RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 FZD6O60353 706 aa9.32□□□□□ -0.92
RNU4-39P-201ENST00000362455 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
RNU4-39P-201ENST00000362455 RBCK1Q9BYM8 510 aa9.32□□□□□ -0.92
RNU4-39P-201ENST00000362455 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
RNU4-39P-201ENST00000362455 BMP2P12643 396 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 ZNF16P17020 682 aaPredicted RBP9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 CTC1Q2NKJ3 1217 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 TMC7Q7Z402 723 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 ATCAYQ86WG3 371 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 ETFBKMTQ8IXQ9 262 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 GIPC2Q8TF65 315 aa9.31□□□□□ -0.92
RNU4-39P-201ENST00000362455 SPATA31C2B4DYI2 1134 aa9.3□□□□□ -0.92
RNU4-39P-201ENST00000362455 PHKA2P46019 1235 aa9.3□□□□□ -0.92
RNU4-39P-201ENST00000362455 AIDAQ96BJ3 306 aa9.3□□□□□ -0.92
RNU4-39P-201ENST00000362455 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
RNU4-39P-201ENST00000362455 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
RNU4-39P-201ENST00000362455 NBPF1Q3BBV0 1214 aa9.29□□□□□ -0.92
RNU4-39P-201ENST00000362455 MRPL14Q6P1L8 145 aaKnown RBP9.29□□□□□ -0.92
RNU4-39P-201ENST00000362455 FBXO33Q7Z6M2 555 aa9.29□□□□□ -0.92
RNU4-39P-201ENST00000362455 RNF217Q8TC41 542 aa9.29□□□□□ -0.92
RNU4-39P-201ENST00000362455 POU4F2Q12837 409 aa9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 NBPF10Q6P3W6 841 aaKnown RBP9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 PRICKLE2Q7Z3G6 844 aa9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 RHPN1Q8TCX5 695 aa9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 TMC1Q8TDI8 760 aa9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 CITED4Q96RK1 184 aa9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 ZDHHC3Q9NYG2 299 aa9.28□□□□□ -0.92
RNU4-39P-201ENST00000362455 ZAP70P43403 619 aa9.27□□□□□ -0.93
RNU4-39P-201ENST00000362455 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
RNU4-39P-201ENST00000362455 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
RNU4-39P-201ENST00000362455 BCS1LQ9Y276 419 aa9.27□□□□□ -0.93
RNU4-39P-201ENST00000362455 AXIN1O15169 862 aa9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 BMP1P13497 986 aa9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 TAGLNQ01995 201 aaKnown RBP9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 LYSMD3Q7Z3D4 306 aa9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 TREML1Q86YW5 311 aa9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 CRIPAKQ8N1N5 446 aa9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 POLIQ9UNA4 740 aa9.26□□□□□ -0.93
RNU4-39P-201ENST00000362455 TREHO43280 583 aa9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 P4HBP07237 508 aaKnown RBP9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 EAPPQ56P03 285 aaPredicted RBP9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 EDEM1Q92611 657 aa9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 MRRFQ96E11 262 aaKnown RBP9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 KLRG1Q96E93 195 aa9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 FAM129BQ96TA1 746 aa9.25□□□□□ -0.93
RNU4-39P-201ENST00000362455 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 IGHA2P01877 340 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 RHOQP17081 205 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 ATP4AP20648 1035 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 MZF1P28698 734 aaPredicted RBP9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 PDE3BQ13370 1112 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 SCARF1Q14162 830 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 WDR44Q5JSH3 913 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 DMRTB1Q96MA1 342 aa9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
RNU4-39P-201ENST00000362455 TGFBR3LH3BV60 316 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 GPR182O15218 404 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 PDGFAP04085 211 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 FMR1Q06787 632 aaKnown RBP eCLIP9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 HIF1AQ16665 826 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 TRIM46Q7Z4K8 759 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 GJD3Q8N144 294 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 ZNF280CQ8ND82 737 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 HSH2DQ96JZ2 352 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 SUSD3Q96L08 255 aa9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
RNU4-39P-201ENST00000362455 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
RNU4-39P-201ENST00000362455 MICAL2O94851 1124 aa9.22□□□□□ -0.93
RNU4-39P-201ENST00000362455 DSC3Q14574 896 aa9.22□□□□□ -0.93
RNU4-39P-201ENST00000362455 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
RNU4-39P-201ENST00000362455 TIMMDC1Q9NPL8 285 aa9.22□□□□□ -0.93
RNU4-39P-201ENST00000362455 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
RNU4-39P-201ENST00000362455 A0A1B0GTH6 734 aa9.21□□□□□ -0.94
RNU4-39P-201ENST00000362455 USP5P45974 858 aa9.21□□□□□ -0.94
RNU4-39P-201ENST00000362455 PLCB3Q01970 1234 aa9.21□□□□□ -0.94
RNU4-39P-201ENST00000362455 EHHADHQ08426 723 aa9.21□□□□□ -0.94
RNU4-39P-201ENST00000362455 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
RNU4-39P-201ENST00000362455 MSX1P28360 303 aa9.2□□□□□ -0.94
RNU4-39P-201ENST00000362455 ARSJQ5FYB0 599 aaPredicted RBP9.2□□□□□ -0.94
RNU4-39P-201ENST00000362455 IER5Q5VY09 327 aa9.2□□□□□ -0.94
RNU4-39P-201ENST00000362455 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
RNU4-39P-201ENST00000362455 ZIC5Q96T25 663 aa9.2□□□□□ -0.94
RNU4-39P-201ENST00000362455 DMGDHQ9UI17 866 aaKnown RBP9.2□□□□□ -0.94
RNU4-39P-201ENST00000362455 OPLAHO14841 1288 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 PCSK2P16519 638 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 MAPK8P45983 427 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 IDH3AP50213 366 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 Q6ZNB5 142 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 ALKBH8Q96BT7 664 aaKnown RBP9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 ZFP42Q96MM3 310 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 NIF3L1Q9GZT8 377 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 FAM13BQ9NYF5 915 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 ANKIB1Q9P2G1 1089 aa9.19□□□□□ -0.94
RNU4-39P-201ENST00000362455 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms