RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 BARGINQ6ZT62 677 aa16.89■□□□□ 0.29
CDC42-202ENST00000344548 ANP32AP39687 249 aaKnown RBP16.88■□□□□ 0.29
CDC42-202ENST00000344548 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
CDC42-202ENST00000344548 GCKRQ14397 625 aa16.87■□□□□ 0.29
CDC42-202ENST00000344548 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
CDC42-202ENST00000344548 UTYO14607 1347 aa16.87■□□□□ 0.29
CDC42-202ENST00000344548 IBTKQ9P2D0 1353 aaPredicted RBP16.87■□□□□ 0.29
CDC42-202ENST00000344548 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
CDC42-202ENST00000344548 EPHA10Q5JZY3 1008 aa16.87■□□□□ 0.29
CDC42-202ENST00000344548 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
CDC42-202ENST00000344548 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
CDC42-202ENST00000344548 A0A0G2JS52 829 aa16.86■□□□□ 0.29
CDC42-202ENST00000344548 KCNQ2O43526 872 aa16.86■□□□□ 0.29
CDC42-202ENST00000344548 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
CDC42-202ENST00000344548 TSHZ3Q63HK5 1081 aa16.86■□□□□ 0.29
CDC42-202ENST00000344548 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
CDC42-202ENST00000344548 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
CDC42-202ENST00000344548 VPS72Q15906 364 aa16.86■□□□□ 0.29
CDC42-202ENST00000344548 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
CDC42-202ENST00000344548 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
CDC42-202ENST00000344548 NEXNQ0ZGT2 675 aa16.85■□□□□ 0.29
CDC42-202ENST00000344548 IPO9Q96P70 1041 aaKnown RBP16.85■□□□□ 0.29
CDC42-202ENST00000344548 IL1RAPL2Q9NP60 686 aa16.85■□□□□ 0.29
CDC42-202ENST00000344548 PA2G4Q9UQ80 394 aaKnown RBP16.85■□□□□ 0.29
CDC42-202ENST00000344548 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
CDC42-202ENST00000344548 PTF1AQ7RTS3 328 aa16.85■□□□□ 0.29
CDC42-202ENST00000344548 MTX1Q13505 466 aa16.84■□□□□ 0.29
CDC42-202ENST00000344548 VSIG10Q8N0Z9 540 aa16.84■□□□□ 0.29
CDC42-202ENST00000344548 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
CDC42-202ENST00000344548 USP21Q9UK80 565 aa16.84■□□□□ 0.29
CDC42-202ENST00000344548 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
CDC42-202ENST00000344548 CYP19A1P11511 503 aaPredicted RBP16.84■□□□□ 0.29
CDC42-202ENST00000344548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
CDC42-202ENST00000344548 SPATA31A6Q5VVP1 1343 aa16.83■□□□□ 0.28
CDC42-202ENST00000344548 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
CDC42-202ENST00000344548 FAM182BQ5T319 152 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 TTC22Q5TAA0 569 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 CASP7P55210 303 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 ZBTB47Q9UFB7 747 aaPredicted RBP16.82■□□□□ 0.28
CDC42-202ENST00000344548 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
CDC42-202ENST00000344548 PDE1AP54750 535 aa16.81■□□□□ 0.28
CDC42-202ENST00000344548 AFDNP55196 1824 aaKnown RBP16.81■□□□□ 0.28
CDC42-202ENST00000344548 A0A087WZG4 1122 aa16.81■□□□□ 0.28
CDC42-202ENST00000344548 MFAP1P55081 439 aaKnown RBP16.81■□□□□ 0.28
CDC42-202ENST00000344548 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
CDC42-202ENST00000344548 STARD3NLO95772 234 aa16.8■□□□□ 0.28
CDC42-202ENST00000344548 TBC1D9Q6ZT07 1266 aa16.8■□□□□ 0.28
CDC42-202ENST00000344548 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
CDC42-202ENST00000344548 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
CDC42-202ENST00000344548 TJP1Q07157 1748 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 SDSP20132 328 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 SLC4A3P48751 1232 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 NOP58Q9Y2X3 529 aaKnown RBP16.79■□□□□ 0.28
CDC42-202ENST00000344548 MYT1Q01538 1121 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 ITPK1Q13572 414 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 HLFQ16534 295 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 ARXQ96QS3 562 aa16.79■□□□□ 0.28
CDC42-202ENST00000344548 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
CDC42-202ENST00000344548 OSBPL3Q9H4L5 887 aa16.78■□□□□ 0.28
CDC42-202ENST00000344548 H7C1W4 665 aa16.77■□□□□ 0.28
CDC42-202ENST00000344548 KCNQ4P56696 695 aa16.77■□□□□ 0.28
CDC42-202ENST00000344548 MX1P20591 662 aa16.77■□□□□ 0.27
CDC42-202ENST00000344548 AFF2P51816 1311 aa16.77■□□□□ 0.27
CDC42-202ENST00000344548 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 RAB11FIP3O75154 756 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 SASH1O94885 1247 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 SIK1P57059 783 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
CDC42-202ENST00000344548 SIL1Q9H173 461 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 FOXO4P98177 505 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
CDC42-202ENST00000344548 KIF1BPQ96EK5 621 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
CDC42-202ENST00000344548 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
CDC42-202ENST00000344548 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
CDC42-202ENST00000344548 TCIRG1Q13488 830 aa16.75■□□□□ 0.27
CDC42-202ENST00000344548 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
CDC42-202ENST00000344548 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
CDC42-202ENST00000344548 TBC1D2BQ9UPU7 963 aa16.75■□□□□ 0.27
CDC42-202ENST00000344548 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
CDC42-202ENST00000344548 EP400Q96L91 3159 aa16.75■□□□□ 0.27
CDC42-202ENST00000344548 GJD4Q96KN9 370 aaPredicted RBP16.75■□□□□ 0.27
CDC42-202ENST00000344548 STAP2Q9UGK3 403 aa16.74■□□□□ 0.27
CDC42-202ENST00000344548 MAP3K15Q6ZN16 1313 aa16.74■□□□□ 0.27
CDC42-202ENST00000344548 MYH14Q7Z406 1995 aaKnown RBP16.74■□□□□ 0.27
CDC42-202ENST00000344548 GPTP24298 496 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 OS9Q13438 667 aaPredicted RBP16.73■□□□□ 0.27
CDC42-202ENST00000344548 LMBR1LQ6UX01 489 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 CCDC191Q8NCU4 936 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 CDC45O75419 566 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 CRKLP46109 303 aaKnown RBP16.73■□□□□ 0.27
CDC42-202ENST00000344548 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
CDC42-202ENST00000344548 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 HDAC5Q9UQL6 1122 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 THSD7AQ9UPZ6 1657 aa16.73■□□□□ 0.27
CDC42-202ENST00000344548 GIGYF2Q6Y7W6 1299 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms