RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 TRIM34Q9BYJ4 488 aa19.14■□□□□ 0.66
CHD1L-203ENST00000369259 CLSTN2Q9H4D0 955 aa19.14■□□□□ 0.66
CHD1L-203ENST00000369259 CFAP65Q6ZU64 1925 aaKnown RBP19.14■□□□□ 0.65
CHD1L-203ENST00000369259 MAP2P11137 1827 aaKnown RBP19.14■□□□□ 0.65
CHD1L-203ENST00000369259 GOLGA6L4A6NEF3 574 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 SKILP12757 684 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 CPA1P15085 419 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 H2AFXP16104 143 aaPredicted RBP19.13■□□□□ 0.65
CHD1L-203ENST00000369259 TAF7LQ5H9L4 462 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 TTC21AQ8NDW8 1320 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 DTNBO60941 627 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 CAVIN2O95810 425 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 VPS53Q5VIR6 699 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 G2E3Q7L622 706 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 PDRG1Q9NUG6 133 aa19.13■□□□□ 0.65
CHD1L-203ENST00000369259 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.13■□□□□ 0.65
CHD1L-203ENST00000369259 FEZ2Q9UHY8 353 aaPredicted RBP19.13■□□□□ 0.65
CHD1L-203ENST00000369259 HTATSF1O43719 755 aaKnown RBP19.12■□□□□ 0.65
CHD1L-203ENST00000369259 ARID5BQ14865 1188 aa19.12■□□□□ 0.65
CHD1L-203ENST00000369259 SARM1Q6SZW1 724 aa19.12■□□□□ 0.65
CHD1L-203ENST00000369259 FHOD1Q9Y613 1164 aa19.12■□□□□ 0.65
CHD1L-203ENST00000369259 KIF2AO00139 706 aaPredicted RBP19.12■□□□□ 0.65
CHD1L-203ENST00000369259 GNAI3P08754 354 aa19.12■□□□□ 0.65
CHD1L-203ENST00000369259 LARP1BQ659C4 914 aaKnown RBP19.12■□□□□ 0.65
CHD1L-203ENST00000369259 MRFAP1L1Q96HT8 127 aa19.12■□□□□ 0.65
CHD1L-203ENST00000369259 TRERF1Q96PN7 1200 aa19.12■□□□□ 0.65
CHD1L-203ENST00000369259 CCAR2Q8N163 923 aaKnown RBP19.11■□□□□ 0.65
CHD1L-203ENST00000369259 SCAND2PQ9GZW5 306 aaPredicted RBP19.11■□□□□ 0.65
CHD1L-203ENST00000369259 KCND1Q9NSA2 647 aa19.11■□□□□ 0.65
CHD1L-203ENST00000369259 NPHP3Q7Z494 1330 aa19.11■□□□□ 0.65
CHD1L-203ENST00000369259 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
CHD1L-203ENST00000369259 ST3GAL1Q11201 340 aa19.11■□□□□ 0.65
CHD1L-203ENST00000369259 GTF3C6Q969F1 213 aa19.11■□□□□ 0.65
CHD1L-203ENST00000369259 NPHP1O15259 732 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 TRMT1Q9NXH9 659 aaKnown RBP19.1■□□□□ 0.65
CHD1L-203ENST00000369259 PIK3C2BO00750 1634 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 GOLGA6L19H0YKK7 550 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 RAD51AP2Q09MP3 1159 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 GGT6Q6P531 493 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 MCM10Q7L590 875 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 FERMT3Q86UX7 667 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 SPATA32Q96LK8 384 aa19.1■□□□□ 0.65
CHD1L-203ENST00000369259 CCDC69A6NI79 296 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 CCZ1BP86790 482 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 CCZ1P86791 482 aaPredicted RBP19.09■□□□□ 0.65
CHD1L-203ENST00000369259 FAM173BQ6P4H8 233 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 CDC37L1Q7L3B6 337 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 AATKQ6ZMQ8 1374 aa19.09■□□□□ 0.65
CHD1L-203ENST00000369259 ME3Q16798 604 aa19.08■□□□□ 0.65
CHD1L-203ENST00000369259 L2HGDHQ9H9P8 463 aa19.08■□□□□ 0.65
CHD1L-203ENST00000369259 IQCB1Q15051 598 aa19.08■□□□□ 0.64
CHD1L-203ENST00000369259 ERCC6LQ2NKX8 1250 aa19.08■□□□□ 0.64
CHD1L-203ENST00000369259 PI4K2BQ8TCG2 481 aa19.08■□□□□ 0.64
CHD1L-203ENST00000369259 JAKMIP1Q96N16 626 aaKnown RBP19.08■□□□□ 0.64
CHD1L-203ENST00000369259 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
CHD1L-203ENST00000369259 CYP46A1Q9Y6A2 500 aa19.08■□□□□ 0.64
CHD1L-203ENST00000369259 KIDINS220Q9ULH0 1771 aa19.08■□□□□ 0.64
CHD1L-203ENST00000369259 NR1I2O75469 434 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 PNMA6AP0CW24 399 aaPredicted RBP19.07■□□□□ 0.64
CHD1L-203ENST00000369259 PDCP20941 246 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 PLA2G4AP47712 749 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 CLCN6P51797 869 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 TEX35Q5T0J7 233 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 CNTROBQ8N137 903 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 TM6SF1Q9BZW5 370 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 ZSWIM6Q9HCJ5 1215 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 SPG7Q9UQ90 795 aa19.07■□□□□ 0.64
CHD1L-203ENST00000369259 LEO1Q8WVC0 666 aaPredicted RBP19.07■□□□□ 0.64
CHD1L-203ENST00000369259 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
CHD1L-203ENST00000369259 NECAB1Q8N987 351 aa19.06■□□□□ 0.64
CHD1L-203ENST00000369259 PPP6R1Q9UPN7 881 aa19.06■□□□□ 0.64
CHD1L-203ENST00000369259 ATP7BP35670 1465 aa19.06■□□□□ 0.64
CHD1L-203ENST00000369259 ADCK5Q3MIX3 580 aa19.06■□□□□ 0.64
CHD1L-203ENST00000369259 TFIP11Q9UBB9 837 aaKnown RBP19.06■□□□□ 0.64
CHD1L-203ENST00000369259 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
CHD1L-203ENST00000369259 MUM1L1Q5H9M0 696 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 FILIP1Q7Z7B0 1213 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 NME9Q86XW9 330 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 TXLNBQ8N3L3 684 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 BICD2Q8TD16 824 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 CHMP4AQ9BY43 222 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 LRRFIP2Q9Y608 721 aaKnown RBP19.05■□□□□ 0.64
CHD1L-203ENST00000369259 SOS1Q07889 1333 aaPredicted RBP19.05■□□□□ 0.64
CHD1L-203ENST00000369259 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
CHD1L-203ENST00000369259 PREX1Q8TCU6 1659 aa19.04■□□□□ 0.64
CHD1L-203ENST00000369259 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
CHD1L-203ENST00000369259 TPM4P67936 248 aa19.04■□□□□ 0.64
CHD1L-203ENST00000369259 SNW1Q13573 536 aaKnown RBP19.04■□□□□ 0.64
CHD1L-203ENST00000369259 CCDC93Q567U6 631 aa19.04■□□□□ 0.64
CHD1L-203ENST00000369259 PRPF40BQ6NWY9 871 aaKnown RBP19.04■□□□□ 0.64
CHD1L-203ENST00000369259 IRX3P78415 501 aaPredicted RBP19.03■□□□□ 0.64
CHD1L-203ENST00000369259 KCNB2Q92953 911 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 PGBD1Q96JS3 809 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
CHD1L-203ENST00000369259 ZRANB1Q9UGI0 708 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms