RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TTLL7Q6ZT98 887 aa28.7■■■□□ 2.18
SNX3-202ENST00000349379 ZNF652Q9Y2D9 606 aa28.7■■■□□ 2.18
SNX3-202ENST00000349379 MAP3K15Q6ZN16 1313 aa28.69■■■□□ 2.18
SNX3-202ENST00000349379 DCAF8L1A6NGE4 600 aa28.69■■■□□ 2.18
SNX3-202ENST00000349379 ERVV-1B6SEH8 477 aa28.69■■■□□ 2.18
SNX3-202ENST00000349379 BICDL1Q6ZP65 573 aa28.69■■■□□ 2.18
SNX3-202ENST00000349379 DDX21Q9NR30 783 aaKnown RBP eCLIP28.69■■■□□ 2.18
SNX3-202ENST00000349379 HLFQ16534 295 aa28.68■■■□□ 2.18
SNX3-202ENST00000349379 HDGFL1Q5TGJ6 251 aa28.68■■■□□ 2.18
SNX3-202ENST00000349379 ANXA1P04083 346 aa28.67■■■□□ 2.18
SNX3-202ENST00000349379 C8orf58Q8NAV2 365 aa28.67■■■□□ 2.18
SNX3-202ENST00000349379 NECTIN2Q92692 538 aa28.67■■■□□ 2.18
SNX3-202ENST00000349379 TSR2Q969E8 191 aaKnown RBP28.67■■■□□ 2.18
SNX3-202ENST00000349379 SALL2Q9Y467 1007 aaPredicted RBP28.67■■■□□ 2.18
SNX3-202ENST00000349379 ARFGEF1Q9Y6D6 1849 aa28.66■■■□□ 2.18
SNX3-202ENST00000349379 SETDB2Q96T68 719 aa28.66■■■□□ 2.18
SNX3-202ENST00000349379 ATP10DQ9P241 1426 aa28.66■■■□□ 2.18
SNX3-202ENST00000349379 ZNF521Q96K83 1311 aa28.66■■■□□ 2.18
SNX3-202ENST00000349379 CACNA1FO60840 1977 aa28.65■■■□□ 2.18
SNX3-202ENST00000349379 KIF6Q6ZMV9 814 aa28.65■■■□□ 2.18
SNX3-202ENST00000349379 CHPF2Q9P2E5 772 aa28.65■■■□□ 2.18
SNX3-202ENST00000349379 YBX3P16989 372 aaKnown RBP eCLIP28.64■■■□□ 2.181e-8■■□□□ 12.5
SNX3-202ENST00000349379 COL11A2P13942 1736 aaPredicted RBP28.63■■■□□ 2.17
SNX3-202ENST00000349379 GPR162Q16538 588 aa28.63■■■□□ 2.17
SNX3-202ENST00000349379 UTRNP46939 3433 aa28.62■■■□□ 2.17
SNX3-202ENST00000349379 DPEP1P16444 411 aa28.62■■■□□ 2.17
SNX3-202ENST00000349379 PRR5LQ6MZQ0 368 aa28.62■■■□□ 2.17
SNX3-202ENST00000349379 MIER1Q8N108 512 aa28.62■■■□□ 2.17
SNX3-202ENST00000349379 TSPYL6Q8N831 410 aa28.62■■■□□ 2.17
SNX3-202ENST00000349379 DBF4Q9UBU7 674 aaPredicted RBP28.62■■■□□ 2.17
SNX3-202ENST00000349379 GOLGB1Q14789 3259 aaKnown RBP28.62■■■□□ 2.17
SNX3-202ENST00000349379 FANCIQ9NVI1 1328 aa28.62■■■□□ 2.17
SNX3-202ENST00000349379 ARFGEF2Q9Y6D5 1785 aa28.61■■■□□ 2.17
SNX3-202ENST00000349379 A0A0G2JLW4 131 aa28.61■■■□□ 2.17
SNX3-202ENST00000349379 ELL2O00472 640 aaPredicted RBP28.61■■■□□ 2.17
SNX3-202ENST00000349379 KCNA3P22001 575 aa28.61■■■□□ 2.17
SNX3-202ENST00000349379 ZBTB3Q9H5J0 574 aa28.61■■■□□ 2.17
SNX3-202ENST00000349379 NIP7Q9Y221 180 aaKnown RBP eCLIP28.61■■■□□ 2.17
SNX3-202ENST00000349379 GIGYF2Q6Y7W6 1299 aaKnown RBP28.6■■■□□ 2.17
SNX3-202ENST00000349379 COPS6Q7L5N1 327 aa28.6■■■□□ 2.17
SNX3-202ENST00000349379 XAGE3Q8WTP9 111 aa28.6■■■□□ 2.17
SNX3-202ENST00000349379 SPINK5Q9NQ38 1064 aaPredicted RBP28.6■■■□□ 2.17
SNX3-202ENST00000349379 PELP1Q8IZL8 1130 aaKnown RBP28.58■■■□□ 2.17
SNX3-202ENST00000349379 CNBD1Q8NA66 436 aa28.58■■■□□ 2.17
SNX3-202ENST00000349379 HYPKQ9NX55 129 aa28.57■■■□□ 2.16
SNX3-202ENST00000349379 CHRNA5P30532 468 aa28.56■■■□□ 2.16
SNX3-202ENST00000349379 ZNF34Q8IZ26 560 aa28.56■■■□□ 2.16
SNX3-202ENST00000349379 IBTKQ9P2D0 1353 aaPredicted RBP28.56■■■□□ 2.16
SNX3-202ENST00000349379 UBN2Q6ZU65 1347 aa28.55■■■□□ 2.16
SNX3-202ENST00000349379 GRIN3BO60391 1043 aa28.55■■■□□ 2.16
SNX3-202ENST00000349379 AIMP1Q12904 312 aaKnown RBP28.55■■■□□ 2.16
SNX3-202ENST00000349379 NBPF5PQ86XG9 351 aaPredicted RBP28.55■■■□□ 2.16
SNX3-202ENST00000349379 BRIP1Q9BX63 1249 aa28.55■■■□□ 2.16
SNX3-202ENST00000349379 CHMP4AQ9BY43 222 aa28.55■■■□□ 2.16
SNX3-202ENST00000349379 TWISTNBQ3B726 338 aaPredicted RBP28.54■■■□□ 2.16
SNX3-202ENST00000349379 CCDC30Q5VVM6 783 aa28.54■■■□□ 2.16
SNX3-202ENST00000349379 CACNA1SQ13698 1873 aa28.54■■■□□ 2.16
SNX3-202ENST00000349379 TNRC6CQ9HCJ0 1690 aaKnown RBP28.54■■■□□ 2.16
SNX3-202ENST00000349379 CCDC24Q8N4L8 307 aa28.53■■■□□ 2.16
SNX3-202ENST00000349379 WWC3Q9ULE0 1092 aa28.53■■■□□ 2.16
SNX3-202ENST00000349379 ST5P78524 1137 aa28.52■■■□□ 2.16
SNX3-202ENST00000349379 GOLGA2Q08379 1002 aa28.52■■■□□ 2.16
SNX3-202ENST00000349379 TPTE2Q6XPS3 522 aa28.52■■■□□ 2.16
SNX3-202ENST00000349379 MYH16Q9H6N6 1097 aa28.52■■■□□ 2.16
SNX3-202ENST00000349379 PIM2Q9P1W9 311 aa28.52■■■□□ 2.16
SNX3-202ENST00000349379 PDZRN3Q9UPQ7 1066 aa28.52■■■□□ 2.16
SNX3-202ENST00000349379 GPTP24298 496 aa28.51■■■□□ 2.15
SNX3-202ENST00000349379 PLBD2Q8NHP8 589 aa28.51■■■□□ 2.15
SNX3-202ENST00000349379 PDE6BP35913 854 aa28.5■■■□□ 2.15
SNX3-202ENST00000349379 HSP90AB3PQ58FF7 597 aa28.5■■■□□ 2.15
SNX3-202ENST00000349379 RIC1Q4ADV7 1423 aa28.5■■■□□ 2.15
SNX3-202ENST00000349379 EXOSC9Q06265 439 aaKnown RBP28.49■■■□□ 2.15
SNX3-202ENST00000349379 PARP10Q53GL7 1025 aa28.49■■■□□ 2.15
SNX3-202ENST00000349379 ANKRD13DQ6ZTN6 518 aa28.49■■■□□ 2.15
SNX3-202ENST00000349379 C2CD5Q86YS7 1000 aa28.49■■■□□ 2.15
SNX3-202ENST00000349379 NYXQ9GZU5 481 aa28.49■■■□□ 2.15
SNX3-202ENST00000349379 PHAXQ9H814 394 aaKnown RBP28.49■■■□□ 2.15
SNX3-202ENST00000349379 VAMP4O75379 141 aa28.48■■■□□ 2.15
SNX3-202ENST00000349379 TCIRG1Q13488 830 aa28.48■■■□□ 2.15
SNX3-202ENST00000349379 SUSD4Q5VX71 490 aa28.48■■■□□ 2.15
SNX3-202ENST00000349379 BCS1LQ9Y276 419 aa28.48■■■□□ 2.15
SNX3-202ENST00000349379 KLRG2A4D1S0 409 aaPredicted RBP28.47■■■□□ 2.15
SNX3-202ENST00000349379 H0YIN7 160 aa28.47■■■□□ 2.15
SNX3-202ENST00000349379 NPHP1O15259 732 aa28.47■■■□□ 2.15
SNX3-202ENST00000349379 NTSR2O95665 410 aa28.47■■■□□ 2.15
SNX3-202ENST00000349379 ABCC12Q96J65 1359 aa28.47■■■□□ 2.15
SNX3-202ENST00000349379 LAMB2P55268 1798 aa28.47■■■□□ 2.15
SNX3-202ENST00000349379 FAM177BA6PVY3 158 aa28.46■■■□□ 2.15
SNX3-202ENST00000349379 DALRD3Q5D0E6 543 aaKnown RBP28.46■■■□□ 2.15
SNX3-202ENST00000349379 SLX4Q8IY92 1834 aa28.46■■■□□ 2.15
SNX3-202ENST00000349379 SRGNP10124 158 aa28.44■■■□□ 2.14
SNX3-202ENST00000349379 PPP1R42Q7Z4L9 355 aa28.44■■■□□ 2.14
SNX3-202ENST00000349379 NLRP10Q86W26 655 aa28.44■■■□□ 2.14
SNX3-202ENST00000349379 NUTM1Q86Y26 1132 aa28.44■■■□□ 2.14
SNX3-202ENST00000349379 SBF1O95248 1867 aa28.44■■■□□ 2.14
SNX3-202ENST00000349379 DDX60Q8IY21 1712 aaKnown RBP28.43■■■□□ 2.14
SNX3-202ENST00000349379 ISCA1Q9BUE6 129 aa28.43■■■□□ 2.14
SNX3-202ENST00000349379 STK31Q9BXU1 1019 aa28.43■■■□□ 2.14
SNX3-202ENST00000349379 RNF123Q5XPI4 1314 aa28.43■■■□□ 2.14
SNX3-202ENST00000349379 E9PSI1 815 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms