RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 TTC14Q96N46 770 aa11.91□□□□□ -0.5
UBE2D3-203ENST00000343106 STX6O43752 255 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 PTMAP06454 111 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 SUCLG2Q96I99 432 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 FAM227BQ96M60 508 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 SLIT1O75093 1534 aa11.9□□□□□ -0.5
UBE2D3-203ENST00000343106 HOXB7P09629 217 aa11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 ZSCAN22P10073 491 aaPredicted RBP11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 BOLA2Q9H3K6 86 aa11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 BICC1Q9H694 974 aaKnown RBP11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.51
UBE2D3-203ENST00000343106 RPAP1Q9BWH6 1393 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 AMOTQ4VCS5 1084 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 TCEANC2Q96MN5 208 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 GJB2P29033 226 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 RIC3Q7Z5B4 369 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 RUFY2Q8WXA3 655 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
UBE2D3-203ENST00000343106 VPS37CA5D8V6 355 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-203ENST00000343106 CHMP4AQ9BY43 222 aa11.88□□□□□ -0.51
UBE2D3-203ENST00000343106 CHMP3Q9Y3E7 222 aa11.88□□□□□ -0.51
UBE2D3-203ENST00000343106 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
UBE2D3-203ENST00000343106 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
UBE2D3-203ENST00000343106 GRM8O00222 908 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 OFD1O75665 1012 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 SASH1O94885 1247 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 ARHGEF25Q86VW2 580 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 IL17RAQ96F46 866 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 CCDC9Q9Y3X0 531 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 XRN1Q8IZH2 1706 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 NMIQ13287 307 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 EDC3Q96F86 508 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 ZNF830Q96NB3 372 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 RBM8AQ9Y5S9 174 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 FMN2Q9NZ56 1722 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 KIF13AQ9H1H9 1805 aa11.87□□□□□ -0.51
UBE2D3-203ENST00000343106 ALDH1L1O75891 902 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 F13A1P00488 732 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 ME3Q16798 604 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 EVI5LQ96CN4 794 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 EPB41L2O43491 1005 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 PHF14O94880 888 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 RBM10P98175 930 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 MTX1Q13505 466 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 LINS1Q8NG48 757 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 FSD1Q9BTV5 496 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 USP25Q9UHP3 1055 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
UBE2D3-203ENST00000343106 DDX58O95786 925 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 HCLS1P14317 486 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 CREB3L3Q68CJ9 461 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 GIMAP6Q6P9H5 292 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 CCDC39Q9UFE4 941 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 A0A0D9SFI3 127 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 STK3Q13188 491 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 CCDC183Q5T5S1 534 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 VPS53Q5VIR6 699 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 MYD88Q99836 296 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 ZSWIM6Q9HCJ5 1215 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 PXDNQ92626 1479 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 CCDC171Q6TFL3 1326 aa11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
UBE2D3-203ENST00000343106 LRRC37A3O60309 1634 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 UBE2HP62256 183 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 PDIA6Q15084 440 aa11.84□□□□□ -0.51
UBE2D3-203ENST00000343106 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms