RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CRBNQ96SW2 442 aa24.16■■□□□ 1.46
CHMP4A-201ENST00000347519 MAP3K2Q9Y2U5 619 aa24.16■■□□□ 1.46
CHMP4A-201ENST00000347519 ZNF827Q17R98 1081 aa24.16■■□□□ 1.46
CHMP4A-201ENST00000347519 ANKRD13DQ6ZTN6 518 aa24.16■■□□□ 1.46
CHMP4A-201ENST00000347519 COG6Q9Y2V7 657 aa24.16■■□□□ 1.46
CHMP4A-201ENST00000347519 COL15A1P39059 1388 aa24.15■■□□□ 1.46
CHMP4A-201ENST00000347519 FTSJ3Q8IY81 847 aaKnown RBP24.15■■□□□ 1.46
CHMP4A-201ENST00000347519 DNAAF4Q8WXU2 420 aa24.15■■□□□ 1.46
CHMP4A-201ENST00000347519 AK7Q96M32 723 aa24.15■■□□□ 1.46
CHMP4A-201ENST00000347519 ZBTB3Q9H5J0 574 aa24.15■■□□□ 1.46
CHMP4A-201ENST00000347519 TBC1D2BQ9UPU7 963 aa24.15■■□□□ 1.46
CHMP4A-201ENST00000347519 C4AP0C0L4 1744 aa24.14■■□□□ 1.45
CHMP4A-201ENST00000347519 DDX58O95786 925 aaKnown RBP24.14■■□□□ 1.45
CHMP4A-201ENST00000347519 SLC4A10Q6U841 1118 aa24.14■■□□□ 1.45
CHMP4A-201ENST00000347519 RIC3Q7Z5B4 369 aa24.14■■□□□ 1.45
CHMP4A-201ENST00000347519 PLBD2Q8NHP8 589 aa24.14■■□□□ 1.45
CHMP4A-201ENST00000347519 AKT1S1Q96B36 256 aa24.14■■□□□ 1.45
CHMP4A-201ENST00000347519 DZIP3Q86Y13 1208 aaKnown RBP24.13■■□□□ 1.45
CHMP4A-201ENST00000347519 ARXQ96QS3 562 aa24.13■■□□□ 1.45
CHMP4A-201ENST00000347519 BCORQ6W2J9 1755 aa24.13■■□□□ 1.45
CHMP4A-201ENST00000347519 NUP98P52948 1817 aa24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 MS4A1P11836 297 aa24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 FKBP8Q14318 412 aa24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 HLFQ16534 295 aa24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 MAP3K15Q6ZN16 1313 aa24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 EXOC6Q8TAG9 804 aa24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 RTCBQ9Y3I0 505 aaKnown RBP24.12■■□□□ 1.45
CHMP4A-201ENST00000347519 PXDNLA1KZ92 1463 aa24.11■■□□□ 1.45
CHMP4A-201ENST00000347519 INTS3Q68E01 1043 aaKnown RBP24.11■■□□□ 1.45
CHMP4A-201ENST00000347519 KIF6Q6ZMV9 814 aa24.11■■□□□ 1.45
CHMP4A-201ENST00000347519 ANO8Q9HCE9 1232 aaPredicted RBP24.11■■□□□ 1.45
CHMP4A-201ENST00000347519 PHF14O94880 888 aa24.1■■□□□ 1.45
CHMP4A-201ENST00000347519 CAMTA2O94983 1202 aa24.1■■□□□ 1.45
CHMP4A-201ENST00000347519 MVPQ14764 893 aaKnown RBP24.1■■□□□ 1.45
CHMP4A-201ENST00000347519 BEND3Q5T5X7 828 aa24.1■■□□□ 1.45
CHMP4A-201ENST00000347519 ARHGEF1Q92888 912 aaKnown RBP24.1■■□□□ 1.45
CHMP4A-201ENST00000347519 METTL22Q9BUU2 404 aaPredicted RBP24.1■■□□□ 1.45
CHMP4A-201ENST00000347519 NEFLP07196 543 aa24.09■■□□□ 1.45
CHMP4A-201ENST00000347519 ITPRIPQ8IWB1 547 aa24.09■■□□□ 1.45
CHMP4A-201ENST00000347519 MYD88Q99836 296 aa24.09■■□□□ 1.45
CHMP4A-201ENST00000347519 SCN7AQ01118 1682 aa24.09■■□□□ 1.45
CHMP4A-201ENST00000347519 AFDNP55196 1824 aaKnown RBP24.09■■□□□ 1.45
CHMP4A-201ENST00000347519 ANKRD36CQ5JPF3 1778 aa24.09■■□□□ 1.45
CHMP4A-201ENST00000347519 IGKV5-2P06315 115 aa24.08■■□□□ 1.45
CHMP4A-201ENST00000347519 SRP68Q9UHB9 627 aaKnown RBP24.08■■□□□ 1.45
CHMP4A-201ENST00000347519 ATP10DQ9P241 1426 aa24.08■■□□□ 1.44
CHMP4A-201ENST00000347519 A0A087WZG4 1122 aa24.07■■□□□ 1.44
CHMP4A-201ENST00000347519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.07■■□□□ 1.44
CHMP4A-201ENST00000347519 NPM2Q86SE8 214 aaKnown RBP24.07■■□□□ 1.44
CHMP4A-201ENST00000347519 ERVV-1B6SEH8 477 aa24.06■■□□□ 1.44
CHMP4A-201ENST00000347519 ATP5J2-PTCD1G3V325 749 aa24.06■■□□□ 1.44
CHMP4A-201ENST00000347519 CCT4P50991 539 aaKnown RBP24.06■■□□□ 1.44
CHMP4A-201ENST00000347519 CWF19L2Q2TBE0 894 aaKnown RBP24.06■■□□□ 1.44
CHMP4A-201ENST00000347519 BCL2L12Q9HB09 334 aa24.06■■□□□ 1.44
CHMP4A-201ENST00000347519 TRAPPC3LQ5T215 181 aa24.05■■□□□ 1.44
CHMP4A-201ENST00000347519 GIGYF2Q6Y7W6 1299 aaKnown RBP24.05■■□□□ 1.44
CHMP4A-201ENST00000347519 SSFA2P28290 1259 aa24.04■■□□□ 1.44
CHMP4A-201ENST00000347519 SRCIN1Q9C0H9 1055 aa24.04■■□□□ 1.44
CHMP4A-201ENST00000347519 TFCP2L1Q9NZI6 479 aa24.04■■□□□ 1.44
CHMP4A-201ENST00000347519 NARFQ9UHQ1 456 aa24.04■■□□□ 1.44
CHMP4A-201ENST00000347519 HMGB2P26583 209 aaKnown RBP24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 TCIRG1Q13488 830 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 USPL1Q5W0Q7 1092 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 LINS1Q8NG48 757 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 ISCA1Q9BUE6 129 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 QSER1Q2KHR3 1735 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 NEURL1BA8MQ27 555 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 ZBTB7BO15156 539 aaPredicted RBP24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 ADRA2BP18089 450 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 SLC15A2Q16348 729 aa24.03■■□□□ 1.44
CHMP4A-201ENST00000347519 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
CHMP4A-201ENST00000347519 USP42Q9H9J4 1324 aaKnown RBP24.02■■□□□ 1.44
CHMP4A-201ENST00000347519 COL23A1Q86Y22 540 aaPredicted RBP24.02■■□□□ 1.44
CHMP4A-201ENST00000347519 MEIS3Q99687 375 aa24.02■■□□□ 1.44
CHMP4A-201ENST00000347519 ALDH1L1O75891 902 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 GPTP24298 496 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 RFC4P35249 363 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 NEXNQ0ZGT2 675 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 STK32BQ9NY57 414 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 DDX19BQ9UMR2 479 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
CHMP4A-201ENST00000347519 ZNF34Q8IZ26 560 aa24■■□□□ 1.43
CHMP4A-201ENST00000347519 USP44Q9H0E7 712 aa24■■□□□ 1.43
CHMP4A-201ENST00000347519 ZPR1O75312 459 aa23.99■■□□□ 1.43
CHMP4A-201ENST00000347519 UBN2Q6ZU65 1347 aa23.98■■□□□ 1.43
CHMP4A-201ENST00000347519 GCKRQ14397 625 aa23.98■■□□□ 1.43
CHMP4A-201ENST00000347519 JARID2Q92833 1246 aaPredicted RBP23.98■■□□□ 1.43
CHMP4A-201ENST00000347519 ZBTB40Q9NUA8 1239 aa23.98■■□□□ 1.43
CHMP4A-201ENST00000347519 TRIM28Q13263 835 aaKnown RBP23.97■■□□□ 1.43
CHMP4A-201ENST00000347519 HSP90AB3PQ58FF7 597 aa23.97■■□□□ 1.43
CHMP4A-201ENST00000347519 NLRP10Q86W26 655 aa23.97■■□□□ 1.43
CHMP4A-201ENST00000347519 NBPF7P0C2Y1 421 aaPredicted RBP23.96■■□□□ 1.43
CHMP4A-201ENST00000347519 GYS1P13807 737 aa23.96■■□□□ 1.43
CHMP4A-201ENST00000347519 TBC1D9BQ66K14 1250 aa23.96■■□□□ 1.43
CHMP4A-201ENST00000347519 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
CHMP4A-201ENST00000347519 C1orf115Q9H7X2 142 aa23.96■■□□□ 1.43
CHMP4A-201ENST00000347519 CCDC191Q8NCU4 936 aa23.95■■□□□ 1.42
CHMP4A-201ENST00000347519 CWC25Q9NXE8 425 aaPredicted RBP23.95■■□□□ 1.42
CHMP4A-201ENST00000347519 ZNF652Q9Y2D9 606 aa23.95■■□□□ 1.42
CHMP4A-201ENST00000347519 IBTKQ9P2D0 1353 aaPredicted RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms