RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 PAF1Q8N7H5 531 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 PDE4BQ07343 736 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 UHRF1BP1Q6BDS2 1440 aa12.08□□□□□ -0.48
SPTAN1-201ENST00000358161 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 MYO1BO43795 1136 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 PPP4R3AQ6IN85 833 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
SPTAN1-201ENST00000358161 KIF5BP33176 963 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 C8orf76Q96K31 380 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 IFIT3O14879 490 aaKnown RBP12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 LMTK3Q96Q04 1460 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 GOLIM4O00461 696 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 TMEM266Q2M3C6 531 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 CCDC83Q8IWF9 413 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
SPTAN1-201ENST00000358161 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 CABP5Q9NP86 173 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 ERLIN2O94905 339 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 TBX22Q9Y458 520 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 YTHDC2Q9H6S0 1430 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 CRNKL1Q9BZJ0 848 aaKnown RBP12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 MYO5CQ9NQX4 1742 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 NLRP3Q96P20 1036 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 HMG20BQ9P0W2 317 aa12.05□□□□□ -0.48
SPTAN1-201ENST00000358161 ALDH1L1O75891 902 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 NOM1Q5C9Z4 860 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 XAGE3Q8WTP9 111 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 UPF3BQ9BZI7 483 aaKnown RBP12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 SCAND2PQ9GZW5 306 aaPredicted RBP12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 GOLGA8AA7E2F4 631 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 GOLGA8BA8MQT2 603 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 FEZ1Q99689 392 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
SPTAN1-201ENST00000358161 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 MFSD6Q6ZSS7 791 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 C20orf194Q5TEA3 1177 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 SPC24Q8NBT2 197 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 CCDC194A0A1B0GVG4 234 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 MAP3K11Q16584 847 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 CCDC178Q5BJE1 867 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 UTP14AQ9BVJ6 771 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 POTEJP0CG39 1038 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 TSG101Q99816 390 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 GRM8O00222 908 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 ZNF397Q8NF99 534 aaPredicted RBP12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 HDAC9Q9UKV0 1011 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 BAG4O95429 457 aaKnown RBP12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 NLRP5P59047 1200 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 COPS6Q7L5N1 327 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 KAT14Q9H8E8 782 aa12.03□□□□□ -0.48
SPTAN1-201ENST00000358161 DCAF5Q96JK2 942 aa12.02□□□□□ -0.48
SPTAN1-201ENST00000358161 MAPKBP1O60336 1514 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 RTCBQ9Y3I0 505 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 FGFR1OPO95684 399 aaKnown RBP12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 DISP1Q96F81 1524 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 SOS1Q07889 1333 aaPredicted RBP12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 GCP02774 474 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 BMP2KLQ5H9B9 411 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 TMEM67Q5HYA8 995 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 NCOA7Q8NI08 942 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 CCDC181Q5TID7 509 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 POLKQ9UBT6 870 aa12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
SPTAN1-201ENST00000358161 KIF20AO95235 890 aa12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 ZNF804AQ7Z570 1209 aa12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 SIRT1Q96EB6 747 aa12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 SCLT1Q96NL6 688 aa12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 FBLN1P23142 703 aa12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 ZNF771Q7L3S4 317 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 WDR78Q5VTH9 848 aa12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 IL15P40933 162 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
SPTAN1-201ENST00000358161 IP6K1Q92551 441 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms