RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
PRKN-205ENST00000366897 KCNF1Q9H3M0 494 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 LIMCH1Q9UPQ0 1083 aa16.3■□□□□ 0.2
PRKN-205ENST00000366897 GJB2P29033 226 aa16.29■□□□□ 0.2
PRKN-205ENST00000366897 SLAIN2Q9P270 581 aa16.29■□□□□ 0.2
PRKN-205ENST00000366897 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
PRKN-205ENST00000366897 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
PRKN-205ENST00000366897 PTH1RQ03431 593 aa16.29■□□□□ 0.2
PRKN-205ENST00000366897 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
PRKN-205ENST00000366897 TCEANC2Q96MN5 208 aa16.28■□□□□ 0.2
PRKN-205ENST00000366897 PEAK1Q9H792 1746 aa16.28■□□□□ 0.2
PRKN-205ENST00000366897 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
PRKN-205ENST00000366897 PRPF40BQ6NWY9 871 aaKnown RBP16.28■□□□□ 0.2
PRKN-205ENST00000366897 MTERF4Q7Z6M4 381 aaKnown RBP16.28■□□□□ 0.2
PRKN-205ENST00000366897 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
PRKN-205ENST00000366897 TMEM87AQ8NBN3 555 aa16.28■□□□□ 0.2
PRKN-205ENST00000366897 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
PRKN-205ENST00000366897 ATP2B3Q16720 1220 aa16.28■□□□□ 0.2
PRKN-205ENST00000366897 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 OS9Q13438 667 aaPredicted RBP16.27■□□□□ 0.2
PRKN-205ENST00000366897 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 HDGFL1Q5TGJ6 251 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 SSH3Q8TE77 659 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 BCL2L12Q9HB09 334 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 KIF3AQ9Y496 699 aa16.27■□□□□ 0.2
PRKN-205ENST00000366897 ATF3P18847 181 aa16.27■□□□□ 0.19
PRKN-205ENST00000366897 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.19
PRKN-205ENST00000366897 MTMR6Q9Y217 621 aa16.27■□□□□ 0.19
PRKN-205ENST00000366897 SMAP1Q8IYB5 467 aaPredicted RBP16.26■□□□□ 0.19
PRKN-205ENST00000366897 OVOS2A0A0J9YW53 1432 aa16.26■□□□□ 0.19
PRKN-205ENST00000366897 OVOS2Q6IE36 1432 aa16.26■□□□□ 0.19
PRKN-205ENST00000366897 MON2Q7Z3U7 1717 aa16.26■□□□□ 0.19
PRKN-205ENST00000366897 PRIMPOLQ96LW4 560 aa16.26■□□□□ 0.19
PRKN-205ENST00000366897 FUCA2Q9BTY2 467 aa16.26■□□□□ 0.19
PRKN-205ENST00000366897 IGSF3O75054 1194 aa16.25■□□□□ 0.19
PRKN-205ENST00000366897 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
PRKN-205ENST00000366897 CKAP2LQ8IYA6 745 aa16.25■□□□□ 0.19
PRKN-205ENST00000366897 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
PRKN-205ENST00000366897 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
PRKN-205ENST00000366897 NRKQ7Z2Y5 1582 aa16.25■□□□□ 0.19
PRKN-205ENST00000366897 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.25■□□□□ 0.19
PRKN-205ENST00000366897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
PRKN-205ENST00000366897 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
PRKN-205ENST00000366897 CNTROBQ8N137 903 aa16.25■□□□□ 0.19
PRKN-205ENST00000366897 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 PTGS1P23219 599 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
PRKN-205ENST00000366897 KIAA1524Q8TCG1 905 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 PDRG1Q9NUG6 133 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 LIG1P18858 919 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
PRKN-205ENST00000366897 ME3Q16798 604 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 SPTLC3Q9NUV7 552 aa16.24■□□□□ 0.19
PRKN-205ENST00000366897 PA2G4Q9UQ80 394 aaKnown RBP16.24■□□□□ 0.19
PRKN-205ENST00000366897 ZSCAN20P17040 1043 aaPredicted RBP16.23■□□□□ 0.19
PRKN-205ENST00000366897 LRMPQ12912 555 aa16.23■□□□□ 0.19
PRKN-205ENST00000366897 TTC6Q86TZ1 520 aa16.23■□□□□ 0.19
PRKN-205ENST00000366897 IL17RAQ96F46 866 aa16.23■□□□□ 0.19
PRKN-205ENST00000366897 TFIP11Q9UBB9 837 aaKnown RBP16.23■□□□□ 0.19
PRKN-205ENST00000366897 USP6P35125 1406 aa16.23■□□□□ 0.19
PRKN-205ENST00000366897 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 PI4KAP2A4QPH2 592 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 PI4KAP1Q8N8J0 262 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
PRKN-205ENST00000366897 KIF1BPQ96EK5 621 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 NRBP1Q9UHY1 535 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 ADGRL3Q9HAR2 1447 aa16.22■□□□□ 0.19
PRKN-205ENST00000366897 KCNQ3O43525 872 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 LETM1O95202 739 aaPredicted RBP16.21■□□□□ 0.19
PRKN-205ENST00000366897 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRKN-205ENST00000366897 ITSN1Q15811 1721 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 KCNJ4P48050 445 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 ATP6V1DQ9Y5K8 247 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 TAF6LQ9Y6J9 622 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 AOX1Q06278 1338 aa16.21■□□□□ 0.19
PRKN-205ENST00000366897 DCCP43146 1447 aa16.21■□□□□ 0.18
PRKN-205ENST00000366897 POLA2Q14181 598 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 TPCN1Q9ULQ1 816 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 FLT4P35916 1363 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRKN-205ENST00000366897 NLRP6P59044 892 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 STK3Q13188 491 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 CCDC192P0DO97 292 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
PRKN-205ENST00000366897 DRC7Q8IY82 874 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 C16orf45Q96MC5 204 aaPredicted RBP16.2■□□□□ 0.18
PRKN-205ENST00000366897 CYP46A1Q9Y6A2 500 aa16.2■□□□□ 0.18
PRKN-205ENST00000366897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.2■□□□□ 0.18
PRKN-205ENST00000366897 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms