RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 MRC1P22897 1456 aa26.44■■□□□ 1.82
LIMS2-202ENST00000355119 FAM43AQ8N2R8 423 aa26.44■■□□□ 1.82
LIMS2-202ENST00000355119 INTS4Q96HW7 963 aaKnown RBP26.43■■□□□ 1.82
LIMS2-202ENST00000355119 RAD50Q92878 1312 aa26.43■■□□□ 1.82
LIMS2-202ENST00000355119 AIMP1Q12904 312 aaKnown RBP26.43■■□□□ 1.82
LIMS2-202ENST00000355119 SLC39A6Q13433 755 aa26.43■■□□□ 1.82
LIMS2-202ENST00000355119 MCTP1Q6DN14 999 aa26.43■■□□□ 1.82
LIMS2-202ENST00000355119 RIC3Q7Z5B4 369 aa26.43■■□□□ 1.82
LIMS2-202ENST00000355119 DDX17Q92841 729 aaKnown RBP26.43■■□□□ 1.82
LIMS2-202ENST00000355119 SUCLG2Q96I99 432 aa26.43■■□□□ 1.82
LIMS2-202ENST00000355119 ECHDC1Q9NTX5 307 aa26.43■■□□□ 1.82
LIMS2-202ENST00000355119 NEXNQ0ZGT2 675 aa26.41■■□□□ 1.82
LIMS2-202ENST00000355119 PKP1Q13835 747 aa26.41■■□□□ 1.82
LIMS2-202ENST00000355119 NFATC2IPQ8NCF5 419 aa26.41■■□□□ 1.82
LIMS2-202ENST00000355119 DCAF5Q96JK2 942 aa26.41■■□□□ 1.82
LIMS2-202ENST00000355119 IL25Q9H293 177 aa26.41■■□□□ 1.82
LIMS2-202ENST00000355119 DDX49Q9Y6V7 483 aaKnown RBP26.41■■□□□ 1.82
LIMS2-202ENST00000355119 IFIT2P09913 472 aaKnown RBP26.41■■□□□ 1.82
LIMS2-202ENST00000355119 PKD1L3Q7Z443 1732 aa26.41■■□□□ 1.82
LIMS2-202ENST00000355119 RUFY2Q8WXA3 655 aa26.4■■□□□ 1.82
LIMS2-202ENST00000355119 KIAA1211Q6ZU35 1233 aa26.39■■□□□ 1.82
LIMS2-202ENST00000355119 LSG1Q9H089 658 aaKnown RBP26.39■■□□□ 1.82
LIMS2-202ENST00000355119 ZDHHC9Q9Y397 364 aa26.39■■□□□ 1.82
LIMS2-202ENST00000355119 CPDO75976 1380 aa26.39■■□□□ 1.82
LIMS2-202ENST00000355119 KAZALD1Q96I82 304 aa26.39■■□□□ 1.81
LIMS2-202ENST00000355119 BICC1Q9H694 974 aaKnown RBP26.39■■□□□ 1.81
LIMS2-202ENST00000355119 PA2G4Q9UQ80 394 aaKnown RBP26.39■■□□□ 1.81
LIMS2-202ENST00000355119 SPATA31A3Q5VYP0 1347 aa26.39■■□□□ 1.81
LIMS2-202ENST00000355119 SNRPA1P09661 255 aaKnown RBP26.38■■□□□ 1.81
LIMS2-202ENST00000355119 G3BP1Q13283 466 aaKnown RBP eCLIP26.38■■□□□ 1.81
LIMS2-202ENST00000355119 IGKV5-2P06315 115 aa26.38■■□□□ 1.81
LIMS2-202ENST00000355119 TTC5Q8N0Z6 440 aa26.38■■□□□ 1.81
LIMS2-202ENST00000355119 CABLES1Q8TDN4 633 aa26.38■■□□□ 1.81
LIMS2-202ENST00000355119 XAGE3Q8WTP9 111 aa26.38■■□□□ 1.81
LIMS2-202ENST00000355119 DIAPH3Q9NSV4 1193 aa26.38■■□□□ 1.81
LIMS2-202ENST00000355119 LMBRD1Q9NUN5 540 aa26.38■■□□□ 1.81
LIMS2-202ENST00000355119 ZNF496Q96IT1 587 aaPredicted RBP26.37■■□□□ 1.81
LIMS2-202ENST00000355119 METTL22Q9BUU2 404 aaPredicted RBP26.37■■□□□ 1.81
LIMS2-202ENST00000355119 PANK2Q9BZ23 570 aa26.37■■□□□ 1.81
LIMS2-202ENST00000355119 NEURL1BA8MQ27 555 aa26.36■■□□□ 1.81
LIMS2-202ENST00000355119 AACSQ86V21 672 aa26.36■■□□□ 1.81
LIMS2-202ENST00000355119 MYL6BP14649 208 aa26.36■■□□□ 1.81
LIMS2-202ENST00000355119 CHRNA2Q15822 529 aa26.36■■□□□ 1.81
LIMS2-202ENST00000355119 FMNL2Q96PY5 1086 aa26.36■■□□□ 1.81
LIMS2-202ENST00000355119 COPS6Q7L5N1 327 aa26.35■■□□□ 1.81
LIMS2-202ENST00000355119 EVI5LQ96CN4 794 aa26.35■■□□□ 1.81
LIMS2-202ENST00000355119 UPF3BQ9BZI7 483 aaKnown RBP26.35■■□□□ 1.81
LIMS2-202ENST00000355119 SNX14Q9Y5W7 946 aa26.35■■□□□ 1.81
LIMS2-202ENST00000355119 CYP27B1O15528 508 aa26.34■■□□□ 1.81
LIMS2-202ENST00000355119 GCKRQ14397 625 aa26.34■■□□□ 1.81
LIMS2-202ENST00000355119 CWC27Q6UX04 472 aaKnown RBP26.34■■□□□ 1.81
LIMS2-202ENST00000355119 GAS2L3Q86XJ1 694 aa26.34■■□□□ 1.81
LIMS2-202ENST00000355119 BRD1O95696 1058 aa26.33■■□□□ 1.81
LIMS2-202ENST00000355119 MYD88Q99836 296 aa26.33■■□□□ 1.81
LIMS2-202ENST00000355119 SASH1O94885 1247 aa26.32■■□□□ 1.8
LIMS2-202ENST00000355119 PARP4Q9UKK3 1724 aaKnown RBP26.32■■□□□ 1.8
LIMS2-202ENST00000355119 ANKRD13DQ6ZTN6 518 aa26.32■■□□□ 1.8
LIMS2-202ENST00000355119 HIP1O00291 1037 aa26.31■■□□□ 1.8
LIMS2-202ENST00000355119 CABP4P57796 275 aa26.31■■□□□ 1.8
LIMS2-202ENST00000355119 NOL8Q76FK4 1167 aaKnown RBP26.31■■□□□ 1.8
LIMS2-202ENST00000355119 LRP10Q7Z4F1 713 aa26.31■■□□□ 1.8
LIMS2-202ENST00000355119 USP16Q9Y5T5 823 aa26.3■■□□□ 1.8
LIMS2-202ENST00000355119 PRPF40AO75400 957 aaKnown RBP26.29■■□□□ 1.8
LIMS2-202ENST00000355119 ZNF445P59923 1031 aa26.29■■□□□ 1.8
LIMS2-202ENST00000355119 EAF2Q96CJ1 260 aaPredicted RBP26.29■■□□□ 1.8
LIMS2-202ENST00000355119 TTC14Q96N46 770 aa26.29■■□□□ 1.8
LIMS2-202ENST00000355119 LAMB4A4D0S4 1761 aa26.29■■□□□ 1.8
LIMS2-202ENST00000355119 COL15A1P39059 1388 aa26.28■■□□□ 1.8
LIMS2-202ENST00000355119 NCLP19338 710 aaKnown RBP26.27■■□□□ 1.8
LIMS2-202ENST00000355119 RASEFQ8IZ41 740 aa26.27■■□□□ 1.8
LIMS2-202ENST00000355119 KCNB2Q92953 911 aa26.26■■□□□ 1.79
LIMS2-202ENST00000355119 CAVIN1Q6NZI2 390 aaKnown RBP26.26■■□□□ 1.79
LIMS2-202ENST00000355119 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
LIMS2-202ENST00000355119 CCDC8Q9H0W5 538 aaPredicted RBP26.25■■□□□ 1.79
LIMS2-202ENST00000355119 COPRSQ9NQ92 184 aa26.25■■□□□ 1.79
LIMS2-202ENST00000355119 EPHA10Q5JZY3 1008 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 TM6SF1Q9BZW5 370 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 SIL1Q9H173 461 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 LIMCH1Q9UPQ0 1083 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 ARFGEF2Q9Y6D5 1785 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 GLI3P10071 1580 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 AFDNP55196 1824 aaKnown RBP26.24■■□□□ 1.79
LIMS2-202ENST00000355119 ZSCAN23Q3MJ62 389 aa26.24■■□□□ 1.79
LIMS2-202ENST00000355119 WDR33Q9C0J8 1336 aaKnown RBP26.23■■□□□ 1.79
LIMS2-202ENST00000355119 AK2P54819 239 aa26.23■■□□□ 1.79
LIMS2-202ENST00000355119 PTH1RQ03431 593 aa26.23■■□□□ 1.79
LIMS2-202ENST00000355119 FOXD4L5Q5VV16 416 aaPredicted RBP26.23■■□□□ 1.79
LIMS2-202ENST00000355119 BRINP3Q76B58 766 aa26.23■■□□□ 1.79
LIMS2-202ENST00000355119 FOXD4L4Q8WXT5 416 aaPredicted RBP26.23■■□□□ 1.79
LIMS2-202ENST00000355119 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.23■■□□□ 1.79
LIMS2-202ENST00000355119 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
LIMS2-202ENST00000355119 MBD3O95983 291 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 PLBD2Q8NHP8 589 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 GPT2Q8TD30 523 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 SNRKQ9NRH2 765 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 CCDC171Q6TFL3 1326 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 WDR17Q8IZU2 1322 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 PCDH11XQ9BZA7 1347 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 PCDH11YQ9BZA8 1340 aa26.22■■□□□ 1.79
LIMS2-202ENST00000355119 RABL6Q3YEC7 729 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms