RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 KIF6Q6ZMV9 814 aa31.23■■■□□ 2.59
ALKAL1-201ENST00000358543 COPS6Q7L5N1 327 aa31.23■■■□□ 2.59
ALKAL1-201ENST00000358543 MAP3K15Q6ZN16 1313 aa31.23■■■□□ 2.59
ALKAL1-201ENST00000358543 XAGE3Q8WTP9 111 aa31.22■■■□□ 2.59
ALKAL1-201ENST00000358543 ZNF428Q96B54 188 aa31.22■■■□□ 2.59
ALKAL1-201ENST00000358543 LRP5O75197 1615 aa31.21■■■□□ 2.59
ALKAL1-201ENST00000358543 ZNF652Q9Y2D9 606 aa31.21■■■□□ 2.59
ALKAL1-201ENST00000358543 SCN7AQ01118 1682 aa31.2■■■□□ 2.59
ALKAL1-201ENST00000358543 TM4SF1P30408 202 aa31.2■■■□□ 2.59
ALKAL1-201ENST00000358543 SLC4A2P04920 1241 aa31.19■■■□□ 2.58
ALKAL1-201ENST00000358543 BCORQ6W2J9 1755 aa31.19■■■□□ 2.58
ALKAL1-201ENST00000358543 CACNA1FO60840 1977 aa31.18■■■□□ 2.58
ALKAL1-201ENST00000358543 AIMP1Q12904 312 aaKnown RBP31.18■■■□□ 2.58
ALKAL1-201ENST00000358543 MMP10P09238 476 aa31.17■■■□□ 2.58
ALKAL1-201ENST00000358543 HLFQ16534 295 aa31.17■■■□□ 2.58
ALKAL1-201ENST00000358543 PHAXQ9H814 394 aaKnown RBP31.17■■■□□ 2.58
ALKAL1-201ENST00000358543 TCERG1O14776 1098 aaKnown RBP31.16■■■□□ 2.58
ALKAL1-201ENST00000358543 NFIXQ14938 502 aa31.16■■■□□ 2.58
ALKAL1-201ENST00000358543 TBC1D9BQ66K14 1250 aa31.15■■■□□ 2.58
ALKAL1-201ENST00000358543 GIGYF2Q6Y7W6 1299 aaKnown RBP31.15■■■□□ 2.58
ALKAL1-201ENST00000358543 ANKRD13DQ6ZTN6 518 aa31.15■■■□□ 2.58
ALKAL1-201ENST00000358543 PLBD2Q8NHP8 589 aa31.15■■■□□ 2.58
ALKAL1-201ENST00000358543 ZBTB3Q9H5J0 574 aa31.15■■■□□ 2.58
ALKAL1-201ENST00000358543 PARP3Q9Y6F1 533 aa31.14■■■□□ 2.58
ALKAL1-201ENST00000358543 POLRMTO00411 1230 aaKnown RBP31.12■■■□□ 2.57
ALKAL1-201ENST00000358543 DDR1Q08345 913 aa31.12■■■□□ 2.57
ALKAL1-201ENST00000358543 ALDH1L2Q3SY69 923 aa31.12■■■□□ 2.57
ALKAL1-201ENST00000358543 SETDB2Q96T68 719 aa31.12■■■□□ 2.57
ALKAL1-201ENST00000358543 SRCAPQ6ZRS2 3230 aa31.11■■■□□ 2.57
ALKAL1-201ENST00000358543 DDX58O95786 925 aaKnown RBP31.11■■■□□ 2.57
ALKAL1-201ENST00000358543 NUP98P52948 1817 aa31.1■■■□□ 2.57
ALKAL1-201ENST00000358543 ATP10DQ9P241 1426 aa31.1■■■□□ 2.57
ALKAL1-201ENST00000358543 HSP90AB3PQ58FF7 597 aa31.1■■■□□ 2.57
ALKAL1-201ENST00000358543 PPP1R1BQ9UD71 204 aaPredicted RBP31.1■■■□□ 2.57
ALKAL1-201ENST00000358543 FLIIQ13045 1269 aa31.09■■■□□ 2.57
ALKAL1-201ENST00000358543 BICDL1Q6ZP65 573 aa31.09■■■□□ 2.57
ALKAL1-201ENST00000358543 G2E3Q7L622 706 aa31.09■■■□□ 2.57
ALKAL1-201ENST00000358543 NIP7Q9Y221 180 aaKnown RBP eCLIP31.09■■■□□ 2.57
ALKAL1-201ENST00000358543 ZNF34Q8IZ26 560 aa31.08■■■□□ 2.57
ALKAL1-201ENST00000358543 SSH1Q8WYL5 1049 aa31.08■■■□□ 2.57
ALKAL1-201ENST00000358543 CARMIL3Q8ND23 1372 aa31.07■■■□□ 2.56
ALKAL1-201ENST00000358543 TCIRG1Q13488 830 aa31.07■■■□□ 2.56
ALKAL1-201ENST00000358543 RIC3Q7Z5B4 369 aa31.07■■■□□ 2.56
ALKAL1-201ENST00000358543 MRPL50Q8N5N7 158 aaKnown RBP31.07■■■□□ 2.56
ALKAL1-201ENST00000358543 SERPINB2P05120 415 aa31.06■■■□□ 2.56
ALKAL1-201ENST00000358543 KSR2Q6VAB6 950 aa31.06■■■□□ 2.56
ALKAL1-201ENST00000358543 YTHDC1Q96MU7 727 aaKnown RBP31.04■■■□□ 2.56
ALKAL1-201ENST00000358543 PI4KAP2A4QPH2 592 aa31.03■■■□□ 2.56
ALKAL1-201ENST00000358543 RARSP54136 660 aaKnown RBP31.03■■■□□ 2.56
ALKAL1-201ENST00000358543 BRPF1P55201 1214 aaPredicted RBP31.03■■■□□ 2.56
ALKAL1-201ENST00000358543 PARP10Q53GL7 1025 aa31.03■■■□□ 2.56
ALKAL1-201ENST00000358543 PI4KAP1Q8N8J0 262 aa31.03■■■□□ 2.56
ALKAL1-201ENST00000358543 CD2APQ9Y5K6 639 aa31.03■■■□□ 2.56
ALKAL1-201ENST00000358543 FKBP5Q13451 457 aaPredicted RBP31.02■■■□□ 2.56
ALKAL1-201ENST00000358543 NRXN2Q9P2S2 1712 aa31.01■■■□□ 2.56
ALKAL1-201ENST00000358543 TRIM28Q13263 835 aaKnown RBP31.01■■■□□ 2.55
ALKAL1-201ENST00000358543 METTL22Q9BUU2 404 aaPredicted RBP31.01■■■□□ 2.55
ALKAL1-201ENST00000358543 MAP3K2Q9Y2U5 619 aa31.01■■■□□ 2.55
ALKAL1-201ENST00000358543 UBN2Q6ZU65 1347 aa31■■■□□ 2.55
ALKAL1-201ENST00000358543 GPTP24298 496 aa31■■■□□ 2.55
ALKAL1-201ENST00000358543 TPTE2Q6XPS3 522 aa31■■■□□ 2.55
ALKAL1-201ENST00000358543 ISCA1Q9BUE6 129 aa31■■■□□ 2.55
ALKAL1-201ENST00000358543 FHDC1Q9C0D6 1143 aaPredicted RBP31■■■□□ 2.55
ALKAL1-201ENST00000358543 SMC4Q9NTJ3 1288 aa31■■■□□ 2.55
ALKAL1-201ENST00000358543 ADCY9O60503 1353 aa31■■■□□ 2.55
ALKAL1-201ENST00000358543 AFDNP55196 1824 aaKnown RBP30.99■■■□□ 2.55
ALKAL1-201ENST00000358543 NBPF5PQ86XG9 351 aaPredicted RBP30.99■■■□□ 2.55
ALKAL1-201ENST00000358543 ARFGEF2Q9Y6D5 1785 aa30.99■■■□□ 2.55
ALKAL1-201ENST00000358543 IBTKQ9P2D0 1353 aaPredicted RBP30.98■■■□□ 2.55
ALKAL1-201ENST00000358543 BCL2L13Q9BXK5 485 aa30.98■■■□□ 2.55
ALKAL1-201ENST00000358543 NYXQ9GZU5 481 aa30.98■■■□□ 2.55
ALKAL1-201ENST00000358543 C10orf71Q711Q0 1435 aa30.98■■■□□ 2.55
ALKAL1-201ENST00000358543 PTPRCP08575 1304 aa30.98■■■□□ 2.55
ALKAL1-201ENST00000358543 ANKRD36CQ5JPF3 1778 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 SUSD4Q5VX71 490 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 PRR5LQ6MZQ0 368 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 PPP1R42Q7Z4L9 355 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 NLRP10Q86W26 655 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 CNBD1Q8NA66 436 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 SYT17Q9BSW7 474 aa30.97■■■□□ 2.55
ALKAL1-201ENST00000358543 DNAAF4Q8WXU2 420 aa30.96■■■□□ 2.55
ALKAL1-201ENST00000358543 MYD88Q99836 296 aa30.95■■■□□ 2.55
ALKAL1-201ENST00000358543 KIF13BQ9NQT8 1826 aa30.94■■■□□ 2.54
ALKAL1-201ENST00000358543 ATP5J2-PTCD1G3V325 749 aa30.94■■■□□ 2.54
ALKAL1-201ENST00000358543 NEXNQ0ZGT2 675 aa30.94■■■□□ 2.54
ALKAL1-201ENST00000358543 RNF123Q5XPI4 1314 aa30.94■■■□□ 2.54
ALKAL1-201ENST00000358543 TGFB2P61812 414 aa30.93■■■□□ 2.54
ALKAL1-201ENST00000358543 ST5P78524 1137 aa30.93■■■□□ 2.54
ALKAL1-201ENST00000358543 KLHL34Q8N239 644 aa30.93■■■□□ 2.54
ALKAL1-201ENST00000358543 CCDC191Q8NCU4 936 aa30.93■■■□□ 2.54
ALKAL1-201ENST00000358543 UTP14AQ9BVJ6 771 aaKnown RBP30.93■■■□□ 2.54
ALKAL1-201ENST00000358543 NPHP1O15259 732 aa30.92■■■□□ 2.54
ALKAL1-201ENST00000358543 NTSR2O95665 410 aa30.92■■■□□ 2.54
ALKAL1-201ENST00000358543 BRIP1Q9BX63 1249 aa30.92■■■□□ 2.54
ALKAL1-201ENST00000358543 FAM177BA6PVY3 158 aa30.91■■■□□ 2.54
ALKAL1-201ENST00000358543 GTF2E1P29083 439 aaPredicted RBP30.91■■■□□ 2.54
ALKAL1-201ENST00000358543 F6X3S4 739 aa30.9■■■□□ 2.54
ALKAL1-201ENST00000358543 IGKV5-2P06315 115 aa30.9■■■□□ 2.54
ALKAL1-201ENST00000358543 NOB1Q9ULX3 412 aaKnown RBP30.9■■■□□ 2.54
ALKAL1-201ENST00000358543 KIF16BQ96L93 1317 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms