RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 DNAJC21Q5F1R6 531 aaKnown RBP8.92□□□□□ -0.98
LIN28B-201ENST00000345080 NPC1L1Q9UHC9 1359 aa8.92□□□□□ -0.98
LIN28B-201ENST00000345080 ANKRD18BA2A2Z9 1011 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 EBAG9O00559 213 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 PEX19P40855 299 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 RIPK4P57078 832 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 AKAP17AQ02040 695 aaKnown RBP8.91□□□□□ -0.98
LIN28B-201ENST00000345080 SNW1Q13573 536 aaKnown RBP8.91□□□□□ -0.98
LIN28B-201ENST00000345080 HDAC9Q9UKV0 1011 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 ADGRL2O95490 1459 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 ZKSCAN1P17029 563 aaPredicted RBP8.91□□□□□ -0.98
LIN28B-201ENST00000345080 GCKP35557 465 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 B4GALNT4Q76KP1 1039 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 CEP57L1Q8IYX8 460 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 SECISBP2LQ93073 1101 aaKnown RBP8.91□□□□□ -0.98
LIN28B-201ENST00000345080 WDR62O43379 1518 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 ASXL1Q8IXJ9 1541 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 IL16Q14005 1332 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 SLC3A2P08195 630 aaKnown RBP8.91□□□□□ -0.98
LIN28B-201ENST00000345080 CAPN2P17655 700 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 KRT85P78386 507 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 TMCO4Q5TGY1 634 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 ATF7IPQ6VMQ6 1270 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 C16orf45Q96MC5 204 aaPredicted RBP8.91□□□□□ -0.98
LIN28B-201ENST00000345080 AFAP1Q8N556 730 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 USP21Q9UK80 565 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 MRFAP1Q9Y605 127 aa8.91□□□□□ -0.98
LIN28B-201ENST00000345080 ZKSCAN8Q15776 578 aaPredicted RBP8.9□□□□□ -0.98
LIN28B-201ENST00000345080 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.9□□□□□ -0.98
LIN28B-201ENST00000345080 RAPGEF6Q8TEU7 1601 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 RFC4P35249 363 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 TUBB2AQ13885 445 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 DUSP27Q5VZP5 1158 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 GAS2L2Q8NHY3 880 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 MRFAP1L1Q96HT8 127 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 TUBB2BQ9BVA1 445 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 KINO60870 393 aaKnown RBP8.9□□□□□ -0.98
LIN28B-201ENST00000345080 HSPA4P34932 840 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 PIP4K2AP48426 406 aaPredicted RBP8.9□□□□□ -0.98
LIN28B-201ENST00000345080 DPY19L2Q6NUT2 758 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 CCDC83Q8IWF9 413 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 SRCIN1Q9C0H9 1055 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 DACH1Q9UI36 760 aa8.9□□□□□ -0.98
LIN28B-201ENST00000345080 SFPQP23246 707 aaKnown RBP eCLIP8.9□□□□□ -0.99
LIN28B-201ENST00000345080 MCTP2Q6DN12 878 aa8.9□□□□□ -0.99
LIN28B-201ENST00000345080 EFCAB13Q8IY85 973 aa8.9□□□□□ -0.99
LIN28B-201ENST00000345080 CCDC148Q8NFR7 591 aa8.9□□□□□ -0.99
LIN28B-201ENST00000345080 JDP2Q8WYK2 163 aa8.9□□□□□ -0.99
LIN28B-201ENST00000345080 RRP7AQ9Y3A4 280 aaKnown RBP8.9□□□□□ -0.99
LIN28B-201ENST00000345080 RTEL1-TNFRSF6BF6WH68 1400 aa8.9□□□□□ -0.99
LIN28B-201ENST00000345080 ZFYVE27Q5T4F4 411 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 CFAP57Q96MR6 1250 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 TEX13AQ9BXU3 409 aaPredicted RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 ARHGAP25P42331 645 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 IRX5P78411 483 aaPredicted RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.89□□□□□ -0.991e-12■■■■■ 70.5
LIN28B-201ENST00000345080 DDX19AQ9NUU7 478 aaKnown RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 RBM27Q9P2N5 1060 aaKnown RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 SAMD9Q5K651 1589 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 HIP1O00291 1037 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 RIOK3O14730 519 aaKnown RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 ZSCAN26Q16670 478 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 CHD1LQ86WJ1 897 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 ZSCAN31Q96LW9 406 aaPredicted RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 CCDC113Q9H0I3 377 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 JRKLQ9Y4A0 524 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 RAD50Q92878 1312 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 BLMP54132 1417 aaPredicted RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 YEATS2Q9ULM3 1422 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 HSPA2P54652 639 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 KRT28Q7Z3Y7 464 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 ZNF396Q96N95 335 aaPredicted RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 PUS7Q96PZ0 661 aaKnown RBP8.89□□□□□ -0.99
LIN28B-201ENST00000345080 CCDC87Q9NVE4 849 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 ELP1O95163 1332 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 ADGBQ8N7X0 1667 aa8.89□□□□□ -0.99
LIN28B-201ENST00000345080 EIF4G3O43432 1585 aaKnown RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 ERC2O15083 957 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 RFX1P22670 979 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 IRX1P78414 480 aaPredicted RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 CCDC27Q2M243 656 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 SLF2Q8IX21 1173 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 NAP1L3Q99457 506 aaPredicted RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 FEZ2Q9UHY8 353 aaPredicted RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 LNPKQ9C0E8 428 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 TFCP2L1Q9NZI6 479 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 ZNF608Q9ULD9 1512 aaPredicted RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 SSBP05455 408 aaKnown RBP eCLIP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 GNAI3P08754 354 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 PSMA5P28066 241 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 FOSBP53539 338 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 UBE2HP62256 183 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 GRM1Q13255 1194 aa8.88□□□□□ -0.99
LIN28B-201ENST00000345080 HDAC1Q13547 482 aaPredicted RBP8.88□□□□□ -0.99
LIN28B-201ENST00000345080 ZNF518AQ6AHZ1 1483 aa8.87□□□□□ -0.99
LIN28B-201ENST00000345080 ERLIN2O94905 339 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms