RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 EIF4A1P60842 406 aaKnown RBP8.69□□□□□ -1.02
RNU1-55P-201ENST00000365510 NFIXQ14938 502 aa8.69□□□□□ -1.02
RNU1-55P-201ENST00000365510 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
RNU1-55P-201ENST00000365510 CNTNAP4Q9C0A0 1308 aa8.69□□□□□ -1.02
RNU1-55P-201ENST00000365510 C10orf71Q711Q0 1435 aa8.69□□□□□ -1.02
RNU1-55P-201ENST00000365510 POTECB2RU33 542 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 KRT24Q2M2I5 525 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 C8orf58Q8NAV2 365 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 KLRG1Q96E93 195 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 SMC4Q9NTJ3 1288 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 KIF16BQ96L93 1317 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 USP42Q9H9J4 1324 aaKnown RBP8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 KIF13BQ9NQT8 1826 aa8.68□□□□□ -1.02
RNU1-55P-201ENST00000365510 ELL2O00472 640 aaPredicted RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 KCNQ3O43525 872 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 VAMP4O75379 141 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 SBF1O95248 1867 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 SNRPA1P09661 255 aaKnown RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 C4AP0C0L4 1744 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 CYP19A1P11511 503 aaPredicted RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 RARSP54136 660 aaKnown RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 ALDH1L2Q3SY69 923 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 HDGFL1Q5TGJ6 251 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 ZNF496Q96IT1 587 aaPredicted RBP8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 HEG1Q9ULI3 1381 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 ZBTB1Q9Y2K1 713 aa8.67□□□□□ -1.02
RNU1-55P-201ENST00000365510 SERPINB2P05120 415 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 NEFLP07196 543 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 POTEIP0CG38 1075 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 POTEJP0CG39 1038 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 ADRA2BP18089 450 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 RRP1P56182 461 aaKnown RBP8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 CCDC30Q5VVM6 783 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 C2CD5Q86YS7 1000 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 BCL2L13Q9BXK5 485 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 STK31Q9BXU1 1019 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 SUPT16HQ9Y5B9 1047 aaKnown RBP8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 LAMB4A4D0S4 1761 aa8.66□□□□□ -1.02
RNU1-55P-201ENST00000365510 CARMIL3Q8ND23 1372 aa8.65□□□□□ -1.02
RNU1-55P-201ENST00000365510 ZPR1O75312 459 aa8.65□□□□□ -1.02
RNU1-55P-201ENST00000365510 VSIG10Q8N0Z9 540 aa8.65□□□□□ -1.02
RNU1-55P-201ENST00000365510 SSH1Q8WYL5 1049 aa8.65□□□□□ -1.02
RNU1-55P-201ENST00000365510 ZNF622Q969S3 477 aaKnown RBP eCLIP8.65□□□□□ -1.02
RNU1-55P-201ENST00000365510 BRCA1P38398 1863 aaKnown RBP8.65□□□□□ -1.02
RNU1-55P-201ENST00000365510 COL5A3P25940 1745 aaPredicted RBP8.65□□□□□ -1.03
RNU1-55P-201ENST00000365510 RNF123Q5XPI4 1314 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 NFKBIEO00221 500 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 C21orf2O43822 256 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 BCAR3O75815 825 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 EIF2S2P20042 333 aaKnown RBP8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 JMYQ8N9B5 988 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 TEX13AQ9BXU3 409 aaPredicted RBP8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 NARFQ9UHQ1 456 aa8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 ZNF330Q9Y3S2 320 aaPredicted RBP8.64□□□□□ -1.03
RNU1-55P-201ENST00000365510 TJP1Q07157 1748 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 PRAMEF22A3QJZ6 481 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 STARD3NLO95772 234 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 A1BGP04217 495 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 OLFM4Q6UX06 510 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 SLC51AQ86UW1 340 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 FTSJ3Q8IY81 847 aaKnown RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 TNS4Q8IZW8 715 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 FRAT1Q92837 279 aaPredicted RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 CHPF2Q9P2E5 772 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 DBF4Q9UBU7 674 aaPredicted RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 AFDNP55196 1824 aaKnown RBP8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 WDR90Q96KV7 1748 aa8.63□□□□□ -1.03
RNU1-55P-201ENST00000365510 PTPRCP08575 1304 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 GLTPD2A6NH11 291 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 TCERG1O14776 1098 aaKnown RBP8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 DDNO94850 711 aaPredicted RBP8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 HSPA1AP0DMV8 641 aaKnown RBP8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 HSPA1BP0DMV9 641 aaKnown RBP8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 MS4A1P11836 297 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 FSTL1Q12841 308 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 TTLL6Q8N841 843 aa8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 MKRN1Q9UHC7 482 aaKnown RBP8.62□□□□□ -1.03
RNU1-55P-201ENST00000365510 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 SLC4A2P04920 1241 aa8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 VEGFAP15692 232 aaPredicted RBP8.61□□□□□ -1.03
RNU1-55P-201ENST00000365510 LMNB1P20700 586 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms