RNA–Protein interactions for RNA: ENST00000370664.3

UBTD1-201, Transcript of ubiquitin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBTD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTD1-201ENST00000370664 ARFGEF2Q9Y6D5 1785 aa29.22■■■□□ 2.27
UBTD1-201ENST00000370664 GCKRQ14397 625 aa29.2■■■□□ 2.27
UBTD1-201ENST00000370664 BMP2KLQ5H9B9 411 aa29.2■■■□□ 2.27
UBTD1-201ENST00000370664 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.2■■■□□ 2.27
UBTD1-201ENST00000370664 SRGAP3O43295 1099 aa29.2■■■□□ 2.26
UBTD1-201ENST00000370664 SMARCA5O60264 1052 aaPredicted RBP29.2■■■□□ 2.26
UBTD1-201ENST00000370664 MTX1Q13505 466 aa29.2■■■□□ 2.26
UBTD1-201ENST00000370664 PLEKHM2Q8IWE5 1019 aa29.2■■■□□ 2.26
UBTD1-201ENST00000370664 KAT6BQ8WYB5 2073 aa29.19■■■□□ 2.26
UBTD1-201ENST00000370664 TTLL7Q6ZT98 887 aa29.19■■■□□ 2.26
UBTD1-201ENST00000370664 MEX3CQ5U5Q3 659 aaKnown RBP29.18■■■□□ 2.26
UBTD1-201ENST00000370664 C16orf71Q8IYS4 520 aaPredicted RBP29.18■■■□□ 2.26
UBTD1-201ENST00000370664 LRRCC1Q9C099 1032 aa29.18■■■□□ 2.26
UBTD1-201ENST00000370664 ACSBG1Q96GR2 724 aa29.17■■■□□ 2.26
UBTD1-201ENST00000370664 SUCLG2Q96I99 432 aa29.16■■■□□ 2.26
UBTD1-201ENST00000370664 SLC4A9Q96Q91 983 aa29.16■■■□□ 2.26
UBTD1-201ENST00000370664 RAB11FIP3O75154 756 aa29.15■■■□□ 2.26
UBTD1-201ENST00000370664 NUP188Q5SRE5 1749 aa29.15■■■□□ 2.26
UBTD1-201ENST00000370664 A0A0G2JS52 829 aa29.14■■■□□ 2.26
UBTD1-201ENST00000370664 BCL11AQ9H165 835 aa29.14■■■□□ 2.26
UBTD1-201ENST00000370664 SURF6O75683 361 aaKnown RBP29.14■■■□□ 2.25
UBTD1-201ENST00000370664 CYP19A1P11511 503 aaPredicted RBP29.14■■■□□ 2.25
UBTD1-201ENST00000370664 AFDNP55196 1824 aaKnown RBP29.13■■■□□ 2.25
UBTD1-201ENST00000370664 ATP5J2-PTCD1G3V325 749 aa29.13■■■□□ 2.25
UBTD1-201ENST00000370664 SEC24BO95487 1268 aa29.13■■■□□ 2.25
UBTD1-201ENST00000370664 OTUD7AQ8TE49 926 aaPredicted RBP29.12■■■□□ 2.25
UBTD1-201ENST00000370664 KAZALD1Q96I82 304 aa29.12■■■□□ 2.25
UBTD1-201ENST00000370664 HSP90AB4PQ58FF6 505 aa29.11■■■□□ 2.25
UBTD1-201ENST00000370664 ZBTB3Q9H5J0 574 aa29.11■■■□□ 2.25
UBTD1-201ENST00000370664 BICC1Q9H694 974 aaKnown RBP29.11■■■□□ 2.25
UBTD1-201ENST00000370664 MYT1Q01538 1121 aa29.1■■■□□ 2.25
UBTD1-201ENST00000370664 TTC22Q5TAA0 569 aa29.1■■■□□ 2.25
UBTD1-201ENST00000370664 TJP1Q07157 1748 aa29.1■■■□□ 2.25
UBTD1-201ENST00000370664 NOP58Q9Y2X3 529 aaKnown RBP29.09■■■□□ 2.25
UBTD1-201ENST00000370664 ZNF330Q9Y3S2 320 aaPredicted RBP29.09■■■□□ 2.25
UBTD1-201ENST00000370664 A0A087WZG4 1122 aa29.08■■■□□ 2.25
UBTD1-201ENST00000370664 KIF6Q6ZMV9 814 aa29.08■■■□□ 2.25
UBTD1-201ENST00000370664 IPO9Q96P70 1041 aaKnown RBP29.08■■■□□ 2.25
UBTD1-201ENST00000370664 UPF2Q9HAU5 1272 aaKnown RBP29.08■■■□□ 2.25
UBTD1-201ENST00000370664 COL15A1P39059 1388 aa29.08■■■□□ 2.25
UBTD1-201ENST00000370664 AFF2P51816 1311 aa29.08■■■□□ 2.25
UBTD1-201ENST00000370664 THSD7AQ9UPZ6 1657 aa29.07■■■□□ 2.24
UBTD1-201ENST00000370664 GSPT1P15170 499 aaKnown RBP29.07■■■□□ 2.24
UBTD1-201ENST00000370664 UBE3BQ7Z3V4 1068 aa29.07■■■□□ 2.24
UBTD1-201ENST00000370664 KIF1BPQ96EK5 621 aa29.07■■■□□ 2.24
UBTD1-201ENST00000370664 OSBPL3Q9H4L5 887 aa29.07■■■□□ 2.24
UBTD1-201ENST00000370664 CWC25Q9NXE8 425 aaPredicted RBP29.07■■■□□ 2.24
UBTD1-201ENST00000370664 SMARCC1Q92922 1105 aaPredicted RBP29.06■■■□□ 2.24
UBTD1-201ENST00000370664 CCDC191Q8NCU4 936 aa29.06■■■□□ 2.24
UBTD1-201ENST00000370664 RHPN1Q8TCX5 695 aa29.06■■■□□ 2.24
UBTD1-201ENST00000370664 PDE1AP54750 535 aa29.05■■■□□ 2.24
UBTD1-201ENST00000370664 GJD4Q96KN9 370 aaPredicted RBP29.05■■■□□ 2.24
UBTD1-201ENST00000370664 H7C1W4 665 aa29.04■■■□□ 2.24
UBTD1-201ENST00000370664 KCNQ2O43526 872 aa29.04■■■□□ 2.24
UBTD1-201ENST00000370664 CASP7P55210 303 aa29.04■■■□□ 2.24
UBTD1-201ENST00000370664 ZBTB1Q9Y2K1 713 aa29.04■■■□□ 2.24
UBTD1-201ENST00000370664 SALL3Q9BXA9 1300 aa29.04■■■□□ 2.24
UBTD1-201ENST00000370664 LOC102724428A0A0B4J2F2 783 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 SIK1P57059 783 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 TCIRG1Q13488 830 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 JARID2Q92833 1246 aaPredicted RBP29.03■■■□□ 2.24
UBTD1-201ENST00000370664 PALLDQ8WX93 1383 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 ATP6V1AP38606 617 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 OS9Q13438 667 aaPredicted RBP29.03■■■□□ 2.24
UBTD1-201ENST00000370664 EPHA10Q5JZY3 1008 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 MAP3K15Q6ZN16 1313 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 ISCA1Q9BUE6 129 aa29.03■■■□□ 2.24
UBTD1-201ENST00000370664 IL6STP40189 918 aaPredicted RBP29.02■■■□□ 2.24
UBTD1-201ENST00000370664 IL1RAPL2Q9NP60 686 aa29.02■■■□□ 2.24
UBTD1-201ENST00000370664 MX1P20591 662 aa29.01■■■□□ 2.23
UBTD1-201ENST00000370664 ERC1Q8IUD2 1116 aa29.01■■■□□ 2.23
UBTD1-201ENST00000370664 CICQ96RK0 1608 aaPredicted RBP29.01■■■□□ 2.23
UBTD1-201ENST00000370664 ATRNO75882 1429 aa29.01■■■□□ 2.23
UBTD1-201ENST00000370664 DDRGK1Q96HY6 314 aa29■■■□□ 2.23
UBTD1-201ENST00000370664 ARXQ96QS3 562 aa29■■■□□ 2.23
UBTD1-201ENST00000370664 STAP2Q9UGK3 403 aa29■■■□□ 2.23
UBTD1-201ENST00000370664 TRPC5Q9UL62 973 aaPredicted RBP29■■■□□ 2.23
UBTD1-201ENST00000370664 PA2G4Q9UQ80 394 aaKnown RBP29■■■□□ 2.23
UBTD1-201ENST00000370664 MSH5O43196 834 aa29■■■□□ 2.23
UBTD1-201ENST00000370664 CDC45O75419 566 aa29■■■□□ 2.23
UBTD1-201ENST00000370664 TRIM28Q13263 835 aaKnown RBP29■■■□□ 2.23
UBTD1-201ENST00000370664 RABL6Q3YEC7 729 aaPredicted RBP29■■■□□ 2.23
UBTD1-201ENST00000370664 CCDC87Q9NVE4 849 aa28.99■■■□□ 2.23
UBTD1-201ENST00000370664 MFAP1P55081 439 aaKnown RBP28.98■■■□□ 2.23
UBTD1-201ENST00000370664 GIGYF2Q6Y7W6 1299 aaKnown RBP28.98■■■□□ 2.23
UBTD1-201ENST00000370664 TBC1D9Q6ZT07 1266 aa28.97■■■□□ 2.23
UBTD1-201ENST00000370664 AOX1Q06278 1338 aa28.97■■■□□ 2.23
UBTD1-201ENST00000370664 G3BP1Q13283 466 aaKnown RBP eCLIP28.97■■■□□ 2.23
UBTD1-201ENST00000370664 HSP90AB3PQ58FF7 597 aa28.97■■■□□ 2.23
UBTD1-201ENST00000370664 INTS5Q6P9B9 1019 aaKnown RBP28.97■■■□□ 2.23
UBTD1-201ENST00000370664 TBC1D32Q96NH3 1257 aa28.97■■■□□ 2.23
UBTD1-201ENST00000370664 SDSP20132 328 aa28.96■■■□□ 2.23
UBTD1-201ENST00000370664 CRKLP46109 303 aaKnown RBP28.96■■■□□ 2.23
UBTD1-201ENST00000370664 ITPK1Q13572 414 aa28.96■■■□□ 2.23
UBTD1-201ENST00000370664 ONECUT3O60422 494 aaPredicted RBP28.95■■■□□ 2.23
UBTD1-201ENST00000370664 ERVV-1B6SEH8 477 aa28.94■■■□□ 2.22
UBTD1-201ENST00000370664 EIF5P55010 431 aaKnown RBP28.94■■■□□ 2.22
UBTD1-201ENST00000370664 FOXO4P98177 505 aa28.94■■■□□ 2.22
UBTD1-201ENST00000370664 DZIP3Q86Y13 1208 aaKnown RBP28.94■■■□□ 2.22
UBTD1-201ENST00000370664 NUTM1Q86Y26 1132 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms