RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 RIPK4P57078 832 aa28.46■■■□□ 2.15
RTCA-202ENST00000370126 NBPF5PQ86XG9 351 aaPredicted RBP28.45■■■□□ 2.14
RTCA-202ENST00000370126 ARFGEF2Q9Y6D5 1785 aa28.45■■■□□ 2.14
RTCA-202ENST00000370126 PRELPP51888 382 aa28.44■■■□□ 2.14
RTCA-202ENST00000370126 CACNA1SQ13698 1873 aa28.44■■■□□ 2.14
RTCA-202ENST00000370126 CCDC88AQ3V6T2 1871 aa28.44■■■□□ 2.14
RTCA-202ENST00000370126 LMNB1P20700 586 aa28.43■■■□□ 2.14
RTCA-202ENST00000370126 TMPOP42166 694 aaKnown RBP28.43■■■□□ 2.14
RTCA-202ENST00000370126 NIP7Q9Y221 180 aaKnown RBP eCLIP28.43■■■□□ 2.14
RTCA-202ENST00000370126 TIAM2Q8IVF5 1701 aa28.43■■■□□ 2.14
RTCA-202ENST00000370126 ZC3H4Q9UPT8 1303 aaKnown RBP28.43■■■□□ 2.14
RTCA-202ENST00000370126 FER1L6Q2WGJ9 1857 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 NFKBIEO00221 500 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 SRGNP10124 158 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 HSPA6P17066 643 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 HLFQ16534 295 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 TSPYL4Q9UJ04 414 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 KDM2BQ8NHM5 1336 aa28.42■■■□□ 2.14
RTCA-202ENST00000370126 TNRC6CQ9HCJ0 1690 aaKnown RBP28.42■■■□□ 2.14
RTCA-202ENST00000370126 NUP98P52948 1817 aa28.41■■■□□ 2.14
RTCA-202ENST00000370126 SLX4Q8IY92 1834 aa28.41■■■□□ 2.14
RTCA-202ENST00000370126 LMOD3Q0VAK6 560 aa28.41■■■□□ 2.14
RTCA-202ENST00000370126 STYK1Q6J9G0 422 aa28.41■■■□□ 2.14
RTCA-202ENST00000370126 TOMM70O94826 608 aa28.4■■■□□ 2.14
RTCA-202ENST00000370126 CNKSR1Q969H4 720 aa28.4■■■□□ 2.14
RTCA-202ENST00000370126 RRP7AQ9Y3A4 280 aaKnown RBP28.4■■■□□ 2.14
RTCA-202ENST00000370126 C21orf2O43822 256 aa28.39■■■□□ 2.14
RTCA-202ENST00000370126 TPTE2Q6XPS3 522 aa28.39■■■□□ 2.14
RTCA-202ENST00000370126 CCDC146Q8IYE0 955 aa28.39■■■□□ 2.14
RTCA-202ENST00000370126 NGEFQ8N5V2 710 aa28.39■■■□□ 2.14
RTCA-202ENST00000370126 MASTLQ96GX5 879 aa28.39■■■□□ 2.14
RTCA-202ENST00000370126 ERVV-1B6SEH8 477 aa28.38■■■□□ 2.13
RTCA-202ENST00000370126 BABAM1Q9NWV8 329 aa28.38■■■□□ 2.13
RTCA-202ENST00000370126 ZNF219Q9P2Y4 722 aaPredicted RBP28.38■■■□□ 2.13
RTCA-202ENST00000370126 ERBB4Q15303 1308 aa28.38■■■□□ 2.13
RTCA-202ENST00000370126 MAP3K15Q6ZN16 1313 aa28.38■■■□□ 2.13
RTCA-202ENST00000370126 WDR43Q15061 677 aaKnown RBP eCLIP28.37■■■□□ 2.13
RTCA-202ENST00000370126 PRPF40BQ6NWY9 871 aaKnown RBP28.37■■■□□ 2.13
RTCA-202ENST00000370126 TTLL7Q6ZT98 887 aa28.37■■■□□ 2.13
RTCA-202ENST00000370126 DICER1Q9UPY3 1922 aaKnown RBP28.36■■■□□ 2.13
RTCA-202ENST00000370126 MYL6BP14649 208 aa28.36■■■□□ 2.13
RTCA-202ENST00000370126 KIF6Q6ZMV9 814 aa28.36■■■□□ 2.13
RTCA-202ENST00000370126 PRKRIP1Q9H875 184 aaPredicted RBP28.36■■■□□ 2.13
RTCA-202ENST00000370126 KLRG2A4D1S0 409 aaPredicted RBP28.35■■■□□ 2.13
RTCA-202ENST00000370126 FAM177BA6PVY3 158 aa28.35■■■□□ 2.13
RTCA-202ENST00000370126 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
RTCA-202ENST00000370126 NEUROD2Q15784 382 aa28.33■■■□□ 2.13
RTCA-202ENST00000370126 RBM46Q8TBY0 533 aaKnown RBP28.33■■■□□ 2.13
RTCA-202ENST00000370126 ADAMTS8Q9UP79 889 aa28.33■■■□□ 2.13
RTCA-202ENST00000370126 LTBP3Q9NS15 1303 aa28.33■■■□□ 2.13
RTCA-202ENST00000370126 NPR1P16066 1061 aa28.32■■■□□ 2.12
RTCA-202ENST00000370126 C16orf71Q8IYS4 520 aaPredicted RBP28.32■■■□□ 2.12
RTCA-202ENST00000370126 RRAGCQ9HB90 399 aa28.32■■■□□ 2.12
RTCA-202ENST00000370126 GLTPD2A6NH11 291 aa28.31■■■□□ 2.12
RTCA-202ENST00000370126 SOGA3Q5TF21 947 aa28.31■■■□□ 2.12
RTCA-202ENST00000370126 TAOK3Q9H2K8 898 aa28.31■■■□□ 2.12
RTCA-202ENST00000370126 ZBTB3Q9H5J0 574 aa28.31■■■□□ 2.12
RTCA-202ENST00000370126 TRIM35Q9UPQ4 493 aa28.31■■■□□ 2.12
RTCA-202ENST00000370126 ABCC12Q96J65 1359 aa28.3■■■□□ 2.12
RTCA-202ENST00000370126 IBTKQ9P2D0 1353 aaPredicted RBP28.3■■■□□ 2.12
RTCA-202ENST00000370126 LRP10Q7Z4F1 713 aa28.3■■■□□ 2.12
RTCA-202ENST00000370126 NYXQ9GZU5 481 aa28.3■■■□□ 2.12
RTCA-202ENST00000370126 EIF2S2P20042 333 aaKnown RBP28.29■■■□□ 2.12
RTCA-202ENST00000370126 GTF2E1P29083 439 aaPredicted RBP28.29■■■□□ 2.12
RTCA-202ENST00000370126 PDIA6Q15084 440 aa28.29■■■□□ 2.12
RTCA-202ENST00000370126 C7orf43Q8WVR3 580 aa28.29■■■□□ 2.12
RTCA-202ENST00000370126 UBN2Q6ZU65 1347 aa28.28■■■□□ 2.12
RTCA-202ENST00000370126 CHL1O00533 1208 aa28.27■■■□□ 2.12
RTCA-202ENST00000370126 NUTM1Q86Y26 1132 aa28.27■■■□□ 2.12
RTCA-202ENST00000370126 RIC1Q4ADV7 1423 aa28.26■■■□□ 2.12
RTCA-202ENST00000370126 GPTP24298 496 aa28.26■■■□□ 2.11
RTCA-202ENST00000370126 PROSER3Q2NL68 480 aa28.26■■■□□ 2.11
RTCA-202ENST00000370126 ERFEQ4G0M1 354 aa28.26■■■□□ 2.11
RTCA-202ENST00000370126 GIGYF2Q6Y7W6 1299 aaKnown RBP28.26■■■□□ 2.11
RTCA-202ENST00000370126 ZNF34Q8IZ26 560 aa28.26■■■□□ 2.11
RTCA-202ENST00000370126 APLP1P51693 650 aa28.25■■■□□ 2.11
RTCA-202ENST00000370126 CCDC93Q567U6 631 aa28.25■■■□□ 2.11
RTCA-202ENST00000370126 WDR90Q96KV7 1748 aa28.25■■■□□ 2.11
RTCA-202ENST00000370126 ANXA1P04083 346 aa28.24■■■□□ 2.11
RTCA-202ENST00000370126 FSTL1Q12841 308 aa28.24■■■□□ 2.11
RTCA-202ENST00000370126 CRY2Q49AN0 593 aa28.24■■■□□ 2.11
RTCA-202ENST00000370126 SUSD4Q5VX71 490 aa28.23■■■□□ 2.11
RTCA-202ENST00000370126 ANKRD36CQ5JPF3 1778 aa28.22■■■□□ 2.11
RTCA-202ENST00000370126 VEGFAP15692 232 aaPredicted RBP28.22■■■□□ 2.11
RTCA-202ENST00000370126 ALDH1B1P30837 517 aa28.22■■■□□ 2.11
RTCA-202ENST00000370126 KRT24Q2M2I5 525 aa28.22■■■□□ 2.11
RTCA-202ENST00000370126 LAS1LQ9Y4W2 734 aaKnown RBP28.22■■■□□ 2.11
RTCA-202ENST00000370126 NTSR2O95665 410 aa28.21■■■□□ 2.11
RTCA-202ENST00000370126 DPY19L2Q6NUT2 758 aa28.21■■■□□ 2.11
RTCA-202ENST00000370126 NECTIN2Q92692 538 aa28.21■■■□□ 2.11
RTCA-202ENST00000370126 OLFM4Q6UX06 510 aa28.2■■■□□ 2.1
RTCA-202ENST00000370126 FKBP4Q02790 459 aaKnown RBP eCLIP28.19■■■□□ 2.1
RTCA-202ENST00000370126 PARP10Q53GL7 1025 aa28.19■■■□□ 2.1
RTCA-202ENST00000370126 COPS6Q7L5N1 327 aa28.18■■■□□ 2.1
RTCA-202ENST00000370126 PPP1R42Q7Z4L9 355 aa28.18■■■□□ 2.1
RTCA-202ENST00000370126 DDX21Q9NR30 783 aaKnown RBP eCLIP28.18■■■□□ 2.1
RTCA-202ENST00000370126 POTECB2RU33 542 aa28.17■■■□□ 2.1
RTCA-202ENST00000370126 HOXA10P31260 410 aaPredicted RBP28.17■■■□□ 2.1
RTCA-202ENST00000370126 RTKN2Q8IZC4 609 aa28.17■■■□□ 2.1
RTCA-202ENST00000370126 SMC1BQ8NDV3 1235 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms