RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CATIPQ7Z7H3 387 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 INSRP06213 1382 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 KDM5DQ9BY66 1539 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 HSP90AB2PQ58FF8 381 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 KSR2Q6VAB6 950 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 DCAF5Q96JK2 942 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 POLKQ9UBT6 870 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 LIMCH1Q9UPQ0 1083 aa5.69□□□□□ -1.5
SCN3A-202ENST00000360093 IP6K1Q92551 441 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 NUP62CLQ9H1M0 184 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PCDH11XQ9BZA7 1347 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PCDH11YQ9BZA8 1340 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 F6X3S4 739 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 EIF4A2Q14240 407 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 HSP90B2PQ58FF3 399 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 SLC12A7Q9Y666 1083 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PREX2Q70Z35 1606 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 GRM8O00222 908 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PDE4CQ08493 712 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 DDB1Q16531 1140 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 TMTC2Q8N394 836 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 TESK2Q96S53 571 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 PPP1R12BO60237 982 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 DESP17661 470 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 CEBPZQ03701 1054 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 SETDB2Q96T68 719 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 ARHGEF10O15013 1369 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 MINDY4BA8MYZ0 360 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 MPHOSPH10O00566 681 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 KIF20AO95235 890 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 FGFR1OPO95684 399 aaKnown RBP5.68□□□□□ -1.5
SCN3A-202ENST00000360093 UBE3BQ7Z3V4 1068 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 A0A1W2PP64 1363 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 SBNO1A3KN83 1393 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 CAGE1Q8TC20 777 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 C8orf76Q96K31 380 aa5.68□□□□□ -1.5
SCN3A-202ENST00000360093 TNNT3P45378 269 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC85AQ96PX6 553 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MAP7D2Q96T17 732 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 GCP02774 474 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 HLA-DOAP06340 250 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 KCNA6P17658 529 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 IL15P40933 162 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 SSRP1Q08945 709 aaKnown RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CUL5Q93034 780 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ZBTB3Q9H5J0 574 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 HOXB7P09629 217 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ANAPC15P60006 121 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NUCB1Q02818 461 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MAP3K11Q16584 847 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 TMEM266Q2M3C6 531 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 PRPF40BQ6NWY9 871 aaKnown RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 IQCEQ6IPM2 695 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NLRP3Q96P20 1036 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC8Q9H0W5 538 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CNNM2Q9H8M5 875 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 UBAP1LF5GYI3 381 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MYO1BO43795 1136 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 MCM4P33991 863 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ZNF397Q8NF99 534 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 CRNKL1Q9BZJ0 848 aaKnown RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ERLIN2O94905 339 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ATP6V1AP38606 617 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NBPF6Q5VWK0 638 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NBPF5PQ86XG9 351 aaPredicted RBP5.67□□□□□ -1.5
SCN3A-202ENST00000360093 NBPF4Q96M43 638 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 TTC41PQ6P2S7 1318 aa5.67□□□□□ -1.5
SCN3A-202ENST00000360093 TSPOAP1O95153 1857 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ZCCHC11Q5TAX3 1644 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 TTC22Q5TAA0 569 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ANKRD18AQ8IVF6 992 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ANKRD44Q8N8A2 993 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 LINS1Q8NG48 757 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 KRT23Q9C075 422 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 CAVIN2O95810 425 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 MRPL50Q8N5N7 158 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 NCOA7Q8NI08 942 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 IFIT3O14879 490 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 GPTP24298 496 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 UPF3BQ9BZI7 483 aaKnown RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 GNAT2P19087 354 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ATP8B2P98198 1209 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 KANK3Q6NY19 840 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 STK11IPQ8N1F8 1099 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 DEF6Q9H4E7 631 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 FAM83GA6ND36 823 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 SMARCA5O60264 1052 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 CHRNA2Q15822 529 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 MFSD6Q6ZSS7 791 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 RHPN1Q8TCX5 695 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 ZSCAN16Q9H4T2 348 aaPredicted RBP5.66□□□□□ -1.5
SCN3A-202ENST00000360093 HECW2Q9P2P5 1572 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 C6orf229H3BNL8 230 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 PPP4R3AQ6IN85 833 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms