 0.88
VEGFA-205ENST00000372067 NEUROD6Q96NK8 337 aa20.57■□□□□ 0.88
VEGFA-205ENST00000372067 ZBTB3Q9H5J0 574 aa20.57■□□□□ 0.88
VEGFA-205ENST00000372067 PRPF40AO75400 957 aaKnown RBP20.56■□□□□ 0.88
VEGFA-205ENST00000372067 ZSCAN20P17040 1043 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-205ENST00000372067 ZCRB1Q8TBF4 217 aaKnown RBP20.56■□□□□ 0.88
VEGFA-205ENST00000372067 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
VEGFA-205ENST00000372067 KAT6BQ8WYB5 2073 aa20.56■□□□□ 0.88
VEGFA-205ENST00000372067 CYP27B1O15528 508 aa20.56■□□□□ 0.88
VEGFA-205ENST00000372067 PKP1Q13835 747 aa20.56■□□□□ 0.88
VEGFA-205ENST00000372067 ANP32BQ92688 251 aaKnown RBP20.56■□□□□ 0.88
VEGFA-205ENST00000372067 NWD1Q149M9 1564 aa20.56■□□□□ 0.88
VEGFA-205ENST00000372067 DNAJC2Q99543 621 aaKnown RBP20.55■□□□□ 0.88
VEGFA-205ENST00000372067 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
VEGFA-205ENST00000372067 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
VEGFA-205ENST00000372067 POLA2Q14181 598 aa20.55■□□□□ 0.88
VEGFA-205ENST00000372067 SKOR2Q2VWA4 1001 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-205ENST00000372067 CCDC85AQ96PX6 553 aaPredicted RBP20.55■□□□□ 0.88
VEGFA-205ENST00000372067 LTN1O94822 1766 aa20.54■□□□□ 0.88
VEGFA-205ENST00000372067 DTNBO60941 627 aa20.54■□□□□ 0.88
VEGFA-205ENST00000372067 STAP2Q9UGK3 403 aa20.54■□□□□ 0.88
VEGFA-205ENST00000372067 PTMSP20962 102 aa20.53■□□□□ 0.88
VEGFA-205ENST00000372067 MRE11P49959 708 aa20.53■□□□□ 0.88
VEGFA-205ENST00000372067 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
VEGFA-205ENST00000372067 NFAT5O94916 1531 aa20.53■□□□□ 0.88
VEGFA-205ENST00000372067 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
VEGFA-205ENST00000372067 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
VEGFA-205ENST00000372067 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
VEGFA-205ENST00000372067 CAVIN1Q6NZI2 390 aaKnown RBP20.53■□□□□ 0.88
VEGFA-205ENST00000372067 CHAMP1Q96JM3 812 aa20.53■□□□□ 0.88
VEGFA-205ENST00000372067 CPA1P15085 419 aa20.52■□□□□ 0.88
VEGFA-205ENST00000372067 SLAIN2Q9P270 581 aa20.52■□□□□ 0.88
VEGFA-205ENST00000372067 UTP14CQ5TAP6 766 aaKnown RBP20.52■□□□□ 0.87
VEGFA-205ENST00000372067 MCM2P49736 904 aa20.51■□□□□ 0.87
VEGFA-205ENST00000372067 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
VEGFA-205ENST00000372067 GCKRQ14397 625 aa20.51■□□□□ 0.87
VEGFA-205ENST00000372067 NEURL1BA8MQ27 555 aa20.5■□□□□ 0.87
VEGFA-205ENST00000372067 A1BGP04217 495 aa20.5■□□□□ 0.87
VEGFA-205ENST00000372067 ZKSCAN1P17029 563 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-205ENST00000372067 CASTP20810 708 aaKnown RBP20.5■□□□□ 0.87
VEGFA-205ENST00000372067 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
VEGFA-205ENST00000372067 TRIM44Q96DX7 344 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-205ENST00000372067 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-205ENST00000372067 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
VEGFA-205ENST00000372067 IGKV5-2P06315 115 aa20.5■□□□□ 0.87
VEGFA-205ENST00000372067 ZNF335Q9H4Z2 1342 aaPredicted RBP20.5■□□□□ 0.87
VEGFA-205ENST00000372067 PI4K2BQ8TCG2 481 aa20.49■□□□□ 0.87
VEGFA-205ENST00000372067 GORABQ5T7V8 394 aa20.49■□□□□ 0.87
VEGFA-205ENST00000372067 IL25Q9H293 177 aa20.49■□□□□ 0.87
VEGFA-205ENST00000372067 EAF2Q96CJ1 260 aaPredicted RBP20.49■□□□□ 0.87
VEGFA-205ENST00000372067 NDUFB9Q9Y6M9 179 aa20.49■□□□□ 0.87
VEGFA-205ENST00000372067 OFD1O75665 1012 aa20.48■□□□□ 0.87
VEGFA-205ENST00000372067 NCAPD2Q15021 1401 aa20.48■□□□□ 0.87
VEGFA-205ENST00000372067 LMBR1LQ6UX01 489 aa20.48■□□□□ 0.87
VEGFA-205ENST00000372067 SGSM2O43147 1006 aa20.48■□□□□ 0.87
VEGFA-205ENST00000372067 TLR7Q9NYK1 1049 aaKnown RBP20.48■□□□□ 0.87
VEGFA-205ENST00000372067 AOX1Q06278 1338 aa20.47■□□□□ 0.87
VEGFA-205ENST00000372067 TTC41PQ6P2S7 1318 aa20.47■□□□□ 0.87
VEGFA-205ENST00000372067 IL2RBP14784 551 aa20.47■□□□□ 0.87
VEGFA-205ENST00000372067 EPHA10Q5JZY3 1008 aa20.47■□□□□ 0.87
VEGFA-205ENST00000372067 EDC3Q96F86 508 aaKnown RBP20.47■□□□□ 0.87
VEGFA-205ENST00000372067 EVI5LQ96CN4 794 aa20.46■□□□□ 0.87
VEGFA-205ENST00000372067 MAP7D2Q96T17 732 aa20.46■□□□□ 0.87
VEGFA-205ENST00000372067 SMC3Q9UQE7 1217 aa20.46■□□□□ 0.87
VEGFA-205ENST00000372067 MST1RQ04912 1400 aa20.46■□□□□ 0.87
VEGFA-205ENST00000372067 SALL3Q9BXA9 1300 aa20.46■□□□□ 0.87
VEGFA-205ENST00000372067 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms