RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
FBXO28-201ENST00000366862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.1■□□□□ 0.49
FBXO28-201ENST00000366862 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■□□□□ 8.5
FBXO28-201ENST00000366862 IKQ13123 557 aaPredicted RBP18.1■□□□□ 0.49
FBXO28-201ENST00000366862 ABTB2Q8N961 1025 aa18.1■□□□□ 0.49
FBXO28-201ENST00000366862 SDSP20132 328 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 TYRO3Q06418 890 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 GOPCQ9HD26 462 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 LIG1P18858 919 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 BOLA2Q9H3K6 86 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 RTEL1-TNFRSF6BF6WH68 1400 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
FBXO28-201ENST00000366862 CTAGE1Q96RT6 745 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 PPP1R12BO60237 982 aaPredicted RBP18.09■□□□□ 0.49
FBXO28-201ENST00000366862 NSD2O96028 1365 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 PTGS1P23219 599 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 INTS4Q96HW7 963 aaKnown RBP18.09■□□□□ 0.49
FBXO28-201ENST00000366862 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
FBXO28-201ENST00000366862 JADE2Q9NQC1 790 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
FBXO28-201ENST00000366862 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.49
FBXO28-201ENST00000366862 C10orf67Q8IYJ2 551 aa18.08■□□□□ 0.48
FBXO28-201ENST00000366862 DACT1Q9NYF0 836 aa18.08■□□□□ 0.48
FBXO28-201ENST00000366862 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
FBXO28-201ENST00000366862 PIBF1Q8WXW3 757 aa18.08■□□□□ 0.48
FBXO28-201ENST00000366862 ECHDC1Q9NTX5 307 aa18.08■□□□□ 0.48
FBXO28-201ENST00000366862 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.08■□□□□ 0.48
FBXO28-201ENST00000366862 SSBP05455 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
FBXO28-201ENST00000366862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.08■□□□□ 0.48
FBXO28-201ENST00000366862 FAM114A1Q8IWE2 563 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
FBXO28-201ENST00000366862 LARP6Q9BRS8 491 aaKnown RBP18.07■□□□□ 0.48
FBXO28-201ENST00000366862 DNAJC25Q9H1X3 360 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 IGSF3O75054 1194 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 SYT1P21579 422 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 VPS18Q9P253 973 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 ZNF445P59923 1031 aa18.07■□□□□ 0.48
FBXO28-201ENST00000366862 SSRP1Q08945 709 aaKnown RBP18.06■□□□□ 0.48
FBXO28-201ENST00000366862 BTBD11A6QL63 1104 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 GOLIM4O00461 696 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 TDRD12Q587J7 1177 aaKnown RBP18.06■□□□□ 0.48
FBXO28-201ENST00000366862 KCNG4Q8TDN1 519 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 RBSNQ9H1K0 784 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 CTAGE9A4FU28 777 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 ESYT1Q9BSJ8 1104 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 NSRP1Q9H0G5 558 aaKnown RBP18.06■□□□□ 0.48
FBXO28-201ENST00000366862 AKAP2Q9Y2D5 859 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 NEK1Q96PY6 1258 aa18.06■□□□□ 0.48
FBXO28-201ENST00000366862 GOLGA8BA8MQT2 603 aa18.05■□□□□ 0.48
FBXO28-201ENST00000366862 OTUD6BQ8N6M0 293 aa18.05■□□□□ 0.48
FBXO28-201ENST00000366862 MRPS27Q92552 414 aaKnown RBP18.05■□□□□ 0.48
FBXO28-201ENST00000366862 AOPEPQ8N6M6 819 aa18.05■□□□□ 0.48
FBXO28-201ENST00000366862 MSL1Q68DK7 614 aa18.05■□□□□ 0.48
FBXO28-201ENST00000366862 TATP17735 454 aaPredicted RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 HDXQ7Z353 690 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 CYLC1P35663 651 aaPredicted RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 SYKP43405 635 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 CCDC121Q6ZUS5 278 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 PRG4Q92954 1404 aaPredicted RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 MTIF2P46199 727 aaKnown RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 KRBA2Q6ZNG9 492 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 CTCFLQ8NI51 663 aaPredicted RBP18.04■□□□□ 0.48
FBXO28-201ENST00000366862 RALGAPBQ86X10 1494 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 GSTTP1A0A1W2PQM5 241 aa18.04■□□□□ 0.48
FBXO28-201ENST00000366862 MYL6BP14649 208 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
FBXO28-201ENST00000366862 SPAG1Q07617 926 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 GBP6Q6ZN66 633 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 MCM10Q7L590 875 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
FBXO28-201ENST00000366862 SLC12A7Q9Y666 1083 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 N4BP3O15049 544 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 POTEJP0CG39 1038 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 C6orf163Q5TEZ5 329 aa18.03■□□□□ 0.48
FBXO28-201ENST00000366862 RIOK3O14730 519 aaKnown RBP18.02■□□□□ 0.48
FBXO28-201ENST00000366862 ZNF213O14771 459 aa18.02■□□□□ 0.48
FBXO28-201ENST00000366862 SYT10Q6XYQ8 523 aa18.02■□□□□ 0.48
FBXO28-201ENST00000366862 IFI16Q16666 785 aaKnown RBP18.02■□□□□ 0.48
FBXO28-201ENST00000366862 IFIT1P09914 478 aaKnown RBP18.02■□□□□ 0.48
FBXO28-201ENST00000366862 ATRIPQ8WXE1 791 aa18.02■□□□□ 0.48
FBXO28-201ENST00000366862 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
FBXO28-201ENST00000366862 NPHP3Q7Z494 1330 aa18.02■□□□□ 0.48
FBXO28-201ENST00000366862 GOLGA8AA7E2F4 631 aa18.02■□□□□ 0.47
FBXO28-201ENST00000366862 LARP1Q6PKG0 1096 aaKnown RBP18.02■□□□□ 0.47
FBXO28-201ENST00000366862 PARD3Q8TEW0 1356 aa18.02■□□□□ 0.47
FBXO28-201ENST00000366862 DNA2P51530 1060 aa18.02■□□□□ 0.47
FBXO28-201ENST00000366862 ORC3Q9UBD5 711 aaPredicted RBP18.02■□□□□ 0.47
FBXO28-201ENST00000366862 F6X3S4 739 aa18.01■□□□□ 0.47
FBXO28-201ENST00000366862 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
FBXO28-201ENST00000366862 PDE1AP54750 535 aa18.01■□□□□ 0.47
FBXO28-201ENST00000366862 ANKS4BQ8N8V4 417 aa18.01■□□□□ 0.47
FBXO28-201ENST00000366862 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms