RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 HIP1O00291 1037 aa18.69■□□□□ 0.58
TNFSF13-202ENST00000349228 PROSER2Q86WR7 435 aaPredicted RBP18.69■□□□□ 0.58
TNFSF13-202ENST00000349228 ESPNB1AK53 854 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 GRM8O00222 908 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 ANXA1P04083 346 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 LMOD2Q6P5Q4 547 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 DIAPH3Q9NSV4 1193 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 SNX14Q9Y5W7 946 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 CRYBG1Q9Y4K1 1723 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
TNFSF13-202ENST00000349228 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 ERBB3P21860 1342 aa18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 ABCC6O95255 1503 aa18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 AXIN2Q9Y2T1 843 aa18.67■□□□□ 0.58
TNFSF13-202ENST00000349228 GPT2Q8TD30 523 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 SYAP1Q96A49 352 aaPredicted RBP18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 UPF3BQ9BZI7 483 aaKnown RBP18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 TM6SF1Q9BZW5 370 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 LIMCH1Q9UPQ0 1083 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 SIPA1L3O60292 1781 aaPredicted RBP18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 MAP4K4O95819 1239 aaPredicted RBP18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 G3BP1Q13283 466 aaKnown RBP eCLIP18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 PROSER3Q2NL68 480 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 KCNB2Q92953 911 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 TTC14Q96N46 770 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 IL25Q9H293 177 aa18.66■□□□□ 0.58
TNFSF13-202ENST00000349228 TATP17735 454 aaPredicted RBP18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 XPCQ01831 940 aaPredicted RBP18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 HS1BP3Q53T59 392 aa18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
TNFSF13-202ENST00000349228 PDIA6Q15084 440 aa18.64■□□□□ 0.57
TNFSF13-202ENST00000349228 TAF7LQ5H9L4 462 aa18.64■□□□□ 0.57
TNFSF13-202ENST00000349228 LRSAM1Q6UWE0 723 aa18.64■□□□□ 0.57
TNFSF13-202ENST00000349228 CWC27Q6UX04 472 aaKnown RBP18.64■□□□□ 0.57
TNFSF13-202ENST00000349228 ZSCAN31Q96LW9 406 aaPredicted RBP18.64■□□□□ 0.57
TNFSF13-202ENST00000349228 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
TNFSF13-202ENST00000349228 CWF19L2Q2TBE0 894 aaKnown RBP18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 RIC3Q7Z5B4 369 aa18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 SUCLG2Q96I99 432 aa18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 AACSQ86V21 672 aa18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 SNRKQ9NRH2 765 aa18.62■□□□□ 0.57
TNFSF13-202ENST00000349228 PHF14O94880 888 aa18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 PHKG2P15735 406 aa18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 SH2B1Q9NRF2 756 aaPredicted RBP18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 ATP6V1DQ9Y5K8 247 aa18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 NOL8Q76FK4 1167 aaKnown RBP18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 TMEM87AQ8NBN3 555 aa18.61■□□□□ 0.57
TNFSF13-202ENST00000349228 DCCP43146 1447 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 ZKSCAN1P17029 563 aaPredicted RBP18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 AK2P54819 239 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 RASEFQ8IZ41 740 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 BICC1Q9H694 974 aaKnown RBP18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 ZSWIM6Q9HCJ5 1215 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 TMEM63CQ9P1W3 806 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 ALS2Q96Q42 1657 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 COL15A1P39059 1388 aa18.6■□□□□ 0.57
TNFSF13-202ENST00000349228 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 ATF3P18847 181 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 PRIM1P49642 420 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 PA2G4Q9UQ80 394 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 NEURL1BA8MQ27 555 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 SASH1O94885 1247 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 DCAF5Q96JK2 942 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 RBSNQ9H1K0 784 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 CYP46A1Q9Y6A2 500 aa18.59■□□□□ 0.57
TNFSF13-202ENST00000349228 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 AIMP1Q12904 312 aaKnown RBP18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 GCKRQ14397 625 aa18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 NECTIN1Q15223 517 aa18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 FOXD4L5Q5VV16 416 aaPredicted RBP18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 RUFY3Q7L099 469 aa18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 FOXD4L4Q8WXT5 416 aaPredicted RBP18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 SMC3Q9UQE7 1217 aa18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.56
TNFSF13-202ENST00000349228 ZSCAN22P10073 491 aaPredicted RBP18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 CASTP20810 708 aaKnown RBP18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 PSMA5P28066 241 aa18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 ZSCAN30Q86W11 494 aa18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 PDLIM2Q96JY6 352 aa18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 PDRG1Q9NUG6 133 aa18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
TNFSF13-202ENST00000349228 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms