RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 CLEC4GQ6UXB4 293 aa22.48■■□□□ 1.19
BRCC3-202ENST00000340647 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
BRCC3-202ENST00000340647 SETDB2Q96T68 719 aa22.48■■□□□ 1.19
BRCC3-202ENST00000340647 FER1L6Q2WGJ9 1857 aa22.47■■□□□ 1.19
BRCC3-202ENST00000340647 TTLL7Q6ZT98 887 aa22.47■■□□□ 1.19
BRCC3-202ENST00000340647 BRIP1Q9BX63 1249 aa22.47■■□□□ 1.19
BRCC3-202ENST00000340647 PDIA6Q15084 440 aa22.46■■□□□ 1.19
BRCC3-202ENST00000340647 NEUROD2Q15784 382 aa22.46■■□□□ 1.19
BRCC3-202ENST00000340647 TSPYL4Q9UJ04 414 aa22.46■■□□□ 1.19
BRCC3-202ENST00000340647 RGL2O15211 777 aa22.45■■□□□ 1.18
BRCC3-202ENST00000340647 H0YIN7 160 aa22.44■■□□□ 1.18
BRCC3-202ENST00000340647 KRT24Q2M2I5 525 aa22.44■■□□□ 1.18
BRCC3-202ENST00000340647 C9orf131Q5VYM1 1079 aa22.44■■□□□ 1.18
BRCC3-202ENST00000340647 TNRC6CQ9HCJ0 1690 aaKnown RBP22.44■■□□□ 1.18
BRCC3-202ENST00000340647 BABAM1Q9NWV8 329 aa22.44■■□□□ 1.18
BRCC3-202ENST00000340647 CHL1O00533 1208 aa22.43■■□□□ 1.18
BRCC3-202ENST00000340647 RASSF7Q02833 373 aa22.43■■□□□ 1.18
BRCC3-202ENST00000340647 NGEFQ8N5V2 710 aa22.43■■□□□ 1.18
BRCC3-202ENST00000340647 TTLL6Q8N841 843 aa22.43■■□□□ 1.18
BRCC3-202ENST00000340647 CNBD1Q8NA66 436 aa22.43■■□□□ 1.18
BRCC3-202ENST00000340647 DICER1Q9UPY3 1922 aaKnown RBP22.42■■□□□ 1.18
BRCC3-202ENST00000340647 WDR43Q15061 677 aaKnown RBP eCLIP22.42■■□□□ 1.18
BRCC3-202ENST00000340647 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
BRCC3-202ENST00000340647 NPM2Q86SE8 214 aaKnown RBP22.42■■□□□ 1.18
BRCC3-202ENST00000340647 KLRG2A4D1S0 409 aaPredicted RBP22.41■■□□□ 1.18
BRCC3-202ENST00000340647 MYL6BP14649 208 aa22.41■■□□□ 1.18
BRCC3-202ENST00000340647 PDE6BP35913 854 aa22.41■■□□□ 1.18
BRCC3-202ENST00000340647 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
BRCC3-202ENST00000340647 NIP7Q9Y221 180 aaKnown RBP eCLIP22.41■■□□□ 1.18
BRCC3-202ENST00000340647 MAP3K15Q6ZN16 1313 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 ERVV-1B6SEH8 477 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 NFKBIEO00221 500 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 ANXA1P04083 346 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 SRGNP10124 158 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 ZNF652Q9Y2D9 606 aa22.4■■□□□ 1.18
BRCC3-202ENST00000340647 NBPF5PQ86XG9 351 aaPredicted RBP22.39■■□□□ 1.17
BRCC3-202ENST00000340647 ERBB4Q15303 1308 aa22.38■■□□□ 1.17
BRCC3-202ENST00000340647 UBN2Q6ZU65 1347 aa22.38■■□□□ 1.17
BRCC3-202ENST00000340647 TIAM2Q8IVF5 1701 aa22.38■■□□□ 1.17
BRCC3-202ENST00000340647 ZNF622Q969S3 477 aaKnown RBP eCLIP22.38■■□□□ 1.17
BRCC3-202ENST00000340647 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
BRCC3-202ENST00000340647 APAF1O14727 1248 aa22.37■■□□□ 1.17
BRCC3-202ENST00000340647 EIF2S2P20042 333 aaKnown RBP22.37■■□□□ 1.17
BRCC3-202ENST00000340647 RNF181Q9P0P0 153 aa22.37■■□□□ 1.17
BRCC3-202ENST00000340647 PDZRN3Q9UPQ7 1066 aa22.37■■□□□ 1.17
BRCC3-202ENST00000340647 ABCC12Q96J65 1359 aa22.37■■□□□ 1.17
BRCC3-202ENST00000340647 FAM177BA6PVY3 158 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 ZNF853P0CG23 659 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 ST5P78524 1137 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 C7orf43Q8WVR3 580 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 ZBTB3Q9H5J0 574 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 NMRK2Q9NPI5 230 aa22.36■■□□□ 1.17
BRCC3-202ENST00000340647 C21orf2O43822 256 aa22.35■■□□□ 1.17
BRCC3-202ENST00000340647 TOMM70O94826 608 aa22.35■■□□□ 1.17
BRCC3-202ENST00000340647 STYK1Q6J9G0 422 aa22.35■■□□□ 1.17
BRCC3-202ENST00000340647 DNAJC5GQ8N7S2 189 aa22.35■■□□□ 1.17
BRCC3-202ENST00000340647 TPTE2Q6XPS3 522 aa22.34■■□□□ 1.17
BRCC3-202ENST00000340647 NECTIN2Q92692 538 aa22.34■■□□□ 1.17
BRCC3-202ENST00000340647 MASTLQ96GX5 879 aa22.34■■□□□ 1.17
BRCC3-202ENST00000340647 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
BRCC3-202ENST00000340647 GPTP24298 496 aa22.33■■□□□ 1.17
BRCC3-202ENST00000340647 APLP1P51693 650 aa22.33■■□□□ 1.17
BRCC3-202ENST00000340647 SUSD4Q5VX71 490 aa22.33■■□□□ 1.17
BRCC3-202ENST00000340647 PRPF40BQ6NWY9 871 aaKnown RBP22.33■■□□□ 1.17
BRCC3-202ENST00000340647 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.17
BRCC3-202ENST00000340647 NUTM1Q86Y26 1132 aa22.33■■□□□ 1.17
BRCC3-202ENST00000340647 ZNF219Q9P2Y4 722 aaPredicted RBP22.33■■□□□ 1.17
BRCC3-202ENST00000340647 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
BRCC3-202ENST00000340647 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
BRCC3-202ENST00000340647 LAMB2P55268 1798 aa22.32■■□□□ 1.16
BRCC3-202ENST00000340647 LMNB1P20700 586 aa22.31■■□□□ 1.16
BRCC3-202ENST00000340647 ERFEQ4G0M1 354 aa22.31■■□□□ 1.16
BRCC3-202ENST00000340647 KIF6Q6ZMV9 814 aa22.31■■□□□ 1.16
BRCC3-202ENST00000340647 CNKSR1Q969H4 720 aa22.31■■□□□ 1.16
BRCC3-202ENST00000340647 MBIPQ9NS73 344 aa22.31■■□□□ 1.16
BRCC3-202ENST00000340647 SNED1Q8TER0 1413 aa22.31■■□□□ 1.16
BRCC3-202ENST00000340647 IBTKQ9P2D0 1353 aaPredicted RBP22.3■■□□□ 1.16
BRCC3-202ENST00000340647 NTSR2O95665 410 aa22.3■■□□□ 1.16
BRCC3-202ENST00000340647 CRY2Q49AN0 593 aa22.3■■□□□ 1.16
BRCC3-202ENST00000340647 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
BRCC3-202ENST00000340647 NPHP1O15259 732 aa22.29■■□□□ 1.16
BRCC3-202ENST00000340647 NPR1P16066 1061 aa22.29■■□□□ 1.16
BRCC3-202ENST00000340647 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
BRCC3-202ENST00000340647 COPS6Q7L5N1 327 aa22.29■■□□□ 1.16
BRCC3-202ENST00000340647 SLC51AQ86UW1 340 aa22.29■■□□□ 1.16
BRCC3-202ENST00000340647 DDX21Q9NR30 783 aaKnown RBP eCLIP22.29■■□□□ 1.16
BRCC3-202ENST00000340647 RIC1Q4ADV7 1423 aa22.29■■□□□ 1.16
BRCC3-202ENST00000340647 XAGE3Q8WTP9 111 aa22.28■■□□□ 1.16
BRCC3-202ENST00000340647 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
BRCC3-202ENST00000340647 LTBP3Q9NS15 1303 aa22.28■■□□□ 1.16
BRCC3-202ENST00000340647 TAF1P21675 1872 aa22.26■■□□□ 1.15
BRCC3-202ENST00000340647 DUSP27Q5VZP5 1158 aa22.26■■□□□ 1.15
BRCC3-202ENST00000340647 ZC3H4Q9UPT8 1303 aaKnown RBP22.26■■□□□ 1.15
BRCC3-202ENST00000340647 HOXB7P09629 217 aa22.25■■□□□ 1.15
BRCC3-202ENST00000340647 NYXQ9GZU5 481 aa22.25■■□□□ 1.15
BRCC3-202ENST00000340647 WDR90Q96KV7 1748 aa22.25■■□□□ 1.15
BRCC3-202ENST00000340647 DDX60Q8IY21 1712 aaKnown RBP22.24■■□□□ 1.15
BRCC3-202ENST00000340647 POTECB2RU33 542 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms