RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GJB2P29033 226 aa21.24■□□□□ 0.99
SHANK1-202ENST00000359082 PSMD1Q99460 953 aa21.24■□□□□ 0.99
SHANK1-202ENST00000359082 PAFAH1B1P43034 410 aa21.24■□□□□ 0.99
SHANK1-202ENST00000359082 A0A087WZG4 1122 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 BAG4O95429 457 aaKnown RBP21.23■□□□□ 0.99
SHANK1-202ENST00000359082 VAT1LQ9HCJ6 419 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 USP25Q9UHP3 1055 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 ANKRD18BA2A2Z9 1011 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 SPDYE4A6NLX3 237 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 WAPLQ7Z5K2 1190 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 CGNQ9P2M7 1197 aaKnown RBP21.23■□□□□ 0.99
SHANK1-202ENST00000359082 PRPF4BQ13523 1007 aaKnown RBP21.23■□□□□ 0.99
SHANK1-202ENST00000359082 RAB11FIP4Q86YS3 637 aa21.23■□□□□ 0.99
SHANK1-202ENST00000359082 SMC1AQ14683 1233 aaKnown RBP21.22■□□□□ 0.99
SHANK1-202ENST00000359082 C16orf45Q96MC5 204 aaPredicted RBP21.22■□□□□ 0.99
SHANK1-202ENST00000359082 CCDC40Q4G0X9 1142 aa21.22■□□□□ 0.99
SHANK1-202ENST00000359082 ALS2CR12Q96Q35 445 aa21.22■□□□□ 0.99
SHANK1-202ENST00000359082 COMMD10Q9Y6G5 202 aa21.22■□□□□ 0.99
SHANK1-202ENST00000359082 SSH1Q8WYL5 1049 aa21.22■□□□□ 0.99
SHANK1-202ENST00000359082 HLTFQ14527 1009 aaKnown RBP eCLIP21.21■□□□□ 0.99
SHANK1-202ENST00000359082 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 TCERG1LQ5VWI1 586 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 LIMCH1Q9UPQ0 1083 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 RAPGEF3O95398 923 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 CALML4Q96GE6 196 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 GDPD2Q9HCC8 539 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 CTAGE5O15320 804 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 MMRN2Q9H8L6 949 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 PANK2Q9BZ23 570 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 PPFIA3O75145 1194 aa21.21■□□□□ 0.99
SHANK1-202ENST00000359082 PAXIP1Q6ZW49 1069 aaPredicted RBP21.21■□□□□ 0.99
SHANK1-202ENST00000359082 RNF41Q9H4P4 317 aaPredicted RBP21.21■□□□□ 0.99
SHANK1-202ENST00000359082 DAPK1P53355 1430 aa21.2■□□□□ 0.98
SHANK1-202ENST00000359082 GPTP24298 496 aa21.2■□□□□ 0.98
SHANK1-202ENST00000359082 ALDH1L2Q3SY69 923 aa21.2■□□□□ 0.98
SHANK1-202ENST00000359082 PUF60Q9UHX1 559 aaKnown RBP21.2■□□□□ 0.98
SHANK1-202ENST00000359082 PRC1O43663 620 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 RARSP54136 660 aaKnown RBP21.19■□□□□ 0.98
SHANK1-202ENST00000359082 STX1AQ16623 288 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 DNAAF4Q8WXU2 420 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 TFIP11Q9UBB9 837 aaKnown RBP21.19■□□□□ 0.98
SHANK1-202ENST00000359082 KIF20AO95235 890 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 TNPO1Q92973 898 aaKnown RBP21.19■□□□□ 0.98
SHANK1-202ENST00000359082 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 GOLIM4O00461 696 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 SPECC1Q5M775 1068 aa21.19■□□□□ 0.98
SHANK1-202ENST00000359082 TMEM67Q5HYA8 995 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 CTR9Q6PD62 1173 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 MAATS1Q7Z4T9 603 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 TRERF1Q96PN7 1200 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 TIAM1Q13009 1591 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 NKTRP30414 1462 aaKnown RBP21.18■□□□□ 0.98
SHANK1-202ENST00000359082 NOP2P46087 812 aaKnown RBP21.18■□□□□ 0.98
SHANK1-202ENST00000359082 NME9Q86XW9 330 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 SYCP3Q8IZU3 236 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 TAOK3Q9H2K8 898 aa21.18■□□□□ 0.98
SHANK1-202ENST00000359082 TMEM87AQ8NBN3 555 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 MAP3K2Q9Y2U5 619 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 HMGB2P26583 209 aaKnown RBP21.17■□□□□ 0.98
SHANK1-202ENST00000359082 MICALCLQ6ZW33 695 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 SLF2Q8IX21 1173 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 ADAMTS2O95450 1211 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 HAND2P61296 217 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 SAMM50Q9Y512 469 aa21.17■□□□□ 0.98
SHANK1-202ENST00000359082 AMPD3Q01432 767 aa21.16■□□□□ 0.98
SHANK1-202ENST00000359082 TTC16Q8NEE8 873 aa21.16■□□□□ 0.98
SHANK1-202ENST00000359082 EVI5LQ96CN4 794 aa21.16■□□□□ 0.98
SHANK1-202ENST00000359082 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
SHANK1-202ENST00000359082 IDEP14735 1019 aa21.16■□□□□ 0.98
SHANK1-202ENST00000359082 ZBTB3Q9H5J0 574 aa21.16■□□□□ 0.98
SHANK1-202ENST00000359082 KAT14Q9H8E8 782 aa21.16■□□□□ 0.98
SHANK1-202ENST00000359082 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 ADCY5O95622 1261 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 AMOTQ4VCS5 1084 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 NAA15Q9BXJ9 866 aaKnown RBP21.15■□□□□ 0.98
SHANK1-202ENST00000359082 TCP11L1Q9NUJ3 509 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 HYPKQ9NX55 129 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 CETN1Q12798 172 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 DRC1Q96MC2 740 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 SLC26A6Q9BXS9 759 aa21.15■□□□□ 0.98
SHANK1-202ENST00000359082 CCDC175P0C221 793 aa21.14■□□□□ 0.98
SHANK1-202ENST00000359082 DDX19AQ9NUU7 478 aaKnown RBP21.14■□□□□ 0.98
SHANK1-202ENST00000359082 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.98
SHANK1-202ENST00000359082 C6orf229H3BNL8 230 aa21.14■□□□□ 0.98
SHANK1-202ENST00000359082 JADE2Q9NQC1 790 aa21.14■□□□□ 0.98
SHANK1-202ENST00000359082 HOMER2Q9NSB8 354 aa21.14■□□□□ 0.98
SHANK1-202ENST00000359082 IQGAP2Q13576 1575 aa21.14■□□□□ 0.98
SHANK1-202ENST00000359082 FAM114A1Q8IWE2 563 aa21.14■□□□□ 0.97
SHANK1-202ENST00000359082 SNRKQ9NRH2 765 aa21.14■□□□□ 0.97
SHANK1-202ENST00000359082 TSHZ3Q63HK5 1081 aa21.14■□□□□ 0.97
SHANK1-202ENST00000359082 FEZ1Q99689 392 aa21.14■□□□□ 0.97
SHANK1-202ENST00000359082 MYO1BO43795 1136 aa21.13■□□□□ 0.97
SHANK1-202ENST00000359082 IARSP41252 1262 aaKnown RBP21.13■□□□□ 0.97
SHANK1-202ENST00000359082 METAP2P50579 478 aaKnown RBP eCLIP21.13■□□□□ 0.97
SHANK1-202ENST00000359082 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
SHANK1-202ENST00000359082 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
SHANK1-202ENST00000359082 TSPY2A6NKD2 308 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms