RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 GJB2P29033 226 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 NUCB1Q02818 461 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 KIAA1328Q86T90 577 aa22.86■■□□□ 1.25
LMO4-202ENST00000370544 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
LMO4-202ENST00000370544 IQCEQ6IPM2 695 aa22.86■■□□□ 1.25
LMO4-202ENST00000370544 KRI1Q8N9T8 703 aaKnown RBP22.86■■□□□ 1.25
LMO4-202ENST00000370544 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
LMO4-202ENST00000370544 MSH6P52701 1360 aa22.86■■□□□ 1.25
LMO4-202ENST00000370544 ZNF397Q8NF99 534 aaPredicted RBP22.86■■□□□ 1.25
LMO4-202ENST00000370544 RHPN1Q8TCX5 695 aa22.86■■□□□ 1.25
LMO4-202ENST00000370544 JARID2Q92833 1246 aaPredicted RBP22.86■■□□□ 1.25
LMO4-202ENST00000370544 PAF1Q8N7H5 531 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 ARHGAP29Q52LW3 1261 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 CTTNBP2Q8WZ74 1663 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 UQCRHLA0A096LP55 91 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 H0YHG0 523 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 UQCRHP07919 91 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 NLRP5P59047 1200 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 MEIS3Q99687 375 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 HMG20BQ9P0W2 317 aa22.85■■□□□ 1.25
LMO4-202ENST00000370544 PPP1R12BO60237 982 aaPredicted RBP22.84■■□□□ 1.25
LMO4-202ENST00000370544 EIF2AK4Q9P2K8 1649 aaKnown RBP22.84■■□□□ 1.25
LMO4-202ENST00000370544 KLHL10Q6JEL2 608 aa22.84■■□□□ 1.25
LMO4-202ENST00000370544 CCDC194A0A1B0GVG4 234 aa22.84■■□□□ 1.25
LMO4-202ENST00000370544 CTAGE5O15320 804 aa22.84■■□□□ 1.25
LMO4-202ENST00000370544 NEK1Q96PY6 1258 aa22.84■■□□□ 1.25
LMO4-202ENST00000370544 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.25
LMO4-202ENST00000370544 SFPQP23246 707 aaKnown RBP eCLIP22.83■■□□□ 1.25
LMO4-202ENST00000370544 LEKR1Q6ZMV7 388 aa22.83■■□□□ 1.25
LMO4-202ENST00000370544 RAB34Q9BZG1 259 aa22.83■■□□□ 1.25
LMO4-202ENST00000370544 C6orf229H3BNL8 230 aa22.83■■□□□ 1.25
LMO4-202ENST00000370544 TRAPPC8Q9Y2L5 1435 aa22.83■■□□□ 1.25
LMO4-202ENST00000370544 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.24
LMO4-202ENST00000370544 TMEM67Q5HYA8 995 aa22.83■■□□□ 1.24
LMO4-202ENST00000370544 ZCRB1Q8TBF4 217 aaKnown RBP22.83■■□□□ 1.24
LMO4-202ENST00000370544 UNC13AQ9UPW8 1703 aa22.83■■□□□ 1.24
LMO4-202ENST00000370544 STX6O43752 255 aa22.83■■□□□ 1.24
LMO4-202ENST00000370544 TMEM266Q2M3C6 531 aa22.83■■□□□ 1.24
LMO4-202ENST00000370544 MRPL50Q8N5N7 158 aaKnown RBP22.83■■□□□ 1.24
LMO4-202ENST00000370544 TSG101Q99816 390 aa22.83■■□□□ 1.24
LMO4-202ENST00000370544 USP16Q9Y5T5 823 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 PARD3Q8TEW0 1356 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 HAND2P61296 217 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 TBC1D32Q96NH3 1257 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 ZSCAN30Q86W11 494 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
LMO4-202ENST00000370544 NCOA7Q8NI08 942 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 CUL5Q93034 780 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 LDHCP07864 332 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 FSIP1Q8NA03 581 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 UQCRFS1P1P0C7P4 283 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 IARSP41252 1262 aaKnown RBP22.81■■□□□ 1.24
LMO4-202ENST00000370544 FKBP15Q5T1M5 1219 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 CNNM3Q8NE01 707 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 TAF4BQ92750 862 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
LMO4-202ENST00000370544 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
LMO4-202ENST00000370544 C8orf58Q8NAV2 365 aa22.8■■□□□ 1.24
LMO4-202ENST00000370544 DDX19AQ9NUU7 478 aaKnown RBP22.8■■□□□ 1.24
LMO4-202ENST00000370544 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
LMO4-202ENST00000370544 MFSD6Q6ZSS7 791 aa22.8■■□□□ 1.24
LMO4-202ENST00000370544 NPHP3Q7Z494 1330 aa22.8■■□□□ 1.24
LMO4-202ENST00000370544 EIF3JO75822 258 aaKnown RBP22.8■■□□□ 1.24
LMO4-202ENST00000370544 CCDC144CPQ8IYA2 1237 aa22.8■■□□□ 1.24
LMO4-202ENST00000370544 CKAP2LQ8IYA6 745 aa22.8■■□□□ 1.24
LMO4-202ENST00000370544 ZNF219Q9P2Y4 722 aaPredicted RBP22.8■■□□□ 1.24
LMO4-202ENST00000370544 CCDC152Q4G0S7 254 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 NEFHP12036 1026 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 SDSP20132 328 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 PDE4BQ07343 736 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 BAG3O95817 575 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 COPS6Q7L5N1 327 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 POLKQ9UBT6 870 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 ALDH1L1O75891 902 aa22.79■■□□□ 1.24
LMO4-202ENST00000370544 SPTY2D1Q68D10 685 aaPredicted RBP22.79■■□□□ 1.24
LMO4-202ENST00000370544 CCDC66A2RUB6 948 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 KIF5BP33176 963 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 METAP2P50579 478 aaKnown RBP eCLIP22.78■■□□□ 1.24
LMO4-202ENST00000370544 SLC39A6Q13433 755 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 ZRANB1Q9UGI0 708 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 ANKRD44Q8N8A2 993 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 GDPD2Q9HCC8 539 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 RFC4P35249 363 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 MICU3Q86XE3 530 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 CCDC148Q8NFR7 591 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 PCDHB15Q9Y5E8 787 aa22.78■■□□□ 1.24
LMO4-202ENST00000370544 TOP1P11387 765 aaKnown RBP22.77■■□□□ 1.24
LMO4-202ENST00000370544 SPA17Q15506 151 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 TSPY2A6NKD2 308 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 ZSCAN12O43309 604 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 TFIP11Q9UBB9 837 aaKnown RBP22.77■■□□□ 1.24
LMO4-202ENST00000370544 ORC3Q9UBD5 711 aaPredicted RBP22.77■■□□□ 1.24
LMO4-202ENST00000370544 CCDC12Q8WUD4 166 aaPredicted RBP22.77■■□□□ 1.24
LMO4-202ENST00000370544 KSR2Q6VAB6 950 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 TSPYL1Q9H0U9 437 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 KAT14Q9H8E8 782 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 CLIP2Q9UDT6 1046 aa22.77■■□□□ 1.24
LMO4-202ENST00000370544 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
LMO4-202ENST00000370544 UBA5Q9GZZ9 404 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms