RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TXLNAP40222 546 aa6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 FMR1Q06787 632 aaKnown RBP eCLIP6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 DSC3Q14574 896 aa6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 EAPPQ56P03 285 aaPredicted RBP6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 WDR44Q5JSH3 913 aa6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 DMRTB1Q96MA1 342 aa6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 IGSF5Q9NSI5 407 aa6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 KLK14Q9P0G3 267 aa6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
RNU6-28P-201ENST00000362378 UPP2O95045 317 aa6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 P4HBP07237 508 aaKnown RBP6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 MZF1P28698 734 aaPredicted RBP6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 CTSOP43234 321 aaPredicted RBP6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 PLA2G4AP47712 749 aa6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 PDE3BQ13370 1112 aa6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 AAMPQ13685 434 aa6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 HIF1AQ16665 826 aa6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 GJD3Q8N144 294 aa6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 ALKBH8Q96BT7 664 aaKnown RBP6.23□□□□□ -1.41
RNU6-28P-201ENST00000362378 AVPP01185 164 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 ZAP70P43403 619 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 USP5P45974 858 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 PLCB3Q01970 1234 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 TAGLNQ01995 201 aaKnown RBP6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 NBPF1Q3BBV0 1214 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 NBPF10Q6P3W6 841 aaKnown RBP6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 ATCAYQ86WG3 371 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 POLIQ9UNA4 740 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 BCS1LQ9Y276 419 aa6.22□□□□□ -1.41
RNU6-28P-201ENST00000362378 NRG2O14511 850 aaPredicted RBP6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 GPR182O15218 404 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 PDGFAP04085 211 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 IER5Q5VY09 327 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 MRPL14Q6P1L8 145 aaKnown RBP6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 TREML1Q86YW5 311 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 RNF217Q8TC41 542 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 RHPN1Q8TCX5 695 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 TMC1Q8TDI8 760 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 EDEM1Q92611 657 aa6.21□□□□□ -1.42
RNU6-28P-201ENST00000362378 TGFBR3LH3BV60 316 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 BMP2P12643 396 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 TATP17735 454 aaPredicted RBP6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 FGD1P98174 961 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 EHHADHQ08426 723 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 POU4F2Q12837 409 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 SUSD3Q96L08 255 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 FAM13BQ9NYF5 915 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 DMGDHQ9UI17 866 aaKnown RBP6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 PDZRN3Q9UPQ7 1066 aa6.2□□□□□ -1.42
RNU6-28P-201ENST00000362378 MICAL2O94851 1124 aa6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 ATP4AP20648 1035 aa6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 PHKA2P46019 1235 aa6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 DNM1Q05193 864 aaKnown RBP6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 LYSMD3Q7Z3D4 306 aa6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 PRICKLE2Q7Z3G6 844 aa6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
RNU6-28P-201ENST00000362378 A0A1B0GTH6 734 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 OPLAHO14841 1288 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 RPLP1P05386 114 aaKnown RBP6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 PCSK2P16519 638 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 C6orf118Q5T5N4 469 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 KLRG1Q96E93 195 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 BCL11AQ9H165 835 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 ANKIB1Q9P2G1 1089 aa6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 SOS2Q07890 1332 aaPredicted RBP6.18□□□□□ -1.42
RNU6-28P-201ENST00000362378 TTLL8A6PVC2 850 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 PRPF40AO75400 957 aaKnown RBP6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 LDHBP07195 334 aaKnown RBP6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 ENOX2Q16206 610 aaKnown RBP6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 CTC1Q2NKJ3 1217 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 TREML4Q6UXN2 200 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 ZNF280CQ8ND82 737 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 GPR152Q8TDT2 470 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 NUDT16Q96DE0 195 aaKnown RBP6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 ZIC5Q96T25 663 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 NIF3L1Q9GZT8 377 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 TIMMDC1Q9NPL8 285 aa6.17□□□□□ -1.42
RNU6-28P-201ENST00000362378 FAM187AA6NFU0 413 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 MSX1P28360 303 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 INPP5BP32019 993 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 MAPK8P45983 427 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 IDH3AP50213 366 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 SCARF1Q14162 830 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 MRPL58Q14197 206 aaKnown RBP6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 BICDL1Q6ZP65 573 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 TRIM46Q7Z4K8 759 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 PIK3R5Q8WYR1 880 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 HSH2DQ96JZ2 352 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 GGNBP2Q9H3C7 697 aa6.16□□□□□ -1.42
RNU6-28P-201ENST00000362378 DGAT1O75907 488 aa6.15□□□□□ -1.42
RNU6-28P-201ENST00000362378 NEFLP07196 543 aa6.15□□□□□ -1.42
RNU6-28P-201ENST00000362378 ARSDP51689 593 aa6.15□□□□□ -1.42
RNU6-28P-201ENST00000362378 SUZ12Q15022 739 aaKnown RBP6.15□□□□□ -1.42
RNU6-28P-201ENST00000362378 XKR5Q6UX68 686 aa6.15□□□□□ -1.42
RNU6-28P-201ENST00000362378 BTLAQ7Z6A9 289 aa6.15□□□□□ -1.42
RNU6-28P-201ENST00000362378 CRISPLD1Q9H336 500 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms