RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 TPTE2Q6XPS3 522 aa26.21■■□□□ 1.79
CEACAM3-201ENST00000344550 NPHP1O15259 732 aa26.2■■□□□ 1.78
CEACAM3-201ENST00000344550 GPBP1L1Q9HC44 474 aaPredicted RBP26.2■■□□□ 1.78
CEACAM3-201ENST00000344550 RRP7AQ9Y3A4 280 aaKnown RBP26.2■■□□□ 1.78
CEACAM3-201ENST00000344550 CALD1Q05682 793 aaKnown RBP26.19■■□□□ 1.78
CEACAM3-201ENST00000344550 NEUROD2Q15784 382 aa26.19■■□□□ 1.78
CEACAM3-201ENST00000344550 KIF6Q6ZMV9 814 aa26.19■■□□□ 1.78
CEACAM3-201ENST00000344550 NBPF5PQ86XG9 351 aaPredicted RBP26.19■■□□□ 1.78
CEACAM3-201ENST00000344550 MAP3K15Q6ZN16 1313 aa26.18■■□□□ 1.78
CEACAM3-201ENST00000344550 NIP7Q9Y221 180 aaKnown RBP eCLIP26.18■■□□□ 1.78
CEACAM3-201ENST00000344550 HOXB7P09629 217 aa26.17■■□□□ 1.78
CEACAM3-201ENST00000344550 STYK1Q6J9G0 422 aa26.17■■□□□ 1.78
CEACAM3-201ENST00000344550 CFAP44Q96MT7 982 aa26.17■■□□□ 1.78
CEACAM3-201ENST00000344550 C1QTNF8P60827 252 aa26.16■■□□□ 1.78
CEACAM3-201ENST00000344550 CNKSR1Q969H4 720 aa26.16■■□□□ 1.78
CEACAM3-201ENST00000344550 KLRG2A4D1S0 409 aaPredicted RBP26.15■■□□□ 1.78
CEACAM3-201ENST00000344550 NYXQ9GZU5 481 aa26.15■■□□□ 1.78
CEACAM3-201ENST00000344550 ZC3H4Q9UPT8 1303 aaKnown RBP26.14■■□□□ 1.78
CEACAM3-201ENST00000344550 SRGNP10124 158 aa26.14■■□□□ 1.78
CEACAM3-201ENST00000344550 HLFQ16534 295 aa26.14■■□□□ 1.78
CEACAM3-201ENST00000344550 ANKRD31Q8N7Z5 1873 aa26.14■■□□□ 1.78
CEACAM3-201ENST00000344550 IBTKQ9P2D0 1353 aaPredicted RBP26.13■■□□□ 1.77
CEACAM3-201ENST00000344550 MYL6BP14649 208 aa26.13■■□□□ 1.77
CEACAM3-201ENST00000344550 MASTLQ96GX5 879 aa26.13■■□□□ 1.77
CEACAM3-201ENST00000344550 APAF1O14727 1248 aa26.12■■□□□ 1.77
CEACAM3-201ENST00000344550 PDIA6Q15084 440 aa26.12■■□□□ 1.77
CEACAM3-201ENST00000344550 SOGA3Q5TF21 947 aa26.12■■□□□ 1.77
CEACAM3-201ENST00000344550 C9orf131Q5VYM1 1079 aa26.12■■□□□ 1.77
CEACAM3-201ENST00000344550 LRP10Q7Z4F1 713 aa26.12■■□□□ 1.77
CEACAM3-201ENST00000344550 ZNF622Q969S3 477 aaKnown RBP eCLIP26.12■■□□□ 1.77
CEACAM3-201ENST00000344550 ANP32CO43423 234 aa26.11■■□□□ 1.77
CEACAM3-201ENST00000344550 NCBP3Q53F19 620 aaKnown RBP26.11■■□□□ 1.77
CEACAM3-201ENST00000344550 GIGYF2Q6Y7W6 1299 aaKnown RBP26.11■■□□□ 1.77
CEACAM3-201ENST00000344550 TTLL7Q6ZT98 887 aa26.11■■□□□ 1.77
CEACAM3-201ENST00000344550 EIF2S2P20042 333 aaKnown RBP26.1■■□□□ 1.77
CEACAM3-201ENST00000344550 NGEFQ8N5V2 710 aa26.1■■□□□ 1.77
CEACAM3-201ENST00000344550 DDX21Q9NR30 783 aaKnown RBP eCLIP26.1■■□□□ 1.77
CEACAM3-201ENST00000344550 IFT57Q9NWB7 429 aa26.1■■□□□ 1.77
CEACAM3-201ENST00000344550 ZNF853P0CG23 659 aa26.09■■□□□ 1.77
CEACAM3-201ENST00000344550 NPR1P16066 1061 aa26.09■■□□□ 1.77
CEACAM3-201ENST00000344550 LMNB1P20700 586 aa26.09■■□□□ 1.77
CEACAM3-201ENST00000344550 CHMP4AQ9BY43 222 aa26.09■■□□□ 1.77
CEACAM3-201ENST00000344550 GTF2E1P29083 439 aaPredicted RBP26.08■■□□□ 1.77
CEACAM3-201ENST00000344550 GNAI1P63096 354 aa26.08■■□□□ 1.77
CEACAM3-201ENST00000344550 PARP10Q53GL7 1025 aa26.08■■□□□ 1.77
CEACAM3-201ENST00000344550 ZNF34Q8IZ26 560 aa26.08■■□□□ 1.77
CEACAM3-201ENST00000344550 LAS1LQ9Y4W2 734 aaKnown RBP26.08■■□□□ 1.77
CEACAM3-201ENST00000344550 RIC1Q4ADV7 1423 aa26.07■■□□□ 1.76
CEACAM3-201ENST00000344550 CCDC24Q8N4L8 307 aa26.07■■□□□ 1.76
CEACAM3-201ENST00000344550 RNF181Q9P0P0 153 aa26.07■■□□□ 1.76
CEACAM3-201ENST00000344550 NUP98P52948 1817 aa26.07■■□□□ 1.76
CEACAM3-201ENST00000344550 CCDC27Q2M243 656 aa26.06■■□□□ 1.76
CEACAM3-201ENST00000344550 HSP90AB3PQ58FF7 597 aa26.06■■□□□ 1.76
CEACAM3-201ENST00000344550 ZBTB3Q9H5J0 574 aa26.06■■□□□ 1.76
CEACAM3-201ENST00000344550 LTBP3Q9NS15 1303 aa26.06■■□□□ 1.76
CEACAM3-201ENST00000344550 PPP1R42Q7Z4L9 355 aa26.05■■□□□ 1.76
CEACAM3-201ENST00000344550 RNF123Q5XPI4 1314 aa26.05■■□□□ 1.76
CEACAM3-201ENST00000344550 KDM2BQ8NHM5 1336 aa26.05■■□□□ 1.76
CEACAM3-201ENST00000344550 COL11A2P13942 1736 aaPredicted RBP26.05■■□□□ 1.76
CEACAM3-201ENST00000344550 SBF1O95248 1867 aa26.04■■□□□ 1.76
CEACAM3-201ENST00000344550 ALDH1B1P30837 517 aa26.04■■□□□ 1.76
CEACAM3-201ENST00000344550 PRPF40BQ6NWY9 871 aaKnown RBP26.04■■□□□ 1.76
CEACAM3-201ENST00000344550 ZNF526Q8TF50 670 aaPredicted RBP26.04■■□□□ 1.76
CEACAM3-201ENST00000344550 DBF4Q9UBU7 674 aaPredicted RBP26.04■■□□□ 1.76
CEACAM3-201ENST00000344550 CRY2Q49AN0 593 aa26.03■■□□□ 1.76
CEACAM3-201ENST00000344550 HDGFL1Q5TGJ6 251 aa26.03■■□□□ 1.76
CEACAM3-201ENST00000344550 MBIPQ9NS73 344 aa26.03■■□□□ 1.76
CEACAM3-201ENST00000344550 NFKBIEO00221 500 aa26.02■■□□□ 1.76
CEACAM3-201ENST00000344550 C21orf2O43822 256 aa26.02■■□□□ 1.76
CEACAM3-201ENST00000344550 PROSER3Q2NL68 480 aa26.02■■□□□ 1.76
CEACAM3-201ENST00000344550 COPS6Q7L5N1 327 aa26.02■■□□□ 1.76
CEACAM3-201ENST00000344550 KIF3CO14782 793 aa26.01■■□□□ 1.75
CEACAM3-201ENST00000344550 DUSP27Q5VZP5 1158 aa26.01■■□□□ 1.75
CEACAM3-201ENST00000344550 UBN2Q6ZU65 1347 aa26.01■■□□□ 1.75
CEACAM3-201ENST00000344550 C7orf43Q8WVR3 580 aa26.01■■□□□ 1.75
CEACAM3-201ENST00000344550 HYPKQ9NX55 129 aa26.01■■□□□ 1.75
CEACAM3-201ENST00000344550 ARFGEF2Q9Y6D5 1785 aa26.01■■□□□ 1.75
CEACAM3-201ENST00000344550 CCDC184Q52MB2 194 aa26■■□□□ 1.75
CEACAM3-201ENST00000344550 MRS2Q9HD23 443 aa26■■□□□ 1.75
CEACAM3-201ENST00000344550 FAM177BA6PVY3 158 aa25.99■■□□□ 1.75
CEACAM3-201ENST00000344550 GPTP24298 496 aa25.99■■□□□ 1.75
CEACAM3-201ENST00000344550 RASSF7Q02833 373 aa25.99■■□□□ 1.75
CEACAM3-201ENST00000344550 KRT24Q2M2I5 525 aa25.99■■□□□ 1.75
CEACAM3-201ENST00000344550 SUSD4Q5VX71 490 aa25.99■■□□□ 1.75
CEACAM3-201ENST00000344550 XAGE3Q8WTP9 111 aa25.99■■□□□ 1.75
CEACAM3-201ENST00000344550 NTSR2O95665 410 aa25.98■■□□□ 1.75
CEACAM3-201ENST00000344550 HOXA10P31260 410 aaPredicted RBP25.98■■□□□ 1.75
CEACAM3-201ENST00000344550 GRIPAP1Q4V328 841 aa25.98■■□□□ 1.75
CEACAM3-201ENST00000344550 SLC10A5Q5PT55 438 aa25.98■■□□□ 1.75
CEACAM3-201ENST00000344550 TAOK3Q9H2K8 898 aa25.98■■□□□ 1.75
CEACAM3-201ENST00000344550 CHPF2Q9P2E5 772 aa25.98■■□□□ 1.75
CEACAM3-201ENST00000344550 TCIRG1Q13488 830 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 ERFEQ4G0M1 354 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 CCDC93Q567U6 631 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 CC2D2BQ6DHV5 1058 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 PLBD2Q8NHP8 589 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 UTP14AQ9BVJ6 771 aaKnown RBP25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 FER1L6Q2WGJ9 1857 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 SLX4Q8IY92 1834 aa25.97■■□□□ 1.75
CEACAM3-201ENST00000344550 TOMM70O94826 608 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms