RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 GCKRQ14397 625 aa19.02■□□□□ 0.64
MBD1-205ENST00000353909 TNPO1Q92973 898 aaKnown RBP19.02■□□□□ 0.64
MBD1-205ENST00000353909 METTL22Q9BUU2 404 aaPredicted RBP19.02■□□□□ 0.64
MBD1-205ENST00000353909 AK9Q5TCS8 1911 aa19.02■□□□□ 0.64
MBD1-205ENST00000353909 ATP5J2-PTCD1G3V325 749 aa19.01■□□□□ 0.63
MBD1-205ENST00000353909 EIF5BO60841 1220 aaKnown RBP19.01■□□□□ 0.63
MBD1-205ENST00000353909 PTCD1O75127 700 aaKnown RBP19.01■□□□□ 0.63
MBD1-205ENST00000353909 SIL1Q9H173 461 aa19.01■□□□□ 0.63
MBD1-205ENST00000353909 AOX1Q06278 1338 aa19.01■□□□□ 0.63
MBD1-205ENST00000353909 GLI3P10071 1580 aa19.01■□□□□ 0.63
MBD1-205ENST00000353909 SASH1O94885 1247 aa19.01■□□□□ 0.63
MBD1-205ENST00000353909 NEXNQ0ZGT2 675 aa19.01■□□□□ 0.63
MBD1-205ENST00000353909 PCDH11XQ9BZA7 1347 aa19■□□□□ 0.63
MBD1-205ENST00000353909 PCDH11YQ9BZA8 1340 aa19■□□□□ 0.63
MBD1-205ENST00000353909 NBPF26B4DH59 902 aa19■□□□□ 0.63
MBD1-205ENST00000353909 HSP90AB4PQ58FF6 505 aa19■□□□□ 0.63
MBD1-205ENST00000353909 NBPF14Q5TI25 921 aa19■□□□□ 0.63
MBD1-205ENST00000353909 NBPF10Q6P3W6 841 aaKnown RBP19■□□□□ 0.63
MBD1-205ENST00000353909 NBPF15Q8N660 670 aa19■□□□□ 0.63
MBD1-205ENST00000353909 IL2RBP14784 551 aa19■□□□□ 0.63
MBD1-205ENST00000353909 CLASRPQ8N2M8 674 aaKnown RBP18.99■□□□□ 0.63
MBD1-205ENST00000353909 CARD10Q9BWT7 1032 aa18.99■□□□□ 0.63
MBD1-205ENST00000353909 ABCA3Q99758 1704 aa18.98■□□□□ 0.63
MBD1-205ENST00000353909 EVA1CP58658 441 aa18.98■□□□□ 0.63
MBD1-205ENST00000353909 RAB3GAP1Q15042 981 aa18.98■□□□□ 0.63
MBD1-205ENST00000353909 A1BGP04217 495 aa18.97■□□□□ 0.63
MBD1-205ENST00000353909 NEK4P51957 841 aa18.97■□□□□ 0.63
MBD1-205ENST00000353909 EAF2Q96CJ1 260 aaPredicted RBP18.97■□□□□ 0.63
MBD1-205ENST00000353909 SSFA2P28290 1259 aa18.97■□□□□ 0.63
MBD1-205ENST00000353909 UBE3BQ7Z3V4 1068 aa18.97■□□□□ 0.63
MBD1-205ENST00000353909 AACSQ86V21 672 aa18.97■□□□□ 0.63
MBD1-205ENST00000353909 TLR7Q9NYK1 1049 aaKnown RBP18.97■□□□□ 0.63
MBD1-205ENST00000353909 PLEKHG2Q9H7P9 1386 aa18.97■□□□□ 0.63
MBD1-205ENST00000353909 TTLL7Q6ZT98 887 aa18.96■□□□□ 0.63
MBD1-205ENST00000353909 ZGPATQ8N5A5 531 aaKnown RBP18.96■□□□□ 0.63
MBD1-205ENST00000353909 CCDC8Q9H0W5 538 aaPredicted RBP18.96■□□□□ 0.63
MBD1-205ENST00000353909 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
MBD1-205ENST00000353909 PARP4Q9UKK3 1724 aaKnown RBP18.96■□□□□ 0.63
MBD1-205ENST00000353909 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
MBD1-205ENST00000353909 ST18O60284 1047 aa18.96■□□□□ 0.63
MBD1-205ENST00000353909 PKP1Q13835 747 aa18.96■□□□□ 0.63
MBD1-205ENST00000353909 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
MBD1-205ENST00000353909 USP42Q9H9J4 1324 aaKnown RBP18.95■□□□□ 0.62
MBD1-205ENST00000353909 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
MBD1-205ENST00000353909 G3BP1Q13283 466 aaKnown RBP eCLIP18.95■□□□□ 0.62
MBD1-205ENST00000353909 ECHDC1Q9NTX5 307 aa18.95■□□□□ 0.62
MBD1-205ENST00000353909 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
MBD1-205ENST00000353909 NKX1-1Q15270 411 aaPredicted RBP18.94■□□□□ 0.62
MBD1-205ENST00000353909 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
MBD1-205ENST00000353909 UPF3BQ9BZI7 483 aaKnown RBP18.94■□□□□ 0.62
MBD1-205ENST00000353909 SHANK3Q9BYB0 1731 aa18.94■□□□□ 0.62
MBD1-205ENST00000353909 ERVV-2B6SEH9 535 aa18.94■□□□□ 0.62
MBD1-205ENST00000353909 GLRX3O76003 335 aaKnown RBP18.94■□□□□ 0.62
MBD1-205ENST00000353909 TTC41PQ6P2S7 1318 aa18.94■□□□□ 0.62
MBD1-205ENST00000353909 A0A087WZG4 1122 aa18.93■□□□□ 0.62
MBD1-205ENST00000353909 SGSM2O43147 1006 aa18.93■□□□□ 0.62
MBD1-205ENST00000353909 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
MBD1-205ENST00000353909 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
MBD1-205ENST00000353909 ARFGEF2Q9Y6D5 1785 aa18.93■□□□□ 0.62
MBD1-205ENST00000353909 TRAK2O60296 914 aa18.93■□□□□ 0.62
MBD1-205ENST00000353909 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
MBD1-205ENST00000353909 KAT6BQ8WYB5 2073 aa18.92■□□□□ 0.62
MBD1-205ENST00000353909 PLBD2Q8NHP8 589 aa18.92■□□□□ 0.62
MBD1-205ENST00000353909 AFDNP55196 1824 aaKnown RBP18.92■□□□□ 0.62
MBD1-205ENST00000353909 KCPQ6ZWJ8 1503 aa18.92■□□□□ 0.62
MBD1-205ENST00000353909 ZBTB3Q9H5J0 574 aa18.91■□□□□ 0.62
MBD1-205ENST00000353909 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
MBD1-205ENST00000353909 RFX5P48382 616 aaPredicted RBP18.91■□□□□ 0.62
MBD1-205ENST00000353909 MCCP23508 829 aa18.9■□□□□ 0.62
MBD1-205ENST00000353909 CASP7P55210 303 aa18.9■□□□□ 0.62
MBD1-205ENST00000353909 PTPN12Q05209 780 aaKnown RBP18.9■□□□□ 0.62
MBD1-205ENST00000353909 TMX3Q96JJ7 454 aa18.9■□□□□ 0.62
MBD1-205ENST00000353909 LSG1Q9H089 658 aaKnown RBP18.9■□□□□ 0.62
MBD1-205ENST00000353909 LAMB4A4D0S4 1761 aa18.9■□□□□ 0.62
MBD1-205ENST00000353909 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
MBD1-205ENST00000353909 HSPA4P34932 840 aa18.9■□□□□ 0.62
MBD1-205ENST00000353909 ARXQ96QS3 562 aa18.89■□□□□ 0.61
MBD1-205ENST00000353909 ASAP1Q9ULH1 1129 aa18.89■□□□□ 0.61
MBD1-205ENST00000353909 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
MBD1-205ENST00000353909 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
MBD1-205ENST00000353909 BRPF3Q9ULD4 1205 aa18.89■□□□□ 0.61
MBD1-205ENST00000353909 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
MBD1-205ENST00000353909 ANAPC15P60006 121 aa18.88■□□□□ 0.61
MBD1-205ENST00000353909 RAD50Q92878 1312 aa18.88■□□□□ 0.61
MBD1-205ENST00000353909 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
MBD1-205ENST00000353909 DDX11L8A8MPP1 907 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 RABL6Q3YEC7 729 aaPredicted RBP18.87■□□□□ 0.61
MBD1-205ENST00000353909 DIAPH3Q9NSV4 1193 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 PTH1RQ03431 593 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 LMBR1LQ6UX01 489 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
MBD1-205ENST00000353909 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 COPRSQ9NQ92 184 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 TFCP2Q12800 502 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 PIGBQ92521 554 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 CHAMP1Q96JM3 812 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 FAM227BQ96M60 508 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 GBP4Q96PP9 640 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 TMOD3Q9NYL9 352 aa18.87■□□□□ 0.61
MBD1-205ENST00000353909 NDUFB9Q9Y6M9 179 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms