RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PDZRN3Q9UPQ7 1066 aa23.6■■□□□ 1.37
USF2-202ENST00000343550 SCN7AQ01118 1682 aa23.59■■□□□ 1.37
USF2-202ENST00000343550 LMNB1P20700 586 aa23.59■■□□□ 1.37
USF2-202ENST00000343550 ZNF622Q969S3 477 aaKnown RBP eCLIP23.59■■□□□ 1.37
USF2-202ENST00000343550 DLEC1Q9Y238 1755 aa23.58■■□□□ 1.36
USF2-202ENST00000343550 C16orf71Q8IYS4 520 aaPredicted RBP23.58■■□□□ 1.36
USF2-202ENST00000343550 CNBD1Q8NA66 436 aa23.58■■□□□ 1.36
USF2-202ENST00000343550 NPHP1O15259 732 aa23.57■■□□□ 1.36
USF2-202ENST00000343550 RRAGCQ9HB90 399 aa23.57■■□□□ 1.36
USF2-202ENST00000343550 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
USF2-202ENST00000343550 SBF1O95248 1867 aa23.57■■□□□ 1.36
USF2-202ENST00000343550 APLP1P51693 650 aa23.56■■□□□ 1.36
USF2-202ENST00000343550 PRELPP51888 382 aa23.56■■□□□ 1.36
USF2-202ENST00000343550 EIF4A1P60842 406 aaKnown RBP23.56■■□□□ 1.36
USF2-202ENST00000343550 CLEC4GQ6UXB4 293 aa23.56■■□□□ 1.36
USF2-202ENST00000343550 RBM46Q8TBY0 533 aaKnown RBP23.56■■□□□ 1.36
USF2-202ENST00000343550 ZC3H4Q9UPT8 1303 aaKnown RBP23.56■■□□□ 1.36
USF2-202ENST00000343550 NBPF26B4DH59 902 aa23.55■■□□□ 1.36
USF2-202ENST00000343550 NBPF10Q6P3W6 841 aaKnown RBP23.55■■□□□ 1.36
USF2-202ENST00000343550 NBPF15Q8N660 670 aa23.55■■□□□ 1.36
USF2-202ENST00000343550 TSPYL4Q9UJ04 414 aa23.55■■□□□ 1.36
USF2-202ENST00000343550 NFKBIEO00221 500 aa23.54■■□□□ 1.36
USF2-202ENST00000343550 ST5P78524 1137 aa23.54■■□□□ 1.36
USF2-202ENST00000343550 FAM9BQ8IZU0 186 aa23.54■■□□□ 1.36
USF2-202ENST00000343550 KDM3BQ7LBC6 1761 aa23.54■■□□□ 1.36
USF2-202ENST00000343550 CHL1O00533 1208 aa23.54■■□□□ 1.36
USF2-202ENST00000343550 ZNF652Q9Y2D9 606 aa23.54■■□□□ 1.36
USF2-202ENST00000343550 ANKRD31Q8N7Z5 1873 aa23.53■■□□□ 1.36
USF2-202ENST00000343550 C21orf2O43822 256 aa23.53■■□□□ 1.36
USF2-202ENST00000343550 ZNF219Q9P2Y4 722 aaPredicted RBP23.52■■□□□ 1.36
USF2-202ENST00000343550 SRGNP10124 158 aa23.51■■□□□ 1.35
USF2-202ENST00000343550 NBPF5PQ86XG9 351 aaPredicted RBP23.51■■□□□ 1.35
USF2-202ENST00000343550 CNKSR1Q969H4 720 aa23.51■■□□□ 1.35
USF2-202ENST00000343550 LAS1LQ9Y4W2 734 aaKnown RBP23.51■■□□□ 1.35
USF2-202ENST00000343550 GLTPD2A6NH11 291 aa23.5■■□□□ 1.35
USF2-202ENST00000343550 RGL2O15211 777 aa23.5■■□□□ 1.35
USF2-202ENST00000343550 FSTL1Q12841 308 aa23.5■■□□□ 1.35
USF2-202ENST00000343550 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
USF2-202ENST00000343550 STYK1Q6J9G0 422 aa23.5■■□□□ 1.35
USF2-202ENST00000343550 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
USF2-202ENST00000343550 MASTLQ96GX5 879 aa23.49■■□□□ 1.35
USF2-202ENST00000343550 CFAP44Q96MT7 982 aa23.49■■□□□ 1.35
USF2-202ENST00000343550 CCDC27Q2M243 656 aa23.49■■□□□ 1.35
USF2-202ENST00000343550 NIP7Q9Y221 180 aaKnown RBP eCLIP23.49■■□□□ 1.35
USF2-202ENST00000343550 CCER2I3L3R5 266 aa23.48■■□□□ 1.35
USF2-202ENST00000343550 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
USF2-202ENST00000343550 TPTE2Q6XPS3 522 aa23.48■■□□□ 1.35
USF2-202ENST00000343550 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
USF2-202ENST00000343550 ZNF853P0CG23 659 aa23.47■■□□□ 1.35
USF2-202ENST00000343550 PRPF40BQ6NWY9 871 aaKnown RBP23.47■■□□□ 1.35
USF2-202ENST00000343550 DNAJC5GQ8N7S2 189 aa23.47■■□□□ 1.35
USF2-202ENST00000343550 VEGFAP15692 232 aaPredicted RBP23.46■■□□□ 1.35
USF2-202ENST00000343550 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
USF2-202ENST00000343550 WWC1Q8IX03 1113 aa23.46■■□□□ 1.35
USF2-202ENST00000343550 HLFQ16534 295 aa23.45■■□□□ 1.34
USF2-202ENST00000343550 TNRC6CQ9HCJ0 1690 aaKnown RBP23.45■■□□□ 1.34
USF2-202ENST00000343550 LTBP3Q9NS15 1303 aa23.44■■□□□ 1.34
USF2-202ENST00000343550 ERFEQ4G0M1 354 aa23.44■■□□□ 1.34
USF2-202ENST00000343550 DPY19L2Q6NUT2 758 aa23.44■■□□□ 1.34
USF2-202ENST00000343550 TAOK3Q9H2K8 898 aa23.44■■□□□ 1.34
USF2-202ENST00000343550 KLRG2A4D1S0 409 aaPredicted RBP23.43■■□□□ 1.34
USF2-202ENST00000343550 GNAI1P63096 354 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 SOGA3Q5TF21 947 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 NGEFQ8N5V2 710 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 SMC1BQ8NDV3 1235 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 MBIPQ9NS73 344 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 IFT57Q9NWB7 429 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 FAM177BA6PVY3 158 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 NPR1P16066 1061 aa23.43■■□□□ 1.34
USF2-202ENST00000343550 KRT24Q2M2I5 525 aa23.42■■□□□ 1.34
USF2-202ENST00000343550 SALL2Q9Y467 1007 aaPredicted RBP23.42■■□□□ 1.34
USF2-202ENST00000343550 SLX4Q8IY92 1834 aa23.42■■□□□ 1.34
USF2-202ENST00000343550 CCDC88AQ3V6T2 1871 aa23.41■■□□□ 1.34
USF2-202ENST00000343550 ERVV-1B6SEH8 477 aa23.41■■□□□ 1.34
USF2-202ENST00000343550 C7orf43Q8WVR3 580 aa23.41■■□□□ 1.34
USF2-202ENST00000343550 GTF2E1P29083 439 aaPredicted RBP23.4■■□□□ 1.34
USF2-202ENST00000343550 MIER1Q8N108 512 aa23.4■■□□□ 1.34
USF2-202ENST00000343550 FER1L6Q2WGJ9 1857 aa23.4■■□□□ 1.34
USF2-202ENST00000343550 TIAM2Q8IVF5 1701 aa23.4■■□□□ 1.34
USF2-202ENST00000343550 EIF2S2P20042 333 aaKnown RBP23.39■■□□□ 1.34
USF2-202ENST00000343550 HTRA3P83110 453 aa23.39■■□□□ 1.34
USF2-202ENST00000343550 MAP3K15Q6ZN16 1313 aa23.39■■□□□ 1.33
USF2-202ENST00000343550 LAMB4A4D0S4 1761 aa23.39■■□□□ 1.33
USF2-202ENST00000343550 POTECB2RU33 542 aa23.38■■□□□ 1.33
USF2-202ENST00000343550 MYL6BP14649 208 aa23.38■■□□□ 1.33
USF2-202ENST00000343550 KIF6Q6ZMV9 814 aa23.38■■□□□ 1.33
USF2-202ENST00000343550 TTLL7Q6ZT98 887 aa23.38■■□□□ 1.33
USF2-202ENST00000343550 CCDC93Q567U6 631 aa23.37■■□□□ 1.33
USF2-202ENST00000343550 NYXQ9GZU5 481 aa23.37■■□□□ 1.33
USF2-202ENST00000343550 PDIA6Q15084 440 aa23.36■■□□□ 1.33
USF2-202ENST00000343550 WDR63Q8IWG1 891 aa23.36■■□□□ 1.33
USF2-202ENST00000343550 IL16Q14005 1332 aa23.36■■□□□ 1.33
USF2-202ENST00000343550 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
USF2-202ENST00000343550 WDR90Q96KV7 1748 aa23.35■■□□□ 1.33
USF2-202ENST00000343550 ALDH1B1P30837 517 aa23.35■■□□□ 1.33
USF2-202ENST00000343550 DUSP27Q5VZP5 1158 aa23.35■■□□□ 1.33
USF2-202ENST00000343550 ZBTB3Q9H5J0 574 aa23.35■■□□□ 1.33
USF2-202ENST00000343550 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
USF2-202ENST00000343550 HOXB7P09629 217 aa23.34■■□□□ 1.33
USF2-202ENST00000343550 IFFO2Q5TF58 517 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms